Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 RNA5SP132-201ENST00000364725 118 ntBASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 RN7SKP153-201ENST00000365026 316 ntBASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 MIR487A-201ENST00000385009 80 ntBASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 CYP4F29P-201ENST00000420685 446 ntBASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 AC020890.1-201ENST00000491837 504 ntBASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 SNORA25.12-201ENST00000516202 82 ntBASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 RNU6-966P-201ENST00000516479 104 ntBASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 SNORA43.2-201ENST00000516652 128 ntBASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 RNU6-1234P-201ENST00000516877 103 ntBASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 RNU6-58P-201ENST00000517143 103 ntBASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 AC126177.5-201ENST00000549599 178 ntBASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 AC051619.2-201ENST00000559063 397 ntBASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 AL357075.2-201ENST00000614906 189 ntBASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 MIR6886-201ENST00000619864 61 ntBASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 AC048347.1-201ENST00000624621 427 ntBASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 AL049767.1-202ENST00000637826 242 ntBASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 MUC2-202ENST00000613187 4845 ntBASIC4.97□□□□□ -1.61
CCDC116Q8IYX3 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
CCDC116Q8IYX3 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
CCDC116Q8IYX3 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CCDC116Q8IYX3 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
CCDC116Q8IYX3 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC116Q8IYX3 RNU5B-2P-201ENST00000363036 113 ntBASIC4.96□□□□□ -1.62
CCDC116Q8IYX3 SNORA72.2-201ENST00000365028 127 ntBASIC4.96□□□□□ -1.62
CCDC116Q8IYX3 RNU6-356P-201ENST00000384140 107 ntBASIC4.96□□□□□ -1.62
CCDC116Q8IYX3 MTHFD2P2-201ENST00000407725 247 ntBASIC4.96□□□□□ -1.62
CCDC116Q8IYX3 OR3A2-201ENST00000408891 1076 ntBASIC4.96□□□□□ -1.62
CCDC116Q8IYX3 RPL30P13-201ENST00000418873 348 ntBASIC4.96□□□□□ -1.62
CCDC116Q8IYX3 RAB28P5-201ENST00000427490 651 ntBASIC4.96□□□□□ -1.62
CCDC116Q8IYX3 AC243964.1-201ENST00000441814 261 ntBASIC4.96□□□□□ -1.62
CCDC116Q8IYX3 RPL7AP61-201ENST00000443410 636 ntBASIC4.96□□□□□ -1.62
CCDC116Q8IYX3 MLLT10P2-201ENST00000506434 249 ntBASIC4.96□□□□□ -1.62
CCDC116Q8IYX3 AC020593.1-201ENST00000507399 299 ntBASIC4.96□□□□□ -1.62
CCDC116Q8IYX3 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC116Q8IYX3 AC098976.1-201ENST00000513014 541 ntBASIC4.96□□□□□ -1.62
CCDC116Q8IYX3 AL161713.1-201ENST00000555538 145 ntBASIC4.96□□□□□ -1.62
CCDC116Q8IYX3 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CCDC116Q8IYX3 AL590392.1-201ENST00000604960 446 ntBASIC4.96□□□□□ -1.62
CCDC116Q8IYX3 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC116Q8IYX3 AL023881.1-201ENST00000621088 301 ntBASIC4.96□□□□□ -1.62
CCDC116Q8IYX3 AC092628.2-201ENST00000622492 339 ntBASIC4.96□□□□□ -1.62
CCDC116Q8IYX3 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CCDC116Q8IYX3 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CCDC116Q8IYX3 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.96□□□□□ -1.62
CCDC116Q8IYX3 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
CCDC116Q8IYX3 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC116Q8IYX3 AL359693.1-201ENST00000614959 2407 ntBASIC4.96□□□□□ -1.62
CCDC116Q8IYX3 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC116Q8IYX3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.96□□□□□ -1.62
CCDC116Q8IYX3 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC116Q8IYX3 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CCDC116Q8IYX3 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC116Q8IYX3 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 AL365440.1-201ENST00000436135 2167 ntBASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 RNU6-275P-201ENST00000364910 107 ntBASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 RNU4-11P-201ENST00000365287 132 ntBASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 MIR143-201ENST00000385300 106 ntBASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 RNA5SP339-201ENST00000390987 122 ntBASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 RNU2-68P-201ENST00000410878 191 ntBASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 CHEK2P5-201ENST00000423877 246 ntBASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 RNU6-1211P-201ENST00000459179 105 ntBASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 RN7SL346P-201ENST00000491561 294 ntBASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 Y_RNA.686-201ENST00000516548 134 ntBASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 RNU7-121P-201ENST00000516604 62 ntBASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 AP002001.1-203ENST00000534002 267 ntBASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 AC107016.1-201ENST00000550463 337 ntBASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 AC024153.1-201ENST00000603103 365 ntBASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 AL138963.2-201ENST00000605137 226 ntBASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 MIR6768-201ENST00000610734 72 ntBASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 AC004825.2-201ENST00000616634 455 ntBASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 MIR6839-201ENST00000620425 113 ntBASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CCDC116Q8IYX3 AC110491.1-201ENST00000562191 2010 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms