Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 SNORA5A-201ENST00000384111 134 ntBASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 MIR34A-201ENST00000385130 110 ntBASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 UBE2V1P2-201ENST00000397758 440 ntBASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 U3.37-201ENST00000408528 213 ntBASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 AC114491.1-201ENST00000416095 246 ntBASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 AC003685.2-201ENST00000422795 395 ntBASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 RPL30P4-201ENST00000429309 333 ntBASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 CETN4P-201ENST00000432407 469 ntBASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 RPS20P5-201ENST00000434808 360 ntBASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 AL353706.1-201ENST00000436728 494 ntBASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 RPS15AP9-201ENST00000439856 381 ntBASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 GAPDHP17-201ENST00000449858 1001 ntBASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 RNU7-26P-201ENST00000458980 63 ntBASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 AC025518.1-201ENST00000479856 347 ntBASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 AC022493.1-201ENST00000492984 337 ntBASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 FAM92A1P2-202ENST00000504766 877 ntBASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 RNU6-123P-201ENST00000516163 102 ntBASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 MIR892C-201ENST00000516410 77 ntBASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 AP004607.1-201ENST00000524456 203 ntBASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 AP002453.2-201ENST00000533503 320 ntBASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 AC079598.5-201ENST00000547460 117 ntBASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 MIR4446-201ENST00000578505 67 ntBASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 AC008088.1-201ENST00000580993 280 ntBASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 AL161756.2-201ENST00000604597 246 ntBASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 AC121247.2-201ENST00000604776 136 ntBASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 AC126118.1-201ENST00000607744 628 ntBASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 AC096772.1-201ENST00000609146 564 ntBASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 uc_338.11-201ENST00000619132 160 ntBASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 AC025034.2-201ENST00000623264 286 ntBASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 SCARNA4-202ENST00000625402 129 ntBASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
LINC01561Q8N1V8 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 SNORA38-201ENST00000363946 132 ntBASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 RNU6-487P-201ENST00000365430 104 ntBASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 SNORA75B-201ENST00000384053 137 ntBASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 SNORD116-8-201ENST00000384365 95 ntBASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 UBA52P6-201ENST00000399822 382 ntBASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 RNU6ATAC-201ENST00000408749 126 ntBASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 RNU6-248P-201ENST00000410720 107 ntBASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 RN7SKP263-201ENST00000411194 309 ntBASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 CYCSP19-201ENST00000411715 316 ntBASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 Z82209.1-201ENST00000422141 2135 ntBASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 SUMO1P4-201ENST00000429430 302 ntBASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 Z98742.2-201ENST00000431564 187 ntBASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 AC005019.1-201ENST00000436455 431 ntBASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 AL583843.1-201ENST00000456070 346 ntBASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 RPL23AP11-201ENST00000475260 469 ntBASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 RN7SL633P-201ENST00000488974 297 ntBASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 AC090096.1-201ENST00000489168 390 ntBASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 HMGB1P30-201ENST00000492455 606 ntBASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 AC112206.3-201ENST00000514578 389 ntBASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 AC092325.1-201ENST00000566449 554 ntBASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 AC008521.1-201ENST00000587471 187 ntBASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 AL590229.1-201ENST00000603497 542 ntBASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 AL158032.1-201ENST00000605401 106 ntBASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 AC107871.2-201ENST00000612894 502 ntBASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 HMGB1P24-202ENST00000615653 685 ntBASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 AC008147.4-201ENST00000617570 1204 ntBASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 AC138932.5-201ENST00000617759 563 ntBASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 MIR3529-201ENST00000637713 78 ntBASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.1□□□□□ -2.07
LINC01561Q8N1V8 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
LINC01561Q8N1V8 HSPA8P4-201ENST00000511877 1920 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms