Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 RPL21P23-201ENST00000446654 460 ntBASIC2.75□□□□□ -1.97
CX3CL1P78423 AL360271.2-201ENST00000447710 161 ntBASIC2.75□□□□□ -1.97
CX3CL1P78423 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.75□□□□□ -1.97
CX3CL1P78423 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.75□□□□□ -1.97
CX3CL1P78423 RPL26P9-201ENST00000457466 433 ntBASIC2.75□□□□□ -1.97
CX3CL1P78423 SNRPFP3-201ENST00000457792 225 ntBASIC2.75□□□□□ -1.97
CX3CL1P78423 AL121769.1-201ENST00000469473 401 ntBASIC2.75□□□□□ -1.97
CX3CL1P78423 AC022493.1-201ENST00000492984 337 ntBASIC2.75□□□□□ -1.97
CX3CL1P78423 RPS27AP10-201ENST00000496103 208 ntBASIC2.75□□□□□ -1.97
CX3CL1P78423 RNU6-703P-201ENST00000516946 107 ntBASIC2.75□□□□□ -1.97
CX3CL1P78423 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CX3CL1P78423 AC109635.3-201ENST00000529536 185 ntBASIC2.75□□□□□ -1.97
CX3CL1P78423 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.75□□□□□ -1.97
CX3CL1P78423 MIR5583-1-201ENST00000580941 59 ntBASIC2.75□□□□□ -1.97
CX3CL1P78423 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.75□□□□□ -1.97
CX3CL1P78423 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.75□□□□□ -1.97
CX3CL1P78423 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.75□□□□□ -1.97
CX3CL1P78423 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.75□□□□□ -1.97
CX3CL1P78423 AL162413.1-201ENST00000603198 110 ntBASIC2.75□□□□□ -1.97
CX3CL1P78423 AC012468.1-201ENST00000604888 430 ntBASIC2.75□□□□□ -1.97
CX3CL1P78423 SNORA51-201ENST00000606420 132 ntBASIC2.75□□□□□ -1.97
CX3CL1P78423 YWHAEP7-203ENST00000622054 312 ntBASIC2.75□□□□□ -1.97
CX3CL1P78423 AL357559.1-201ENST00000622228 274 ntBASIC2.75□□□□□ -1.97
CX3CL1P78423 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
CX3CL1P78423 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.75□□□□□ -1.97
CX3CL1P78423 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.75□□□□□ -1.97
CX3CL1P78423 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CX3CL1P78423 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CX3CL1P78423 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CX3CL1P78423 AC007496.3-201ENST00000624987 3443 ntBASIC2.74□□□□□ -1.97
CX3CL1P78423 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
CX3CL1P78423 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.74□□□□□ -1.97
CX3CL1P78423 NACAP2-201ENST00000318548 624 ntBASIC2.74□□□□□ -1.97
CX3CL1P78423 SNORD3E-201ENST00000362899 217 ntBASIC2.74□□□□□ -1.97
CX3CL1P78423 RNU6-715P-201ENST00000365204 103 ntBASIC2.74□□□□□ -1.97
CX3CL1P78423 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
CX3CL1P78423 Y_RNA.402-201ENST00000383972 102 ntBASIC2.74□□□□□ -1.97
CX3CL1P78423 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CX3CL1P78423 SNORD115-47-201ENST00000391226 86 ntBASIC2.74□□□□□ -1.97
CX3CL1P78423 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.74□□□□□ -1.97
CX3CL1P78423 RNU6-908P-201ENST00000410160 94 ntBASIC2.74□□□□□ -1.97
CX3CL1P78423 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.74□□□□□ -1.97
CX3CL1P78423 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.74□□□□□ -1.97
CX3CL1P78423 AL353729.1-201ENST00000425044 720 ntBASIC2.74□□□□□ -1.97
CX3CL1P78423 AC098614.2-201ENST00000426040 255 ntBASIC2.74□□□□□ -1.97
CX3CL1P78423 AC091286.1-201ENST00000431233 461 ntBASIC2.74□□□□□ -1.97
CX3CL1P78423 ATP5JP1-201ENST00000431631 322 ntBASIC2.74□□□□□ -1.97
CX3CL1P78423 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.74□□□□□ -1.97
CX3CL1P78423 BRK1P2-201ENST00000442875 223 ntBASIC2.74□□□□□ -1.97
CX3CL1P78423 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.74□□□□□ -1.97
CX3CL1P78423 RPL37P4-201ENST00000448908 268 ntBASIC2.74□□□□□ -1.97
CX3CL1P78423 RBMY2UP-201ENST00000453474 324 ntBASIC2.74□□□□□ -1.97
CX3CL1P78423 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.74□□□□□ -1.97
CX3CL1P78423 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.74□□□□□ -1.97
CX3CL1P78423 HMGN1P18-201ENST00000457642 277 ntBASIC2.74□□□□□ -1.97
CX3CL1P78423 RNU7-180P-201ENST00000459240 63 ntBASIC2.74□□□□□ -1.97
CX3CL1P78423 RNU7-23P-201ENST00000459465 62 ntBASIC2.74□□□□□ -1.97
CX3CL1P78423 RPL23AP67-201ENST00000465341 474 ntBASIC2.74□□□□□ -1.97
CX3CL1P78423 TRBV1-201ENST00000476502 284 ntBASIC2.74□□□□□ -1.97
CX3CL1P78423 AC112206.3-201ENST00000514578 389 ntBASIC2.74□□□□□ -1.97
CX3CL1P78423 RNA5SP401-201ENST00000515920 127 ntBASIC2.74□□□□□ -1.97
CX3CL1P78423 RNU6-718P-201ENST00000516166 105 ntBASIC2.74□□□□□ -1.97
CX3CL1P78423 SNORA64.4-201ENST00000516632 81 ntBASIC2.74□□□□□ -1.97
CX3CL1P78423 RNU6-572P-201ENST00000516724 80 ntBASIC2.74□□□□□ -1.97
CX3CL1P78423 SNORA31.19-201ENST00000517079 126 ntBASIC2.74□□□□□ -1.97
CX3CL1P78423 SNORA31.21-201ENST00000517180 77 ntBASIC2.74□□□□□ -1.97
CX3CL1P78423 RNA5SP380-201ENST00000517190 98 ntBASIC2.74□□□□□ -1.97
CX3CL1P78423 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.74□□□□□ -1.97
CX3CL1P78423 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.74□□□□□ -1.97
CX3CL1P78423 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.74□□□□□ -1.97
CX3CL1P78423 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.74□□□□□ -1.97
CX3CL1P78423 MTCO3P24-201ENST00000572729 782 ntBASIC2.74□□□□□ -1.97
CX3CL1P78423 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
CX3CL1P78423 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.74□□□□□ -1.97
CX3CL1P78423 AC006557.5-201ENST00000603126 811 ntBASIC2.74□□□□□ -1.97
CX3CL1P78423 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.74□□□□□ -1.97
CX3CL1P78423 AC024220.1-201ENST00000603675 484 ntBASIC2.74□□□□□ -1.97
CX3CL1P78423 AC092794.1-201ENST00000612734 582 ntBASIC2.74□□□□□ -1.97
CX3CL1P78423 AC026585.1-201ENST00000619582 524 ntBASIC2.74□□□□□ -1.97
CX3CL1P78423 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.74□□□□□ -1.97
CX3CL1P78423 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.74□□□□□ -1.97
CX3CL1P78423 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CX3CL1P78423 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CX3CL1P78423 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.74□□□□□ -1.97
CX3CL1P78423 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
CX3CL1P78423 SRP72P2-201ENST00000344851 1979 ntBASIC2.74□□□□□ -1.97
CX3CL1P78423 MTND5P7-201ENST00000413558 1798 ntBASIC2.74□□□□□ -1.97
CX3CL1P78423 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.73□□□□□ -1.97
CX3CL1P78423 AC032011.1-201ENST00000611703 1549 ntBASIC2.73□□□□□ -1.97
CX3CL1P78423 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.73□□□□□ -1.97
CX3CL1P78423 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CX3CL1P78423 RNY4P14-201ENST00000363656 96 ntBASIC2.73□□□□□ -1.97
CX3CL1P78423 RNU6-371P-201ENST00000364283 108 ntBASIC2.73□□□□□ -1.97
CX3CL1P78423 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CX3CL1P78423 RNU6-1127P-201ENST00000384580 107 ntBASIC2.73□□□□□ -1.97
CX3CL1P78423 RNU6-658P-201ENST00000384606 106 ntBASIC2.73□□□□□ -1.97
CX3CL1P78423 SNORA40C-201ENST00000391285 128 ntBASIC2.73□□□□□ -1.97
CX3CL1P78423 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.73□□□□□ -1.97
CX3CL1P78423 AL354719.1-201ENST00000406535 843 ntBASIC2.73□□□□□ -1.97
CX3CL1P78423 BX323014.1-201ENST00000412876 237 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms