Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 HSPE1P12-201ENST00000412576 301 ntBASIC3.8□□□□□ -1.8
SIMC1Q8NDZ2 YPEL5P1-201ENST00000419731 367 ntBASIC3.8□□□□□ -1.8
SIMC1Q8NDZ2 RPL23AP83-201ENST00000434984 473 ntBASIC3.8□□□□□ -1.8
SIMC1Q8NDZ2 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.8□□□□□ -1.8
SIMC1Q8NDZ2 AC004801.2-202ENST00000463559 283 ntBASIC3.8□□□□□ -1.8
SIMC1Q8NDZ2 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.8□□□□□ -1.8
SIMC1Q8NDZ2 RPS27P27-201ENST00000498779 255 ntBASIC3.8□□□□□ -1.8
SIMC1Q8NDZ2 RNU6-390P-201ENST00000516259 103 ntBASIC3.8□□□□□ -1.8
SIMC1Q8NDZ2 SCARNA15.2-201ENST00000516409 127 ntBASIC3.8□□□□□ -1.8
SIMC1Q8NDZ2 RNU1-45P-201ENST00000517191 141 ntBASIC3.8□□□□□ -1.8
SIMC1Q8NDZ2 RN7SKP295-201ENST00000517264 153 ntBASIC3.8□□□□□ -1.8
SIMC1Q8NDZ2 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.8□□□□□ -1.8
SIMC1Q8NDZ2 AP003122.3-201ENST00000526316 255 ntBASIC3.8□□□□□ -1.8
SIMC1Q8NDZ2 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.8□□□□□ -1.8
SIMC1Q8NDZ2 MIR3149-201ENST00000584629 83 ntBASIC3.8□□□□□ -1.8
SIMC1Q8NDZ2 MIR5684-201ENST00000585074 65 ntBASIC3.8□□□□□ -1.8
SIMC1Q8NDZ2 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.8□□□□□ -1.8
SIMC1Q8NDZ2 7SK.7-201ENST00000603504 247 ntBASIC3.8□□□□□ -1.8
SIMC1Q8NDZ2 AC090425.1-201ENST00000610007 140 ntBASIC3.8□□□□□ -1.8
SIMC1Q8NDZ2 MTND5P19-201ENST00000424872 1794 ntBASIC3.8□□□□□ -1.8
SIMC1Q8NDZ2 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
SIMC1Q8NDZ2 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.8□□□□□ -1.8
SIMC1Q8NDZ2 Z82217.1-201ENST00000625157 8149 ntBASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 NCAPGP1-201ENST00000505112 1814 ntBASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 SNORD35B-201ENST00000363660 87 ntBASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 RNU6-82P-201ENST00000363970 107 ntBASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 RNU6-61P-201ENST00000365528 109 ntBASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 Y_RNA.576-201ENST00000384781 102 ntBASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 MIR514A1-201ENST00000385133 98 ntBASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 MIR493-201ENST00000385254 89 ntBASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 AL139397.2-201ENST00000404529 772 ntBASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 RNA5SP107-201ENST00000411358 122 ntBASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 POLHP1-201ENST00000411806 470 ntBASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 RPS12P24-201ENST00000412619 387 ntBASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 AL356095.1-201ENST00000417217 199 ntBASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 AL139396.1-201ENST00000421137 167 ntBASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 NDUFB4P7-201ENST00000423198 363 ntBASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 RPL7P2-201ENST00000427639 268 ntBASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 AC005094.1-201ENST00000440420 368 ntBASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 RN7SL542P-201ENST00000467147 294 ntBASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 AL132838.2-201ENST00000492041 314 ntBASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 RNU6-64P-201ENST00000517119 105 ntBASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 IGKV2-38-201ENST00000517443 247 ntBASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 MIR4680-201ENST00000580906 66 ntBASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 AC024220.1-201ENST00000603675 484 ntBASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 AC092747.3-201ENST00000603769 301 ntBASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 DUSP12P1-201ENST00000612874 516 ntBASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 AC002076.2-201ENST00000617362 122 ntBASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 AL357559.1-201ENST00000622228 274 ntBASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SIMC1Q8NDZ2 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 ZNF807-201ENST00000328088 1707 ntBASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 MAPK10-373ENST00000641983 6772 ntBASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 Y_RNA.212-201ENST00000364177 102 ntBASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 AC117470.1-201ENST00000381974 330 ntBASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 Y_RNA.452-201ENST00000384202 108 ntBASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 Y_RNA.482-201ENST00000384377 111 ntBASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 RNU6-954P-201ENST00000411355 107 ntBASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 RPL30P2-201ENST00000414021 291 ntBASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 RPL7P46-201ENST00000425129 740 ntBASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 MTCYBP9-201ENST00000431021 303 ntBASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 RPL36AP6-201ENST00000435770 321 ntBASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 AL136097.1-201ENST00000456945 913 ntBASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 RNU7-170P-201ENST00000459303 61 ntBASIC3.78□□□□□ -1.8
SIMC1Q8NDZ2 RN7SL93P-201ENST00000463035 293 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms