Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 AL360271.2-201ENST00000447710 161 ntBASIC3.16□□□□□ -1.9
RAB40AQ8WXH6 RPS15AP27-201ENST00000449183 343 ntBASIC3.16□□□□□ -1.9
RAB40AQ8WXH6 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.16□□□□□ -1.9
RAB40AQ8WXH6 MTND3P16-201ENST00000452205 344 ntBASIC3.16□□□□□ -1.9
RAB40AQ8WXH6 AL031183.1-201ENST00000457667 207 ntBASIC3.16□□□□□ -1.9
RAB40AQ8WXH6 AC022493.1-201ENST00000492984 337 ntBASIC3.16□□□□□ -1.9
RAB40AQ8WXH6 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RAB40AQ8WXH6 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.16□□□□□ -1.9
RAB40AQ8WXH6 AC008716.1-201ENST00000511084 513 ntBASIC3.16□□□□□ -1.9
RAB40AQ8WXH6 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.16□□□□□ -1.9
RAB40AQ8WXH6 RNU1-103P-201ENST00000516502 125 ntBASIC3.16□□□□□ -1.9
RAB40AQ8WXH6 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.16□□□□□ -1.9
RAB40AQ8WXH6 RNU6-572P-201ENST00000516724 80 ntBASIC3.16□□□□□ -1.9
RAB40AQ8WXH6 SNORA31.19-201ENST00000517079 126 ntBASIC3.16□□□□□ -1.9
RAB40AQ8WXH6 AC022695.1-201ENST00000522089 237 ntBASIC3.16□□□□□ -1.9
RAB40AQ8WXH6 AP006245.1-201ENST00000522549 120 ntBASIC3.16□□□□□ -1.9
RAB40AQ8WXH6 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.16□□□□□ -1.9
RAB40AQ8WXH6 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RAB40AQ8WXH6 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.16□□□□□ -1.9
RAB40AQ8WXH6 AL391261.3-201ENST00000557194 520 ntBASIC3.16□□□□□ -1.9
RAB40AQ8WXH6 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.16□□□□□ -1.9
RAB40AQ8WXH6 AC087499.8-201ENST00000578406 226 ntBASIC3.16□□□□□ -1.9
RAB40AQ8WXH6 MIR4801-201ENST00000582704 82 ntBASIC3.16□□□□□ -1.9
RAB40AQ8WXH6 MIR4424-201ENST00000585257 86 ntBASIC3.16□□□□□ -1.9
RAB40AQ8WXH6 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.16□□□□□ -1.9
RAB40AQ8WXH6 AC007938.3-201ENST00000604965 623 ntBASIC3.16□□□□□ -1.9
RAB40AQ8WXH6 U2.21-201ENST00000637295 81 ntBASIC3.16□□□□□ -1.9
RAB40AQ8WXH6 U6.99-201ENST00000637524 83 ntBASIC3.16□□□□□ -1.9
RAB40AQ8WXH6 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
RAB40AQ8WXH6 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
RAB40AQ8WXH6 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 MIR30E-201ENST00000362104 92 ntBASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 RNU6-778P-201ENST00000363269 103 ntBASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 RNU6-371P-201ENST00000364283 108 ntBASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 Y_RNA.231-201ENST00000364358 102 ntBASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 RNU4-20P-201ENST00000365601 151 ntBASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 AP002088.1-201ENST00000382740 395 ntBASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 RNU6-434P-201ENST00000384376 107 ntBASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 RNU6-45P-201ENST00000384471 107 ntBASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 RNA5SP31-201ENST00000411144 127 ntBASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 BX323014.1-201ENST00000412876 237 ntBASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 NDUFS5P4-201ENST00000412983 318 ntBASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 AL353729.1-201ENST00000425044 720 ntBASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 SKA2P1-201ENST00000425592 390 ntBASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 AL669831.1-202ENST00000428504 417 ntBASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 MYL8P-204ENST00000431574 518 ntBASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 HIGD1AP11-201ENST00000438361 280 ntBASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 GTF2IP13-201ENST00000438487 386 ntBASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 AC092798.1-201ENST00000458542 409 ntBASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 RPL21P99-201ENST00000480369 423 ntBASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 AC091885.1-201ENST00000506658 268 ntBASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 SLC25A15P5-201ENST00000508033 253 ntBASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 HMGN1P11-201ENST00000508668 303 ntBASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 SNORD59.2-201ENST00000516873 68 ntBASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 SCARNA14-201ENST00000516903 136 ntBASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 TRMT10BP1-201ENST00000519377 943 ntBASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 AL133241.1-201ENST00000556832 487 ntBASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 MIR5187-201ENST00000583479 76 ntBASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 MTND4LP5-201ENST00000605152 292 ntBASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 AL121772.2-201ENST00000614331 297 ntBASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 AC022149.2-201ENST00000621061 203 ntBASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 AC039056.2-201ENST00000622261 511 ntBASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 AC024614.3-201ENST00000637860 256 ntBASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 AC004520.1-201ENST00000608362 1413 ntBASIC3.15□□□□□ -1.91
RAB40AQ8WXH6 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 MIR412-201ENST00000362142 91 ntBASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 RNU6-805P-201ENST00000365643 106 ntBASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 SNORA75B-201ENST00000384053 137 ntBASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 RNU6-38P-201ENST00000384085 107 ntBASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 MIR514A2-201ENST00000385131 88 ntBASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 MIR514A3-201ENST00000385132 88 ntBASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 SNORA40C-201ENST00000391285 128 ntBASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 EI24P2-201ENST00000397776 1076 ntBASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 U3.39-201ENST00000408569 239 ntBASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 RNU6-373P-201ENST00000411247 98 ntBASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 RAB9AP3-201ENST00000412737 573 ntBASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 HSPE1P1-201ENST00000421494 318 ntBASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 HMGB1P9-201ENST00000429856 646 ntBASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 AL121601.2-201ENST00000438019 707 ntBASIC3.14□□□□□ -1.91
RAB40AQ8WXH6 AL078601.1-201ENST00000444542 271 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms