Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NKX2-3Q8TAU0 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NKX2-3Q8TAU0 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
NKX2-3Q8TAU0 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NKX2-3Q8TAU0 RNU6-227P-201ENST00000362865 103 ntBASIC5.74□□□□□ -1.49
NKX2-3Q8TAU0 RNU6-76P-201ENST00000384060 104 ntBASIC5.74□□□□□ -1.49
NKX2-3Q8TAU0 BX510359.2-201ENST00000417920 305 ntBASIC5.74□□□□□ -1.49
NKX2-3Q8TAU0 WARS2P1-201ENST00000429678 537 ntBASIC5.74□□□□□ -1.49
NKX2-3Q8TAU0 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC5.74□□□□□ -1.49
NKX2-3Q8TAU0 RNU6-168P-201ENST00000516189 101 ntBASIC5.74□□□□□ -1.49
NKX2-3Q8TAU0 RNU6-589P-201ENST00000516485 107 ntBASIC5.74□□□□□ -1.49
NKX2-3Q8TAU0 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.74□□□□□ -1.49
NKX2-3Q8TAU0 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC5.74□□□□□ -1.49
NKX2-3Q8TAU0 AP001880.2-201ENST00000538233 448 ntBASIC5.74□□□□□ -1.49
NKX2-3Q8TAU0 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.74□□□□□ -1.49
NKX2-3Q8TAU0 TRAV37-201ENST00000553906 342 ntBASIC5.74□□□□□ -1.49
NKX2-3Q8TAU0 MIR4716-201ENST00000579628 84 ntBASIC5.74□□□□□ -1.49
NKX2-3Q8TAU0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC5.74□□□□□ -1.49
NKX2-3Q8TAU0 MIR6129-201ENST00000616087 109 ntBASIC5.74□□□□□ -1.49
NKX2-3Q8TAU0 BX005214.3-202ENST00000619809 325 ntBASIC5.74□□□□□ -1.49
NKX2-3Q8TAU0 AC138965.3-201ENST00000623875 498 ntBASIC5.74□□□□□ -1.49
NKX2-3Q8TAU0 snoU18.1-201ENST00000629629 71 ntBASIC5.74□□□□□ -1.49
NKX2-3Q8TAU0 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NKX2-3Q8TAU0 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NKX2-3Q8TAU0 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
NKX2-3Q8TAU0 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
NKX2-3Q8TAU0 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
NKX2-3Q8TAU0 AC004656.1-201ENST00000568479 4951 ntBASIC5.74□□□□□ -1.49
NKX2-3Q8TAU0 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.73□□□□□ -1.49
NKX2-3Q8TAU0 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NKX2-3Q8TAU0 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.73□□□□□ -1.49
NKX2-3Q8TAU0 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NKX2-3Q8TAU0 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.73□□□□□ -1.49
NKX2-3Q8TAU0 RNU6-626P-201ENST00000363354 107 ntBASIC5.73□□□□□ -1.49
NKX2-3Q8TAU0 SNORA20-201ENST00000384662 132 ntBASIC5.73□□□□□ -1.49
NKX2-3Q8TAU0 SNORD12B-201ENST00000410433 91 ntBASIC5.73□□□□□ -1.49
NKX2-3Q8TAU0 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NKX2-3Q8TAU0 IFNA11P-201ENST00000446352 526 ntBASIC5.73□□□□□ -1.49
NKX2-3Q8TAU0 EEF1B2P7-201ENST00000451177 676 ntBASIC5.73□□□□□ -1.49
NKX2-3Q8TAU0 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.73□□□□□ -1.49
NKX2-3Q8TAU0 AC022493.1-201ENST00000492984 337 ntBASIC5.73□□□□□ -1.49
NKX2-3Q8TAU0 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC5.73□□□□□ -1.49
NKX2-3Q8TAU0 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.73□□□□□ -1.49
NKX2-3Q8TAU0 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.73□□□□□ -1.49
NKX2-3Q8TAU0 AC026402.1-201ENST00000513642 170 ntBASIC5.73□□□□□ -1.49
NKX2-3Q8TAU0 AC133555.2-201ENST00000550213 292 ntBASIC5.73□□□□□ -1.49
NKX2-3Q8TAU0 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.73□□□□□ -1.49
NKX2-3Q8TAU0 OR4H12P-201ENST00000556269 907 ntBASIC5.73□□□□□ -1.49
NKX2-3Q8TAU0 MIR5582-201ENST00000579697 68 ntBASIC5.73□□□□□ -1.49
NKX2-3Q8TAU0 AC060766.3-201ENST00000591442 263 ntBASIC5.73□□□□□ -1.49
NKX2-3Q8TAU0 MIR6716-201ENST00000613413 80 ntBASIC5.73□□□□□ -1.49
NKX2-3Q8TAU0 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NKX2-3Q8TAU0 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NKX2-3Q8TAU0 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.73□□□□□ -1.49
NKX2-3Q8TAU0 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NKX2-3Q8TAU0 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
NKX2-3Q8TAU0 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NKX2-3Q8TAU0 A2MP1-204ENST00000566278 4130 ntBASIC5.73□□□□□ -1.49
NKX2-3Q8TAU0 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.73□□□□□ -1.49
NKX2-3Q8TAU0 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.73□□□□□ -1.49
NKX2-3Q8TAU0 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NKX2-3Q8TAU0 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
NKX2-3Q8TAU0 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NKX2-3Q8TAU0 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
NKX2-3Q8TAU0 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.72□□□□□ -1.49
NKX2-3Q8TAU0 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.72□□□□□ -1.49
NKX2-3Q8TAU0 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NKX2-3Q8TAU0 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NKX2-3Q8TAU0 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NKX2-3Q8TAU0 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
NKX2-3Q8TAU0 RNU6-222P-201ENST00000362438 107 ntBASIC5.72□□□□□ -1.49
NKX2-3Q8TAU0 RNU6-741P-201ENST00000383889 107 ntBASIC5.72□□□□□ -1.49
NKX2-3Q8TAU0 Y_RNA.420-201ENST00000384043 110 ntBASIC5.72□□□□□ -1.49
NKX2-3Q8TAU0 RNU6-17P-201ENST00000384245 107 ntBASIC5.72□□□□□ -1.49
NKX2-3Q8TAU0 RNU6-18P-201ENST00000384527 107 ntBASIC5.72□□□□□ -1.49
NKX2-3Q8TAU0 CYP4F29P-201ENST00000420685 446 ntBASIC5.72□□□□□ -1.49
NKX2-3Q8TAU0 RPL30P3-201ENST00000424262 333 ntBASIC5.72□□□□□ -1.49
NKX2-3Q8TAU0 AL358472.1-201ENST00000431295 329 ntBASIC5.72□□□□□ -1.49
NKX2-3Q8TAU0 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC5.72□□□□□ -1.49
NKX2-3Q8TAU0 SCARNA22-201ENST00000503991 125 ntBASIC5.72□□□□□ -1.49
NKX2-3Q8TAU0 FCF1P8-201ENST00000510322 597 ntBASIC5.72□□□□□ -1.49
NKX2-3Q8TAU0 RN7SKP276-201ENST00000516242 268 ntBASIC5.72□□□□□ -1.49
NKX2-3Q8TAU0 AC103996.1-201ENST00000555468 102 ntBASIC5.72□□□□□ -1.49
NKX2-3Q8TAU0 MIR1273C-201ENST00000578669 77 ntBASIC5.72□□□□□ -1.49
NKX2-3Q8TAU0 MIR4431-201ENST00000579990 94 ntBASIC5.72□□□□□ -1.49
NKX2-3Q8TAU0 MIR92B-201ENST00000607575 96 ntBASIC5.72□□□□□ -1.49
NKX2-3Q8TAU0 AC006001.4-201ENST00000622243 395 ntBASIC5.72□□□□□ -1.49
NKX2-3Q8TAU0 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.72□□□□□ -1.49
NKX2-3Q8TAU0 Clostridiales-1.2-201ENST00000636724 160 ntBASIC5.72□□□□□ -1.49
NKX2-3Q8TAU0 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
NKX2-3Q8TAU0 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NKX2-3Q8TAU0 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.72□□□□□ -1.49
NKX2-3Q8TAU0 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.72□□□□□ -1.49
NKX2-3Q8TAU0 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
NKX2-3Q8TAU0 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NKX2-3Q8TAU0 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
NKX2-3Q8TAU0 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.49
NKX2-3Q8TAU0 AL672167.1-205ENST00000641112 3080 ntBASIC5.71□□□□□ -1.49
NKX2-3Q8TAU0 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
NKX2-3Q8TAU0 STX3-208ENST00000641815 3236 ntBASIC5.71□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms