Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.7□□□□□ -1.66
RNF43Q68DV7 RPS15AP6-201ENST00000420703 385 ntBASIC4.7□□□□□ -1.66
RNF43Q68DV7 AC069285.2-201ENST00000440210 275 ntBASIC4.7□□□□□ -1.66
RNF43Q68DV7 NUTF2P3-201ENST00000448540 384 ntBASIC4.7□□□□□ -1.66
RNF43Q68DV7 FTH1P24-201ENST00000503502 462 ntBASIC4.7□□□□□ -1.66
RNF43Q68DV7 AC020593.1-201ENST00000507399 299 ntBASIC4.7□□□□□ -1.66
RNF43Q68DV7 MTND3P25-201ENST00000509243 135 ntBASIC4.7□□□□□ -1.66
RNF43Q68DV7 RNA5SP154-201ENST00000516193 111 ntBASIC4.7□□□□□ -1.66
RNF43Q68DV7 RNU6-352P-201ENST00000516908 107 ntBASIC4.7□□□□□ -1.66
RNF43Q68DV7 AC008694.2-201ENST00000517591 306 ntBASIC4.7□□□□□ -1.66
RNF43Q68DV7 MRPS36P4-201ENST00000534436 298 ntBASIC4.7□□□□□ -1.66
RNF43Q68DV7 AC093023.1-201ENST00000547375 507 ntBASIC4.7□□□□□ -1.66
RNF43Q68DV7 TRAV32-201ENST00000553993 340 ntBASIC4.7□□□□□ -1.66
RNF43Q68DV7 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.7□□□□□ -1.66
RNF43Q68DV7 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF43Q68DV7 SNORD39.4-201ENST00000620099 78 ntBASIC4.7□□□□□ -1.66
RNF43Q68DV7 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RNF43Q68DV7 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
RNF43Q68DV7 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.7□□□□□ -1.66
RNF43Q68DV7 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF43Q68DV7 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF43Q68DV7 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF43Q68DV7 ZNF299P-201ENST00000406845 1804 ntBASIC4.69□□□□□ -1.66
RNF43Q68DV7 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF43Q68DV7 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF43Q68DV7 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RNF43Q68DV7 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RNF43Q68DV7 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.69□□□□□ -1.66
RNF43Q68DV7 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RNF43Q68DV7 LINC02555-201ENST00000563933 1951 ntBASIC4.69□□□□□ -1.66
RNF43Q68DV7 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF43Q68DV7 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RNF43Q68DV7 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
RNF43Q68DV7 CPHL1P-201ENST00000461341 3407 ntBASIC4.69□□□□□ -1.66
RNF43Q68DV7 RNU6-288P-201ENST00000363690 104 ntBASIC4.69□□□□□ -1.66
RNF43Q68DV7 U8.8-201ENST00000365399 135 ntBASIC4.69□□□□□ -1.66
RNF43Q68DV7 RNU6-14P-201ENST00000384630 106 ntBASIC4.69□□□□□ -1.66
RNF43Q68DV7 MIR93-201ENST00000385024 80 ntBASIC4.69□□□□□ -1.66
RNF43Q68DV7 RPS26P8-201ENST00000393490 348 ntBASIC4.69□□□□□ -1.66
RNF43Q68DV7 RN7SKP51-201ENST00000410781 304 ntBASIC4.69□□□□□ -1.66
RNF43Q68DV7 RPS12P10-201ENST00000427031 377 ntBASIC4.69□□□□□ -1.66
RNF43Q68DV7 AC091286.1-201ENST00000431233 461 ntBASIC4.69□□□□□ -1.66
RNF43Q68DV7 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.69□□□□□ -1.66
RNF43Q68DV7 RN7SL303P-201ENST00000469773 251 ntBASIC4.69□□□□□ -1.66
RNF43Q68DV7 MTND5P41-201ENST00000517498 206 ntBASIC4.69□□□□□ -1.66
RNF43Q68DV7 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RNF43Q68DV7 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.69□□□□□ -1.66
RNF43Q68DV7 AC008962.1-201ENST00000605729 304 ntBASIC4.69□□□□□ -1.66
RNF43Q68DV7 U2.14-201ENST00000615943 113 ntBASIC4.69□□□□□ -1.66
RNF43Q68DV7 AL365265.1-201ENST00000621045 234 ntBASIC4.69□□□□□ -1.66
RNF43Q68DV7 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RNF43Q68DV7 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
RNF43Q68DV7 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF43Q68DV7 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF43Q68DV7 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF43Q68DV7 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF43Q68DV7 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RNF43Q68DV7 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF43Q68DV7 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
RNF43Q68DV7 Y_RNA.143-201ENST00000363520 106 ntBASIC4.68□□□□□ -1.66
RNF43Q68DV7 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.68□□□□□ -1.66
RNF43Q68DV7 RNU6-47P-201ENST00000383866 107 ntBASIC4.68□□□□□ -1.66
RNF43Q68DV7 RNU6-1117P-201ENST00000384525 104 ntBASIC4.68□□□□□ -1.66
RNF43Q68DV7 RN7SKP167-201ENST00000411047 285 ntBASIC4.68□□□□□ -1.66
RNF43Q68DV7 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.68□□□□□ -1.66
RNF43Q68DV7 MTND3P9-201ENST00000429526 346 ntBASIC4.68□□□□□ -1.66
RNF43Q68DV7 AC004866.2-201ENST00000438285 481 ntBASIC4.68□□□□□ -1.66
RNF43Q68DV7 AC234775.1-201ENST00000454247 670 ntBASIC4.68□□□□□ -1.66
RNF43Q68DV7 AC091021.1-201ENST00000468051 388 ntBASIC4.68□□□□□ -1.66
RNF43Q68DV7 AC025445.1-201ENST00000502728 300 ntBASIC4.68□□□□□ -1.66
RNF43Q68DV7 IGLVIV-65-201ENST00000517313 360 ntBASIC4.68□□□□□ -1.66
RNF43Q68DV7 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.68□□□□□ -1.66
RNF43Q68DV7 AC087369.1-201ENST00000520775 996 ntBASIC4.68□□□□□ -1.66
RNF43Q68DV7 MRPL49P2-201ENST00000521066 465 ntBASIC4.68□□□□□ -1.66
RNF43Q68DV7 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.68□□□□□ -1.66
RNF43Q68DV7 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RNF43Q68DV7 CR383656.7-201ENST00000548164 174 ntBASIC4.68□□□□□ -1.66
RNF43Q68DV7 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.68□□□□□ -1.66
RNF43Q68DV7 MIR5692A1-201ENST00000580523 69 ntBASIC4.68□□□□□ -1.66
RNF43Q68DV7 IPO5P1-202ENST00000600039 287 ntBASIC4.68□□□□□ -1.66
RNF43Q68DV7 AC114781.5-201ENST00000615297 108 ntBASIC4.68□□□□□ -1.66
RNF43Q68DV7 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RNF43Q68DV7 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
RNF43Q68DV7 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.68□□□□□ -1.66
RNF43Q68DV7 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.68□□□□□ -1.66
RNF43Q68DV7 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC4.68□□□□□ -1.66
RNF43Q68DV7 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
RNF43Q68DV7 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF43Q68DV7 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
RNF43Q68DV7 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
RNF43Q68DV7 RNU6-595P-201ENST00000363944 107 ntBASIC4.67□□□□□ -1.66
RNF43Q68DV7 RN7SKP224-201ENST00000364140 325 ntBASIC4.67□□□□□ -1.66
RNF43Q68DV7 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF43Q68DV7 RNU6-735P-201ENST00000410612 107 ntBASIC4.67□□□□□ -1.66
RNF43Q68DV7 RNU2-51P-201ENST00000410708 197 ntBASIC4.67□□□□□ -1.66
RNF43Q68DV7 Y_RNA.626-201ENST00000411288 95 ntBASIC4.67□□□□□ -1.66
RNF43Q68DV7 AL356387.2-201ENST00000422272 243 ntBASIC4.67□□□□□ -1.66
RNF43Q68DV7 RPL7AP25-201ENST00000423357 805 ntBASIC4.67□□□□□ -1.66
RNF43Q68DV7 RPL30P3-201ENST00000424262 333 ntBASIC4.67□□□□□ -1.66
RNF43Q68DV7 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms