Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 RNA5SP471-201ENST00000516971 106 ntBASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 SNORA31.22-201ENST00000517204 135 ntBASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 MIR4480-201ENST00000582492 71 ntBASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 uc_338.7-201ENST00000621834 124 ntBASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.71□□□□□ -1.65
RNFT1Q5M7Z0 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
RNFT1Q5M7Z0 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.71□□□□□ -1.65
RNFT1Q5M7Z0 AC009962.1-201ENST00000567327 3813 ntBASIC4.71□□□□□ -1.65
RNFT1Q5M7Z0 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
RNFT1Q5M7Z0 SRP72P2-201ENST00000344851 1979 ntBASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 INTS6P1-201ENST00000504674 2530 ntBASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 RNU6-1180P-201ENST00000364935 107 ntBASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 SNORA72.2-201ENST00000365028 127 ntBASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 Y_RNA.319-201ENST00000365138 92 ntBASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 RNA5SP455-201ENST00000365190 119 ntBASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 MIR10A-201ENST00000385043 110 ntBASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 SNORA40.5-201ENST00000391061 128 ntBASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 RNU6-1275P-201ENST00000391087 107 ntBASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 RN7SKP216-201ENST00000411050 312 ntBASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 AC006461.1-201ENST00000412637 326 ntBASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 SSXP9-201ENST00000417503 292 ntBASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 BX276092.6-201ENST00000430476 250 ntBASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 RPS29P10-201ENST00000439197 166 ntBASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 CYCSP32-201ENST00000440548 321 ntBASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 BX276092.8-201ENST00000455722 250 ntBASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 AC012158.1-204ENST00000483430 465 ntBASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 AF186996.7-201ENST00000492781 209 ntBASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 RN7SKP122-201ENST00000515923 296 ntBASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 RNU6-537P-201ENST00000517277 103 ntBASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 AC021269.2-201ENST00000532318 330 ntBASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 MIR3121-201ENST00000579680 77 ntBASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 MIR3934-201ENST00000579806 107 ntBASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 MIR4691-201ENST00000583764 85 ntBASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 AC108081.1-201ENST00000604358 221 ntBASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 AL591926.8-201ENST00000616876 211 ntBASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 AC092628.2-201ENST00000622492 339 ntBASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 AC091953.3-201ENST00000623220 236 ntBASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 AL034408.1-202ENST00000636088 415 ntBASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 AL022322.2-201ENST00000624072 20397 ntBASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 AC099654.2-201ENST00000433031 1980 ntBASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RNFT1Q5M7Z0 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 AC092681.1-201ENST00000297369 291 ntBASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 RNU5E-7P-201ENST00000365290 117 ntBASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 AL078599.1-201ENST00000402075 293 ntBASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 HLFP1-201ENST00000402375 499 ntBASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 Y_RNA.625-201ENST00000411256 107 ntBASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 RPL37P18-201ENST00000411602 243 ntBASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 AL513331.1-201ENST00000411908 397 ntBASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 AL049745.1-201ENST00000433953 286 ntBASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 RPL34P20-201ENST00000442771 351 ntBASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 AC108161.1-201ENST00000461060 402 ntBASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 RN7SL591P-201ENST00000496150 292 ntBASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.7□□□□□ -1.66
RNFT1Q5M7Z0 BTF3L4P4-201ENST00000506381 449 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms