Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.2□□□□□ -1.9
CALD1Q05682 MTCO1P47-201ENST00000523889 1271 ntBASIC3.2□□□□□ -1.9
CALD1Q05682 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.2□□□□□ -1.9
CALD1Q05682 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.2□□□□□ -1.9
CALD1Q05682 AC135628.1-201ENST00000568867 534 ntBASIC3.2□□□□□ -1.9
CALD1Q05682 AC010546.1-201ENST00000569391 485 ntBASIC3.2□□□□□ -1.9
CALD1Q05682 MYL12BP1-201ENST00000569826 507 ntBASIC3.2□□□□□ -1.9
CALD1Q05682 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.2□□□□□ -1.9
CALD1Q05682 AC007363.1-201ENST00000604736 620 ntBASIC3.2□□□□□ -1.9
CALD1Q05682 AC092354.1-201ENST00000606057 376 ntBASIC3.2□□□□□ -1.9
CALD1Q05682 AL589994.2-201ENST00000621124 579 ntBASIC3.2□□□□□ -1.9
CALD1Q05682 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.2□□□□□ -1.9
CALD1Q05682 AC243829.7-201ENST00000633081 225 ntBASIC3.2□□□□□ -1.9
CALD1Q05682 MTND5P29-201ENST00000458676 1807 ntBASIC3.2□□□□□ -1.9
CALD1Q05682 AC007336.1-201ENST00000576365 3828 ntBASIC3.2□□□□□ -1.9
CALD1Q05682 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CALD1Q05682 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CALD1Q05682 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CALD1Q05682 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.19□□□□□ -1.9
CALD1Q05682 RNU6-14P-201ENST00000384630 106 ntBASIC3.19□□□□□ -1.9
CALD1Q05682 RNU2-49P-201ENST00000410666 184 ntBASIC3.19□□□□□ -1.9
CALD1Q05682 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.19□□□□□ -1.9
CALD1Q05682 ZNF90P2-204ENST00000419323 1075 ntBASIC3.19□□□□□ -1.9
CALD1Q05682 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.19□□□□□ -1.9
CALD1Q05682 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.19□□□□□ -1.9
CALD1Q05682 SKA2P1-201ENST00000425592 390 ntBASIC3.19□□□□□ -1.9
CALD1Q05682 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.19□□□□□ -1.9
CALD1Q05682 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.19□□□□□ -1.9
CALD1Q05682 HMGB1P27-201ENST00000431429 603 ntBASIC3.19□□□□□ -1.9
CALD1Q05682 GPM6BP2-201ENST00000432046 144 ntBASIC3.19□□□□□ -1.9
CALD1Q05682 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.19□□□□□ -1.9
CALD1Q05682 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.19□□□□□ -1.9
CALD1Q05682 UBE2D3P4-201ENST00000441973 436 ntBASIC3.19□□□□□ -1.9
CALD1Q05682 GPM6BP1-201ENST00000446387 144 ntBASIC3.19□□□□□ -1.9
CALD1Q05682 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.19□□□□□ -1.9
CALD1Q05682 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.19□□□□□ -1.9
CALD1Q05682 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.19□□□□□ -1.9
CALD1Q05682 MRPS36P2-201ENST00000512569 299 ntBASIC3.19□□□□□ -1.9
CALD1Q05682 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.19□□□□□ -1.9
CALD1Q05682 RNA5SP24-201ENST00000516478 95 ntBASIC3.19□□□□□ -1.9
CALD1Q05682 RNU1-104P-201ENST00000517280 175 ntBASIC3.19□□□□□ -1.9
CALD1Q05682 AL359212.1-201ENST00000556608 614 ntBASIC3.19□□□□□ -1.9
CALD1Q05682 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.19□□□□□ -1.9
CALD1Q05682 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.19□□□□□ -1.9
CALD1Q05682 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.19□□□□□ -1.9
CALD1Q05682 MIR3915-201ENST00000578518 97 ntBASIC3.19□□□□□ -1.9
CALD1Q05682 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CALD1Q05682 NIFKP6-201ENST00000598115 845 ntBASIC3.19□□□□□ -1.9
CALD1Q05682 AC010620.2-201ENST00000600135 313 ntBASIC3.19□□□□□ -1.9
CALD1Q05682 AL355877.2-201ENST00000603670 358 ntBASIC3.19□□□□□ -1.9
CALD1Q05682 AL031775.1-201ENST00000607014 887 ntBASIC3.19□□□□□ -1.9
CALD1Q05682 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.19□□□□□ -1.9
CALD1Q05682 AL137847.3-201ENST00000611521 109 ntBASIC3.19□□□□□ -1.9
CALD1Q05682 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.19□□□□□ -1.9
CALD1Q05682 AC092140.2-201ENST00000618027 521 ntBASIC3.19□□□□□ -1.9
CALD1Q05682 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CALD1Q05682 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CALD1Q05682 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.19□□□□□ -1.9
CALD1Q05682 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CALD1Q05682 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.18□□□□□ -1.9
CALD1Q05682 RNU6-288P-201ENST00000363690 104 ntBASIC3.18□□□□□ -1.9
CALD1Q05682 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.18□□□□□ -1.9
CALD1Q05682 Z99497.1-201ENST00000421282 135 ntBASIC3.18□□□□□ -1.9
CALD1Q05682 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CALD1Q05682 RPL36AP53-201ENST00000432891 316 ntBASIC3.18□□□□□ -1.9
CALD1Q05682 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.18□□□□□ -1.9
CALD1Q05682 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.18□□□□□ -1.9
CALD1Q05682 AL445567.1-201ENST00000439121 144 ntBASIC3.18□□□□□ -1.9
CALD1Q05682 RPS15AP7-201ENST00000439294 405 ntBASIC3.18□□□□□ -1.9
CALD1Q05682 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.18□□□□□ -1.9
CALD1Q05682 USP9YP12-201ENST00000450481 570 ntBASIC3.18□□□□□ -1.9
CALD1Q05682 SNORA59A-201ENST00000459326 152 ntBASIC3.18□□□□□ -1.9
CALD1Q05682 AC109486.1-201ENST00000486833 374 ntBASIC3.18□□□□□ -1.9
CALD1Q05682 AC008716.1-201ENST00000511084 513 ntBASIC3.18□□□□□ -1.9
CALD1Q05682 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
CALD1Q05682 IGLV3-17-201ENST00000519099 244 ntBASIC3.18□□□□□ -1.9
CALD1Q05682 AC022634.1-201ENST00000520765 532 ntBASIC3.18□□□□□ -1.9
CALD1Q05682 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.18□□□□□ -1.9
CALD1Q05682 AL603755.1-201ENST00000619504 163 ntBASIC3.18□□□□□ -1.9
CALD1Q05682 AC025034.2-201ENST00000623264 286 ntBASIC3.18□□□□□ -1.9
CALD1Q05682 MIR1291-201ENST00000627649 87 ntBASIC3.18□□□□□ -1.9
CALD1Q05682 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CALD1Q05682 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CALD1Q05682 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.18□□□□□ -1.9
CALD1Q05682 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.17□□□□□ -1.9
CALD1Q05682 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CALD1Q05682 SNORA67.1-201ENST00000364749 141 ntBASIC3.17□□□□□ -1.9
CALD1Q05682 SMIM11P1-201ENST00000369586 178 ntBASIC3.17□□□□□ -1.9
CALD1Q05682 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.17□□□□□ -1.9
CALD1Q05682 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.17□□□□□ -1.9
CALD1Q05682 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CALD1Q05682 RNU2-68P-201ENST00000410878 191 ntBASIC3.17□□□□□ -1.9
CALD1Q05682 RNU6-193P-201ENST00000410977 107 ntBASIC3.17□□□□□ -1.9
CALD1Q05682 AC023141.4-201ENST00000412031 328 ntBASIC3.17□□□□□ -1.9
CALD1Q05682 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.17□□□□□ -1.9
CALD1Q05682 MED14P1-201ENST00000430517 648 ntBASIC3.17□□□□□ -1.9
CALD1Q05682 RPS15AP5-201ENST00000436276 388 ntBASIC3.17□□□□□ -1.9
CALD1Q05682 COX6CP12-201ENST00000446748 202 ntBASIC3.17□□□□□ -1.9
CALD1Q05682 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.17□□□□□ -1.9
CALD1Q05682 FABP5P15-201ENST00000453566 214 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms