Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC0.67□□□□□ -2.3
SPTSSBQ8NFR3 AC096586.1-201ENST00000610267 561 ntBASIC0.67□□□□□ -2.3
SPTSSBQ8NFR3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.67□□□□□ -2.3
SPTSSBQ8NFR3 AC079416.3-201ENST00000624479 549 ntBASIC0.67□□□□□ -2.3
SPTSSBQ8NFR3 AL159972.1-201ENST00000625150 448 ntBASIC0.67□□□□□ -2.3
SPTSSBQ8NFR3 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC0.67□□□□□ -2.3
SPTSSBQ8NFR3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 RNU1-58P-201ENST00000362413 163 ntBASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 RNU5E-1-201ENST00000362477 120 ntBASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 RNU2-2P-201ENST00000410396 191 ntBASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 UBE2V1P11-201ENST00000411559 285 ntBASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 AL451054.2-201ENST00000420896 202 ntBASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 AL358453.1-201ENST00000422522 250 ntBASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 AC091390.1-201ENST00000433904 331 ntBASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 AL160314.1-201ENST00000490836 438 ntBASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 SNORA25.11-201ENST00000515935 105 ntBASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 RNA5SP404-201ENST00000517118 132 ntBASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 AC012213.3-201ENST00000577199 777 ntBASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 MIR4700-201ENST00000578311 74 ntBASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 MIR4255-201ENST00000579351 72 ntBASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 AC069304.2-201ENST00000605154 435 ntBASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 AC004805.2-201ENST00000605382 482 ntBASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 U2.15-201ENST00000611544 191 ntBASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 U2.16-201ENST00000613119 191 ntBASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 U2.12-201ENST00000613778 191 ntBASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 U2.20-201ENST00000613956 192 ntBASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 U2.9-201ENST00000615427 191 ntBASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 AC107905.1-201ENST00000616204 426 ntBASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 U2.11-201ENST00000616345 191 ntBASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 U2.2-201ENST00000616535 191 ntBASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 U2.3-201ENST00000617785 191 ntBASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 U2.19-201ENST00000618602 191 ntBASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 RNU2-1-201ENST00000618664 191 ntBASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 U2.6-201ENST00000619225 191 ntBASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 U2.5-201ENST00000619465 191 ntBASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 U2.10-201ENST00000620268 191 ntBASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 AC138627.2-201ENST00000624202 601 ntBASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 TEX21P-201ENST00000447107 1476 ntBASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 AL136360.1-201ENST00000503377 1900 ntBASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
SPTSSBQ8NFR3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 SNORD115-3-201ENST00000363100 82 ntBASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 RNU6-40P-201ENST00000384254 107 ntBASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 SNORD14D-201ENST00000384390 87 ntBASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 MIR134-201ENST00000385258 73 ntBASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 SNORA40.18-201ENST00000391200 128 ntBASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 TRIM60P5Y-201ENST00000413946 574 ntBASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 OR51A5P-201ENST00000415429 942 ntBASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 BTF3P4-201ENST00000418852 495 ntBASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 AL591704.2-201ENST00000421658 181 ntBASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 AC019178.2-201ENST00000423595 505 ntBASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 AC139712.2-201ENST00000424302 339 ntBASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 ELOCP14-201ENST00000428070 331 ntBASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 ELOCP7-201ENST00000439968 331 ntBASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 AC003989.2-201ENST00000440224 169 ntBASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 CR769776.1-201ENST00000441254 787 ntBASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 RPS4XP11-201ENST00000446897 772 ntBASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 AC245102.2-201ENST00000448956 180 ntBASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 SNORA84-201ENST00000459229 133 ntBASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 AC092902.1-201ENST00000486999 259 ntBASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 AC117532.1-201ENST00000514638 323 ntBASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 RNU6-250P-201ENST00000516958 103 ntBASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 AP000916.1-201ENST00000533869 835 ntBASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 RBM7-208ENST00000545678 867 ntTSL 3 BASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 PSMA3P-201ENST00000555485 635 ntBASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 NIFKP6-201ENST00000598115 845 ntBASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 AC097468.3-201ENST00000607956 456 ntBASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 AL118556.2-201ENST00000614375 824 ntBASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 AC004009.2-201ENST00000623016 728 ntBASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 AP003485.1-201ENST00000625093 753 ntBASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 AC243829.7-201ENST00000633081 225 ntBASIC0.65□□□□□ -2.31
SPTSSBQ8NFR3 RNA5SP327-201ENST00000362494 101 ntBASIC0.64□□□□□ -2.31
SPTSSBQ8NFR3 RNU1-22P-201ENST00000363334 158 ntBASIC0.64□□□□□ -2.31
SPTSSBQ8NFR3 MIR506-201ENST00000384998 124 ntBASIC0.64□□□□□ -2.31
SPTSSBQ8NFR3 RPL22P22-201ENST00000395439 379 ntBASIC0.64□□□□□ -2.31
SPTSSBQ8NFR3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC0.64□□□□□ -2.31
SPTSSBQ8NFR3 RN7SKP192-201ENST00000411291 327 ntBASIC0.64□□□□□ -2.31
SPTSSBQ8NFR3 MTCYBP38-201ENST00000417160 1123 ntBASIC0.64□□□□□ -2.31
SPTSSBQ8NFR3 CST2P1-201ENST00000425770 87 ntBASIC0.64□□□□□ -2.31
SPTSSBQ8NFR3 MTND2P5-201ENST00000432656 1006 ntBASIC0.64□□□□□ -2.31
SPTSSBQ8NFR3 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC0.64□□□□□ -2.31
SPTSSBQ8NFR3 AC027119.1-201ENST00000440877 241 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms