Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 OR6K1P-201ENST00000456766 971 ntBASIC3.15□□□□□ -1.91
SNED1Q8TER0 MTCO1P42-201ENST00000457379 726 ntBASIC3.15□□□□□ -1.91
SNED1Q8TER0 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.15□□□□□ -1.91
SNED1Q8TER0 AL049830.2-201ENST00000480072 201 ntBASIC3.15□□□□□ -1.91
SNED1Q8TER0 MTND1P3-201ENST00000484956 952 ntBASIC3.15□□□□□ -1.91
SNED1Q8TER0 AC007182.2-201ENST00000489251 402 ntBASIC3.15□□□□□ -1.91
SNED1Q8TER0 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
SNED1Q8TER0 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.15□□□□□ -1.91
SNED1Q8TER0 RN7SKP24-201ENST00000515888 284 ntBASIC3.15□□□□□ -1.91
SNED1Q8TER0 AL359212.1-201ENST00000556608 614 ntBASIC3.15□□□□□ -1.91
SNED1Q8TER0 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.15□□□□□ -1.91
SNED1Q8TER0 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.15□□□□□ -1.91
SNED1Q8TER0 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.15□□□□□ -1.91
SNED1Q8TER0 AC010620.2-201ENST00000600135 313 ntBASIC3.15□□□□□ -1.91
SNED1Q8TER0 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.15□□□□□ -1.91
SNED1Q8TER0 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.15□□□□□ -1.91
SNED1Q8TER0 AC009268.2-201ENST00000621925 457 ntBASIC3.15□□□□□ -1.91
SNED1Q8TER0 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.15□□□□□ -1.91
SNED1Q8TER0 MIR3662-201ENST00000637030 95 ntBASIC3.15□□□□□ -1.91
SNED1Q8TER0 AC006378.2-201ENST00000623178 2476 ntBASIC3.15□□□□□ -1.91
SNED1Q8TER0 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.15□□□□□ -1.91
SNED1Q8TER0 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
SNED1Q8TER0 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SNED1Q8TER0 U8.3-201ENST00000363321 132 ntBASIC3.14□□□□□ -1.91
SNED1Q8TER0 Y_RNA.263-201ENST00000364659 114 ntBASIC3.14□□□□□ -1.91
SNED1Q8TER0 Y_RNA.356-201ENST00000365475 113 ntBASIC3.14□□□□□ -1.91
SNED1Q8TER0 Y_RNA.493-201ENST00000384422 102 ntBASIC3.14□□□□□ -1.91
SNED1Q8TER0 MIR1289-2-201ENST00000408360 111 ntBASIC3.14□□□□□ -1.91
SNED1Q8TER0 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SNED1Q8TER0 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.14□□□□□ -1.91
SNED1Q8TER0 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.14□□□□□ -1.91
SNED1Q8TER0 AC104850.1-201ENST00000435940 476 ntBASIC3.14□□□□□ -1.91
SNED1Q8TER0 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.14□□□□□ -1.91
SNED1Q8TER0 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.14□□□□□ -1.91
SNED1Q8TER0 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.14□□□□□ -1.91
SNED1Q8TER0 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.14□□□□□ -1.91
SNED1Q8TER0 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.14□□□□□ -1.91
SNED1Q8TER0 HMGB1P15-201ENST00000453854 435 ntBASIC3.14□□□□□ -1.91
SNED1Q8TER0 PMCHL2-203ENST00000457791 237 ntBASIC3.14□□□□□ -1.91
SNED1Q8TER0 RBM43P1-201ENST00000476891 1081 ntBASIC3.14□□□□□ -1.91
SNED1Q8TER0 HMGB1P22-201ENST00000505315 124 ntBASIC3.14□□□□□ -1.91
SNED1Q8TER0 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.14□□□□□ -1.91
SNED1Q8TER0 AC006499.2-201ENST00000513470 337 ntBASIC3.14□□□□□ -1.91
SNED1Q8TER0 Y_RNA.693-201ENST00000516641 110 ntBASIC3.14□□□□□ -1.91
SNED1Q8TER0 RNU2-46P-201ENST00000517038 113 ntBASIC3.14□□□□□ -1.91
SNED1Q8TER0 AP003467.2-201ENST00000520175 319 ntBASIC3.14□□□□□ -1.91
SNED1Q8TER0 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.14□□□□□ -1.91
SNED1Q8TER0 AL133271.1-201ENST00000538229 291 ntBASIC3.14□□□□□ -1.91
SNED1Q8TER0 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.14□□□□□ -1.91
SNED1Q8TER0 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.14□□□□□ -1.91
SNED1Q8TER0 MIR4648-201ENST00000580107 72 ntBASIC3.14□□□□□ -1.91
SNED1Q8TER0 NRBF2P1-201ENST00000587407 859 ntBASIC3.14□□□□□ -1.91
SNED1Q8TER0 AP001029.3-201ENST00000588063 596 ntBASIC3.14□□□□□ -1.91
SNED1Q8TER0 TPMTP1-201ENST00000592307 737 ntBASIC3.14□□□□□ -1.91
SNED1Q8TER0 AC012507.3-201ENST00000603556 477 ntBASIC3.14□□□□□ -1.91
SNED1Q8TER0 AC103810.6-201ENST00000606708 136 ntBASIC3.14□□□□□ -1.91
SNED1Q8TER0 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SNED1Q8TER0 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.13□□□□□ -1.91
SNED1Q8TER0 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SNED1Q8TER0 AC006026.1-201ENST00000444025 1803 ntBASIC3.13□□□□□ -1.91
SNED1Q8TER0 SNORD56.2-201ENST00000363242 71 ntBASIC3.13□□□□□ -1.91
SNED1Q8TER0 RNU6-289P-201ENST00000364093 107 ntBASIC3.13□□□□□ -1.91
SNED1Q8TER0 RNU6-777P-201ENST00000364265 104 ntBASIC3.13□□□□□ -1.91
SNED1Q8TER0 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.13□□□□□ -1.91
SNED1Q8TER0 RNU6-1103P-201ENST00000384150 107 ntBASIC3.13□□□□□ -1.91
SNED1Q8TER0 AL356057.2-201ENST00000403318 432 ntBASIC3.13□□□□□ -1.91
SNED1Q8TER0 AL590004.2-201ENST00000404787 371 ntBASIC3.13□□□□□ -1.91
SNED1Q8TER0 AL356776.1-201ENST00000406574 447 ntBASIC3.13□□□□□ -1.91
SNED1Q8TER0 MIR1305-201ENST00000408300 86 ntBASIC3.13□□□□□ -1.91
SNED1Q8TER0 RNA5SP425-201ENST00000410336 112 ntBASIC3.13□□□□□ -1.91
SNED1Q8TER0 RNU4-78P-201ENST00000410940 126 ntBASIC3.13□□□□□ -1.91
SNED1Q8TER0 AL513477.1-202ENST00000417061 214 ntBASIC3.13□□□□□ -1.91
SNED1Q8TER0 TOMM22P1-201ENST00000418578 312 ntBASIC3.13□□□□□ -1.91
SNED1Q8TER0 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.13□□□□□ -1.91
SNED1Q8TER0 AL513185.2-201ENST00000425543 193 ntBASIC3.13□□□□□ -1.91
SNED1Q8TER0 HMGN2P20-201ENST00000437531 273 ntBASIC3.13□□□□□ -1.91
SNED1Q8TER0 RPL22P17-201ENST00000438729 315 ntBASIC3.13□□□□□ -1.91
SNED1Q8TER0 RPL23AP16-201ENST00000441715 421 ntBASIC3.13□□□□□ -1.91
SNED1Q8TER0 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.13□□□□□ -1.91
SNED1Q8TER0 RPS20P24-201ENST00000457473 361 ntBASIC3.13□□□□□ -1.91
SNED1Q8TER0 AC010285.1-201ENST00000470580 392 ntBASIC3.13□□□□□ -1.91
SNED1Q8TER0 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.13□□□□□ -1.91
SNED1Q8TER0 AC006390.1-201ENST00000508068 283 ntBASIC3.13□□□□□ -1.91
SNED1Q8TER0 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.13□□□□□ -1.91
SNED1Q8TER0 SNORA9.3-201ENST00000516383 129 ntBASIC3.13□□□□□ -1.91
SNED1Q8TER0 RNU6-1153P-201ENST00000516760 105 ntBASIC3.13□□□□□ -1.91
SNED1Q8TER0 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.13□□□□□ -1.91
SNED1Q8TER0 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.13□□□□□ -1.91
SNED1Q8TER0 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.13□□□□□ -1.91
SNED1Q8TER0 CENPUP1-201ENST00000526649 1202 ntBASIC3.13□□□□□ -1.91
SNED1Q8TER0 AP000790.1-201ENST00000528891 737 ntBASIC3.13□□□□□ -1.91
SNED1Q8TER0 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SNED1Q8TER0 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.13□□□□□ -1.91
SNED1Q8TER0 AC055876.1-202ENST00000567053 138 ntBASIC3.13□□□□□ -1.91
SNED1Q8TER0 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.13□□□□□ -1.91
SNED1Q8TER0 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.13□□□□□ -1.91
SNED1Q8TER0 AC245014.2-201ENST00000603689 287 ntBASIC3.13□□□□□ -1.91
SNED1Q8TER0 AL359999.1-201ENST00000604513 294 ntBASIC3.13□□□□□ -1.91
SNED1Q8TER0 AC246785.4-201ENST00000605374 287 ntBASIC3.13□□□□□ -1.91
SNED1Q8TER0 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 600.9 ms