Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RNU6-1183P-201ENST00000517054 60 ntBASIC3.59□□□□□ -1.83
RNF220Q5VTB9 RNU6-1314P-201ENST00000517139 104 ntBASIC3.59□□□□□ -1.83
RNF220Q5VTB9 RNA5SP179-201ENST00000517284 121 ntBASIC3.59□□□□□ -1.83
RNF220Q5VTB9 CYCSP27-201ENST00000527643 293 ntBASIC3.59□□□□□ -1.83
RNF220Q5VTB9 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.59□□□□□ -1.83
RNF220Q5VTB9 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.59□□□□□ -1.83
RNF220Q5VTB9 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.59□□□□□ -1.83
RNF220Q5VTB9 AL121579.1-201ENST00000555129 305 ntBASIC3.59□□□□□ -1.83
RNF220Q5VTB9 AC025884.1-201ENST00000556034 378 ntBASIC3.59□□□□□ -1.83
RNF220Q5VTB9 AC091167.4-201ENST00000605079 184 ntBASIC3.59□□□□□ -1.83
RNF220Q5VTB9 AC093913.1-201ENST00000614178 329 ntBASIC3.59□□□□□ -1.83
RNF220Q5VTB9 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.59□□□□□ -1.83
RNF220Q5VTB9 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.59□□□□□ -1.83
RNF220Q5VTB9 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
RNF220Q5VTB9 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.59□□□□□ -1.84
RNF220Q5VTB9 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
RNF220Q5VTB9 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RNF220Q5VTB9 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
RNF220Q5VTB9 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.58□□□□□ -1.84
RNF220Q5VTB9 AC010680.1-201ENST00000590024 3590 ntBASIC3.58□□□□□ -1.84
RNF220Q5VTB9 RNU6-1303P-201ENST00000364841 107 ntBASIC3.58□□□□□ -1.84
RNF220Q5VTB9 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.58□□□□□ -1.84
RNF220Q5VTB9 CYCSP33-201ENST00000414485 327 ntBASIC3.58□□□□□ -1.84
RNF220Q5VTB9 AC017079.2-201ENST00000416102 485 ntBASIC3.58□□□□□ -1.84
RNF220Q5VTB9 USP9YP20-201ENST00000419224 558 ntBASIC3.58□□□□□ -1.84
RNF220Q5VTB9 AL645937.1-202ENST00000421799 937 ntBASIC3.58□□□□□ -1.84
RNF220Q5VTB9 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.58□□□□□ -1.84
RNF220Q5VTB9 TBCAP1-201ENST00000436520 327 ntBASIC3.58□□□□□ -1.84
RNF220Q5VTB9 CYCSP32-201ENST00000440548 321 ntBASIC3.58□□□□□ -1.84
RNF220Q5VTB9 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.58□□□□□ -1.84
RNF220Q5VTB9 AL031183.1-201ENST00000457667 207 ntBASIC3.58□□□□□ -1.84
RNF220Q5VTB9 RNU7-23P-201ENST00000459465 62 ntBASIC3.58□□□□□ -1.84
RNF220Q5VTB9 RPS27P29-201ENST00000463110 252 ntBASIC3.58□□□□□ -1.84
RNF220Q5VTB9 RPS29P20-201ENST00000489592 171 ntBASIC3.58□□□□□ -1.84
RNF220Q5VTB9 RPS27AP10-201ENST00000496103 208 ntBASIC3.58□□□□□ -1.84
RNF220Q5VTB9 MTCO2P30-201ENST00000503662 364 ntBASIC3.58□□□□□ -1.84
RNF220Q5VTB9 FAM206BP-201ENST00000510179 541 ntBASIC3.58□□□□□ -1.84
RNF220Q5VTB9 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.58□□□□□ -1.84
RNF220Q5VTB9 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.58□□□□□ -1.84
RNF220Q5VTB9 SNORA31.9-201ENST00000516429 84 ntBASIC3.58□□□□□ -1.84
RNF220Q5VTB9 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.58□□□□□ -1.84
RNF220Q5VTB9 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.58□□□□□ -1.84
RNF220Q5VTB9 LINC00933-203ENST00000559812 219 ntBASIC3.58□□□□□ -1.84
RNF220Q5VTB9 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.58□□□□□ -1.84
RNF220Q5VTB9 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.58□□□□□ -1.84
RNF220Q5VTB9 BNIP3P25-201ENST00000596023 559 ntBASIC3.58□□□□□ -1.84
RNF220Q5VTB9 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.58□□□□□ -1.84
RNF220Q5VTB9 AL161629.2-201ENST00000615347 275 ntBASIC3.58□□□□□ -1.84
RNF220Q5VTB9 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.58□□□□□ -1.84
RNF220Q5VTB9 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RNF220Q5VTB9 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
RNF220Q5VTB9 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
RNF220Q5VTB9 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.57□□□□□ -1.84
RNF220Q5VTB9 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RNF220Q5VTB9 SNORA72.1-201ENST00000363485 129 ntBASIC3.57□□□□□ -1.84
RNF220Q5VTB9 SNORD14B-201ENST00000364533 90 ntBASIC3.57□□□□□ -1.84
RNF220Q5VTB9 RNU6-384P-201ENST00000364900 104 ntBASIC3.57□□□□□ -1.84
RNF220Q5VTB9 Y_RNA.303-201ENST00000364998 94 ntBASIC3.57□□□□□ -1.84
RNF220Q5VTB9 SNORA70C-201ENST00000384538 135 ntBASIC3.57□□□□□ -1.84
RNF220Q5VTB9 MIR34A-201ENST00000385130 110 ntBASIC3.57□□□□□ -1.84
RNF220Q5VTB9 RNA5SP293-201ENST00000410527 113 ntBASIC3.57□□□□□ -1.84
RNF220Q5VTB9 RNU4-6P-201ENST00000410804 122 ntBASIC3.57□□□□□ -1.84
RNF220Q5VTB9 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.57□□□□□ -1.84
RNF220Q5VTB9 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.57□□□□□ -1.84
RNF220Q5VTB9 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.57□□□□□ -1.84
RNF220Q5VTB9 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.57□□□□□ -1.84
RNF220Q5VTB9 AP002884.2-201ENST00000471647 395 ntBASIC3.57□□□□□ -1.84
RNF220Q5VTB9 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.57□□□□□ -1.84
RNF220Q5VTB9 AC114786.4-201ENST00000508771 728 ntBASIC3.57□□□□□ -1.84
RNF220Q5VTB9 TBCAP3-201ENST00000512475 312 ntBASIC3.57□□□□□ -1.84
RNF220Q5VTB9 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RNF220Q5VTB9 RN7SKP122-201ENST00000515923 296 ntBASIC3.57□□□□□ -1.84
RNF220Q5VTB9 SNORD59.2-201ENST00000516873 68 ntBASIC3.57□□□□□ -1.84
RNF220Q5VTB9 AC069113.1-201ENST00000517763 267 ntBASIC3.57□□□□□ -1.84
RNF220Q5VTB9 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RNF220Q5VTB9 AP000763.2-201ENST00000540641 163 ntBASIC3.57□□□□□ -1.84
RNF220Q5VTB9 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.57□□□□□ -1.84
RNF220Q5VTB9 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.57□□□□□ -1.84
RNF220Q5VTB9 CYCSP39-201ENST00000565821 309 ntBASIC3.57□□□□□ -1.84
RNF220Q5VTB9 AC002044.1-201ENST00000606707 158 ntBASIC3.57□□□□□ -1.84
RNF220Q5VTB9 MIR6867-201ENST00000610636 67 ntBASIC3.57□□□□□ -1.84
RNF220Q5VTB9 AC004852.3-201ENST00000614131 326 ntBASIC3.57□□□□□ -1.84
RNF220Q5VTB9 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.57□□□□□ -1.84
RNF220Q5VTB9 AL136221.1-201ENST00000621449 509 ntBASIC3.57□□□□□ -1.84
RNF220Q5VTB9 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.56□□□□□ -1.84
RNF220Q5VTB9 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RNF220Q5VTB9 RLIMP1-201ENST00000339626 1680 ntBASIC3.56□□□□□ -1.84
RNF220Q5VTB9 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.56□□□□□ -1.84
RNF220Q5VTB9 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RNF220Q5VTB9 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RNF220Q5VTB9 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RNF220Q5VTB9 RNA5SP443-201ENST00000363083 132 ntBASIC3.56□□□□□ -1.84
RNF220Q5VTB9 RNU6-266P-201ENST00000364225 107 ntBASIC3.56□□□□□ -1.84
RNF220Q5VTB9 Y_RNA.279-201ENST00000364763 95 ntBASIC3.56□□□□□ -1.84
RNF220Q5VTB9 SNORA14A-201ENST00000364773 135 ntBASIC3.56□□□□□ -1.84
RNF220Q5VTB9 Y_RNA.324-201ENST00000365165 102 ntBASIC3.56□□□□□ -1.84
RNF220Q5VTB9 SNORA56-201ENST00000383966 129 ntBASIC3.56□□□□□ -1.84
RNF220Q5VTB9 SNORA32.2-201ENST00000384049 122 ntBASIC3.56□□□□□ -1.84
RNF220Q5VTB9 MIR10A-201ENST00000385043 110 ntBASIC3.56□□□□□ -1.84
RNF220Q5VTB9 RNU6-510P-201ENST00000391239 108 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms