| CRY2 | Q49AN0 | MTND1P28-201 | ENST00000435623 | 950 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | UPP2-IT1-201 | ENST00000439185 | 357 nt | TSL 3 BASIC | 3.07 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | COX6CP2-201 | ENST00000444980 | 225 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | TAF9P1-201 | ENST00000445421 | 515 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | DPP10-AS2-201 | ENST00000446992 | 624 nt | TSL 5 BASIC | 3.07 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | TAF9P2-201 | ENST00000454958 | 515 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | RPL26P9-201 | ENST00000457466 | 433 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | snoU109.1-201 | ENST00000459339 | 135 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | Y_RNA.638-201 | ENST00000459374 | 113 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | MTCO2P29-201 | ENST00000465212 | 189 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | RNU6-1092P-201 | ENST00000516955 | 87 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | RNA5SP165-201 | ENST00000517142 | 115 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AC060788.1-201 | ENST00000521318 | 469 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AP003122.4-201 | ENST00000530980 | 758 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AC239802.1-201 | ENST00000531288 | 406 nt | TSL 5 BASIC | 3.07 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | ST7-OT4_1.1-201 | ENST00000615322 | 200 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AC068631.1-220 | ENST00000630726 | 256 nt | TSL 5 BASIC | 3.07 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AC110079.1-202 | ENST00000635213 | 138 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | MIR3974-201 | ENST00000637126 | 96 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | MTND5P19-201 | ENST00000424872 | 1794 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AKAP9-202 | ENST00000358100 | 10309 nt | TSL 1 (best) BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | MME-216 | ENST00000615825 | 5523 nt | APPRIS P1 TSL 1 (best) BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | SNORD56.2-201 | ENST00000363242 | 71 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | RNU6-288P-201 | ENST00000363690 | 104 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | RNU5E-6P-201 | ENST00000365574 | 115 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | SNORA40.3-201 | ENST00000390964 | 122 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | RNU2-68P-201 | ENST00000410878 | 191 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | MTND5P7-201 | ENST00000413558 | 1798 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AC006041.1-201 | ENST00000425322 | 328 nt | TSL 3 BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | GYPB-201 | ENST00000429670 | 239 nt | TSL 1 (best) BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | RPS27AP8-201 | ENST00000452665 | 445 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AL033528.1-201 | ENST00000453780 | 140 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | snoU13.23-201 | ENST00000458863 | 104 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AC108752.1-201 | ENST00000484679 | 576 nt | TSL 5 BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | RPL36AP51-201 | ENST00000487216 | 318 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | OXR1-207 | ENST00000497705 | 2007 nt | TSL 2 BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AC092608.1-201 | ENST00000503505 | 267 nt | TSL 2 BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AC010486.3-201 | ENST00000511602 | 785 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | MYOT-208 | ENST00000515645 | 1578 nt | TSL 2 BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | SNORA31.3-201 | ENST00000516029 | 96 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | RNU4ATAC15P-201 | ENST00000516415 | 126 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | HTN3-202 | ENST00000526767 | 578 nt | APPRIS P2 TSL 1 (best) BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AL136146.2-201 | ENST00000534594 | 494 nt | TSL 2 BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | SNHG1-210 | ENST00000539303 | 240 nt | TSL 3 BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AL391261.3-201 | ENST00000557194 | 520 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AC137800.2-201 | ENST00000574375 | 120 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | MIR1273D-201 | ENST00000577266 | 86 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AC019183.1-201 | ENST00000580524 | 505 nt | TSL 3 BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | MIR3682-201 | ENST00000581338 | 84 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AC022335.1-204 | ENST00000590779 | 600 nt | APPRIS ALT2 TSL 2 BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | ZNFX1-AS1_2.1-201 | ENST00000610973 | 93 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AC073114.1-201 | ENST00000612027 | 490 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | WARS-244 | ENST00000627608 | 123 nt | TSL 5 BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AP003399.1-201 | ENST00000637534 | 361 nt | BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | GYPB-216 | ENST00000638448 | 363 nt | APPRIS P1 TSL 1 (best) BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | DMD-203 | ENST00000357033 | 13956 nt | APPRIS P3 TSL 1 (best) BASIC | 3.06 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | ZCCHC10-201 | ENST00000324170 | 2178 nt | APPRIS P3 TSL 1 (best) BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AC008264.2-201 | ENST00000610193 | 3731 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | U3.4-201 | ENST00000363352 | 213 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | SNORD114-30-201 | ENST00000364448 | 72 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | RNY4P34-201 | ENST00000364779 | 95 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AP003170.3-201 | ENST00000399123 | 158 nt | TSL 5 BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AL139397.2-201 | ENST00000404529 | 772 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AC127391.1-201 | ENST00000411737 | 98 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | RPS3AP3-201 | ENST00000411933 | 242 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | HMGN1P14-201 | ENST00000412459 | 517 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AC010967.2-201 | ENST00000418451 | 333 nt | TSL 2 BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AC090960.1-201 | ENST00000421072 | 306 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | HMGN2P30-201 | ENST00000423237 | 256 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | SLC44A3-AS1-205 | ENST00000424505 | 612 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AC007283.2-201 | ENST00000424739 | 197 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AL512656.1-201 | ENST00000427492 | 401 nt | TSL 2 BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AC020571.1-201 | ENST00000430904 | 768 nt | TSL 2 BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | RPL36AP53-201 | ENST00000432891 | 316 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AL135923.2-201 | ENST00000435444 | 501 nt | TSL 2 BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | HMGB3P12-201 | ENST00000438745 | 556 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | NRG3-AS1-201 | ENST00000448936 | 555 nt | TSL 2 BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | LINC01813-201 | ENST00000451034 | 712 nt | TSL 1 (best) BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | RNA5SP269-201 | ENST00000459032 | 137 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | MRPS17P3-201 | ENST00000465453 | 385 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AC103975.1-201 | ENST00000482506 | 483 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | RPS27P26-201 | ENST00000494583 | 239 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AC079340.1-201 | ENST00000504799 | 552 nt | TSL 4 BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AC114786.4-201 | ENST00000508771 | 728 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | NDUFB4P2-201 | ENST00000509515 | 391 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AC092378.2-202 | ENST00000569328 | 445 nt | TSL 3 BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | HMGN2P15-201 | ENST00000585707 | 270 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | CLIC4P2-201 | ENST00000601934 | 717 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | BNIP3P9-201 | ENST00000603714 | 553 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AC007363.1-201 | ENST00000604736 | 620 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AC008498.1-201 | ENST00000613012 | 531 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AL133173.2-201 | ENST00000614270 | 90 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AC099654.13-201 | ENST00000639774 | 207 nt | BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | HERC4-201 | ENST00000277817 | 4371 nt | TSL 1 (best) BASIC | 3.05 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | CEP57L1-201 | ENST00000359793 | 2515 nt | APPRIS P3 TSL 1 (best) BASIC | 3.04 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | PRKD3-201 | ENST00000234179 | 5900 nt | APPRIS P1 TSL 1 (best) BASIC | 3.04 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AC008669.1-201 | ENST00000565823 | 2178 nt | BASIC | 3.04 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | RAPGEF6-202 | ENST00000308008 | 4176 nt | TSL 1 (best) BASIC | 3.04 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | AGTR1-204 | ENST00000418473 | 2071 nt | TSL 5 BASIC | 3.04 | □□□□□ -1.92 | | |
| CRY2 | Q49AN0 | RGPD6-201 | ENST00000329516 | 7165 nt | APPRIS P1 TSL 1 (best) BASIC | 3.04 | □□□□□ -1.92 | | |