Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
RIF1Q5UIP0 TPT1P8-201ENST00000510120 555 ntBASIC0.47□□□□□ -2.33
RIF1Q5UIP0 OR10V3P-201ENST00000525712 725 ntBASIC0.47□□□□□ -2.33
RIF1Q5UIP0 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.47□□□□□ -2.33
RIF1Q5UIP0 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC0.47□□□□□ -2.33
RIF1Q5UIP0 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.47□□□□□ -2.33
RIF1Q5UIP0 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
RIF1Q5UIP0 AL161449.1-201ENST00000414531 1199 ntBASIC0.46□□□□□ -2.34
RIF1Q5UIP0 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC0.46□□□□□ -2.34
RIF1Q5UIP0 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.46□□□□□ -2.34
RIF1Q5UIP0 RNU6-1218P-201ENST00000458990 108 ntBASIC0.46□□□□□ -2.34
RIF1Q5UIP0 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC0.46□□□□□ -2.34
RIF1Q5UIP0 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
RIF1Q5UIP0 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.46□□□□□ -2.34
RIF1Q5UIP0 RNU4-73P-201ENST00000363164 141 ntBASIC0.46□□□□□ -2.34
RIF1Q5UIP0 RNU6-1164P-201ENST00000364428 107 ntBASIC0.46□□□□□ -2.34
RIF1Q5UIP0 MIR146A-201ENST00000385201 99 ntBASIC0.46□□□□□ -2.34
RIF1Q5UIP0 MIR607-201ENST00000385241 96 ntBASIC0.46□□□□□ -2.34
RIF1Q5UIP0 MIR92A2-201ENST00000385299 75 ntBASIC0.46□□□□□ -2.34
RIF1Q5UIP0 AL035666.1-201ENST00000446195 348 ntBASIC0.46□□□□□ -2.34
RIF1Q5UIP0 SSXP4-201ENST00000451349 245 ntBASIC0.46□□□□□ -2.34
RIF1Q5UIP0 CABYRP1-201ENST00000465493 1045 ntBASIC0.46□□□□□ -2.34
RIF1Q5UIP0 AC105914.1-201ENST00000511798 226 ntBASIC0.46□□□□□ -2.34
RIF1Q5UIP0 AC108120.2-201ENST00000512973 294 ntBASIC0.46□□□□□ -2.34
RIF1Q5UIP0 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC0.46□□□□□ -2.34
RIF1Q5UIP0 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC0.46□□□□□ -2.34
RIF1Q5UIP0 AC073569.3-201ENST00000619055 682 ntBASIC0.46□□□□□ -2.34
RIF1Q5UIP0 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
RIF1Q5UIP0 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
RIF1Q5UIP0 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
RIF1Q5UIP0 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
RIF1Q5UIP0 MIR92A1-201ENST00000385233 78 ntBASIC0.45□□□□□ -2.34
RIF1Q5UIP0 MIR147B-201ENST00000390185 80 ntBASIC0.45□□□□□ -2.34
RIF1Q5UIP0 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.45□□□□□ -2.34
RIF1Q5UIP0 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.45□□□□□ -2.34
RIF1Q5UIP0 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.45□□□□□ -2.34
RIF1Q5UIP0 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.45□□□□□ -2.34
RIF1Q5UIP0 RABEPKP1-201ENST00000440529 1026 ntBASIC0.45□□□□□ -2.34
RIF1Q5UIP0 AC079448.1-201ENST00000449377 373 ntBASIC0.45□□□□□ -2.34
RIF1Q5UIP0 KLF3P2-201ENST00000465138 268 ntBASIC0.45□□□□□ -2.34
RIF1Q5UIP0 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC0.45□□□□□ -2.34
RIF1Q5UIP0 MIR378F-201ENST00000578143 78 ntBASIC0.45□□□□□ -2.34
RIF1Q5UIP0 MIR4305-201ENST00000583252 102 ntBASIC0.45□□□□□ -2.34
RIF1Q5UIP0 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
RIF1Q5UIP0 AC002545.1-201ENST00000592511 181 ntBASIC0.45□□□□□ -2.34
RIF1Q5UIP0 AC004908.2-201ENST00000609090 574 ntBASIC0.45□□□□□ -2.34
RIF1Q5UIP0 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC0.45□□□□□ -2.34
RIF1Q5UIP0 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.45□□□□□ -2.34
RIF1Q5UIP0 AL356432.1-201ENST00000405809 419 ntBASIC0.45□□□□□ -2.34
RIF1Q5UIP0 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.45□□□□□ -2.34
RIF1Q5UIP0 RNU6-733P-201ENST00000410759 104 ntBASIC0.45□□□□□ -2.34
RIF1Q5UIP0 AP1S2P1-201ENST00000457344 379 ntBASIC0.45□□□□□ -2.34
RIF1Q5UIP0 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
RIF1Q5UIP0 AP003484.1-201ENST00000530974 250 ntBASIC0.45□□□□□ -2.34
RIF1Q5UIP0 OR6C73P-201ENST00000546432 358 ntBASIC0.45□□□□□ -2.34
RIF1Q5UIP0 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC0.45□□□□□ -2.34
RIF1Q5UIP0 MIR4287-201ENST00000579398 78 ntBASIC0.45□□□□□ -2.34
RIF1Q5UIP0 AC003001.2-201ENST00000616294 831 ntBASIC0.45□□□□□ -2.34
RIF1Q5UIP0 MIR6130-201ENST00000619419 109 ntBASIC0.45□□□□□ -2.34
RIF1Q5UIP0 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
RIF1Q5UIP0 AP001350.1-201ENST00000601906 1524 ntBASIC0.44□□□□□ -2.34
RIF1Q5UIP0 Y_RNA.100-201ENST00000363141 102 ntBASIC0.44□□□□□ -2.34
RIF1Q5UIP0 SNORA4.3-201ENST00000365564 137 ntBASIC0.44□□□□□ -2.34
RIF1Q5UIP0 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
RIF1Q5UIP0 MIR604-201ENST00000384880 94 ntBASIC0.44□□□□□ -2.34
RIF1Q5UIP0 VPS26BP1-201ENST00000417155 755 ntBASIC0.44□□□□□ -2.34
RIF1Q5UIP0 TRGV6-201ENST00000417928 299 ntBASIC0.44□□□□□ -2.34
RIF1Q5UIP0 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.44□□□□□ -2.34
RIF1Q5UIP0 RNF2P1-201ENST00000442955 1010 ntBASIC0.44□□□□□ -2.34
RIF1Q5UIP0 RPS27P26-201ENST00000494583 239 ntBASIC0.44□□□□□ -2.34
RIF1Q5UIP0 AC021146.2-201ENST00000504736 556 ntBASIC0.44□□□□□ -2.34
RIF1Q5UIP0 RNU6-928P-201ENST00000516876 104 ntBASIC0.44□□□□□ -2.34
RIF1Q5UIP0 EIF4EP5-201ENST00000528228 640 ntBASIC0.44□□□□□ -2.34
RIF1Q5UIP0 AC109635.4-202ENST00000531666 412 ntBASIC0.44□□□□□ -2.34
RIF1Q5UIP0 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC0.44□□□□□ -2.34
RIF1Q5UIP0 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC0.44□□□□□ -2.34
RIF1Q5UIP0 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC0.44□□□□□ -2.34
RIF1Q5UIP0 AL627230.6-201ENST00000611129 280 ntBASIC0.44□□□□□ -2.34
RIF1Q5UIP0 AC109454.4-201ENST00000623411 649 ntBASIC0.44□□□□□ -2.34
RIF1Q5UIP0 AC132825.8-201ENST00000640783 297 ntBASIC0.44□□□□□ -2.34
RIF1Q5UIP0 MIR515-2-201ENST00000384883 83 ntBASIC0.44□□□□□ -2.34
RIF1Q5UIP0 MIR515-1-201ENST00000384884 83 ntBASIC0.44□□□□□ -2.34
RIF1Q5UIP0 AL512604.1-201ENST00000404812 257 ntBASIC0.44□□□□□ -2.34
RIF1Q5UIP0 RNU6-193P-201ENST00000410977 107 ntBASIC0.44□□□□□ -2.34
RIF1Q5UIP0 RNA5SP450-201ENST00000411206 102 ntBASIC0.44□□□□□ -2.34
RIF1Q5UIP0 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC0.44□□□□□ -2.34
RIF1Q5UIP0 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC0.44□□□□□ -2.34
RIF1Q5UIP0 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC0.44□□□□□ -2.34
RIF1Q5UIP0 RPL39P29-201ENST00000447779 157 ntBASIC0.44□□□□□ -2.34
RIF1Q5UIP0 RPL30P5-201ENST00000494923 336 ntBASIC0.44□□□□□ -2.34
RIF1Q5UIP0 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
RIF1Q5UIP0 AC103710.4-201ENST00000609301 899 ntBASIC0.44□□□□□ -2.34
RIF1Q5UIP0 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.43□□□□□ -2.34
RIF1Q5UIP0 Y_RNA.468-201ENST00000384298 102 ntBASIC0.43□□□□□ -2.34
RIF1Q5UIP0 RNU6-452P-201ENST00000384406 107 ntBASIC0.43□□□□□ -2.34
RIF1Q5UIP0 Y_RNA.514-201ENST00000384528 112 ntBASIC0.43□□□□□ -2.34
RIF1Q5UIP0 PIGPP2-201ENST00000411569 458 ntBASIC0.43□□□□□ -2.34
RIF1Q5UIP0 HSPE1P21-201ENST00000438283 308 ntBASIC0.43□□□□□ -2.34
RIF1Q5UIP0 SNRPEP7-201ENST00000438350 220 ntBASIC0.43□□□□□ -2.34
RIF1Q5UIP0 AL031183.1-201ENST00000457667 207 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms