Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
CLDN2P57739 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLDN2P57739 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CLDN2P57739 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CLDN2P57739 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CLDN2P57739 Y_RNA.89-201ENST00000363031 102 ntBASIC3.19□□□□□ -1.9
CLDN2P57739 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDN2P57739 AP002088.1-201ENST00000382740 395 ntBASIC3.19□□□□□ -1.9
CLDN2P57739 RNU6-550P-201ENST00000391057 101 ntBASIC3.19□□□□□ -1.9
CLDN2P57739 RNU6-903P-201ENST00000391270 109 ntBASIC3.19□□□□□ -1.9
CLDN2P57739 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.19□□□□□ -1.9
CLDN2P57739 MTCYBP8-201ENST00000422855 651 ntBASIC3.19□□□□□ -1.9
CLDN2P57739 ZNF863P-201ENST00000426746 417 ntBASIC3.19□□□□□ -1.9
CLDN2P57739 RPL23AP82-202ENST00000427528 469 ntBASIC3.19□□□□□ -1.9
CLDN2P57739 MRPS10P2-201ENST00000431226 381 ntBASIC3.19□□□□□ -1.9
CLDN2P57739 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDN2P57739 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDN2P57739 HMGB3P11-201ENST00000440127 604 ntBASIC3.19□□□□□ -1.9
CLDN2P57739 CALM1P1-201ENST00000442082 433 ntBASIC3.19□□□□□ -1.9
CLDN2P57739 AL590664.1-201ENST00000448065 339 ntBASIC3.19□□□□□ -1.9
CLDN2P57739 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDN2P57739 CENPBD1P1-201ENST00000464061 469 ntBASIC3.19□□□□□ -1.9
CLDN2P57739 MTCO3P38-201ENST00000468910 766 ntBASIC3.19□□□□□ -1.9
CLDN2P57739 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.19□□□□□ -1.9
CLDN2P57739 AL135752.1-201ENST00000479477 471 ntBASIC3.19□□□□□ -1.9
CLDN2P57739 EIF4EP3-201ENST00000498782 656 ntBASIC3.19□□□□□ -1.9
CLDN2P57739 AC109927.2-201ENST00000506416 303 ntBASIC3.19□□□□□ -1.9
CLDN2P57739 MIR2276-201ENST00000516886 89 ntBASIC3.19□□□□□ -1.9
CLDN2P57739 AC092325.1-201ENST00000566449 554 ntBASIC3.19□□□□□ -1.9
CLDN2P57739 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDN2P57739 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
CLDN2P57739 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.19□□□□□ -1.9
CLDN2P57739 AL451007.1-201ENST00000595491 289 ntBASIC3.19□□□□□ -1.9
CLDN2P57739 AC136601.2-201ENST00000604356 474 ntBASIC3.19□□□□□ -1.9
CLDN2P57739 AC110741.2-201ENST00000605278 268 ntBASIC3.19□□□□□ -1.9
CLDN2P57739 AL670379.4-201ENST00000605279 254 ntBASIC3.19□□□□□ -1.9
CLDN2P57739 MIR15A-201ENST00000607334 83 ntBASIC3.19□□□□□ -1.9
CLDN2P57739 AC135507.2-201ENST00000612443 309 ntBASIC3.19□□□□□ -1.9
CLDN2P57739 ATP5A1P2-202ENST00000616464 443 ntBASIC3.19□□□□□ -1.9
CLDN2P57739 SNORD39.4-201ENST00000620099 78 ntBASIC3.19□□□□□ -1.9
CLDN2P57739 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDN2P57739 MTND4P14-201ENST00000435799 1354 ntBASIC3.19□□□□□ -1.9
CLDN2P57739 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLDN2P57739 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
CLDN2P57739 AL365361.1-201ENST00000566942 3481 ntBASIC3.18□□□□□ -1.9
CLDN2P57739 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CLDN2P57739 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN2P57739 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN2P57739 RNY3P3-201ENST00000363816 102 ntBASIC3.18□□□□□ -1.9
CLDN2P57739 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN2P57739 RNU6-877P-201ENST00000383868 107 ntBASIC3.18□□□□□ -1.9
CLDN2P57739 RNU6-217P-201ENST00000384164 104 ntBASIC3.18□□□□□ -1.9
CLDN2P57739 CISD1P1-201ENST00000393907 327 ntBASIC3.18□□□□□ -1.9
CLDN2P57739 AL122016.1-201ENST00000403365 367 ntBASIC3.18□□□□□ -1.9
CLDN2P57739 AL354719.1-201ENST00000406535 843 ntBASIC3.18□□□□□ -1.9
CLDN2P57739 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN2P57739 RNA5SP111-201ENST00000411386 101 ntBASIC3.18□□□□□ -1.9
CLDN2P57739 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN2P57739 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN2P57739 AL160275.3-201ENST00000423876 471 ntBASIC3.18□□□□□ -1.9
CLDN2P57739 AC012498.1-201ENST00000424037 437 ntBASIC3.18□□□□□ -1.9
CLDN2P57739 AL592045.1-201ENST00000429867 352 ntBASIC3.18□□□□□ -1.9
CLDN2P57739 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.18□□□□□ -1.9
CLDN2P57739 AL353705.1-201ENST00000433468 480 ntBASIC3.18□□□□□ -1.9
CLDN2P57739 AC104058.1-201ENST00000448028 297 ntBASIC3.18□□□□□ -1.9
CLDN2P57739 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN2P57739 AL118520.1-201ENST00000450770 291 ntBASIC3.18□□□□□ -1.9
CLDN2P57739 SSXP4-201ENST00000451349 245 ntBASIC3.18□□□□□ -1.9
CLDN2P57739 SNRPFP3-201ENST00000457792 225 ntBASIC3.18□□□□□ -1.9
CLDN2P57739 S100A11P2-201ENST00000467589 312 ntBASIC3.18□□□□□ -1.9
CLDN2P57739 RPL27AP5-201ENST00000469428 449 ntBASIC3.18□□□□□ -1.9
CLDN2P57739 AL049873.1-201ENST00000480540 376 ntBASIC3.18□□□□□ -1.9
CLDN2P57739 AC092989.1-201ENST00000481235 277 ntBASIC3.18□□□□□ -1.9
CLDN2P57739 RPL30P14-201ENST00000482744 348 ntBASIC3.18□□□□□ -1.9
CLDN2P57739 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN2P57739 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN2P57739 SNORD60.2-201ENST00000516883 86 ntBASIC3.18□□□□□ -1.9
CLDN2P57739 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN2P57739 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.18□□□□□ -1.9
CLDN2P57739 AC011602.1-201ENST00000546484 331 ntBASIC3.18□□□□□ -1.9
CLDN2P57739 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN2P57739 HIF1AP1-201ENST00000553642 175 ntBASIC3.18□□□□□ -1.9
CLDN2P57739 TGIF1P1-201ENST00000558095 802 ntBASIC3.18□□□□□ -1.9
CLDN2P57739 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN2P57739 MIR4801-201ENST00000582704 82 ntBASIC3.18□□□□□ -1.9
CLDN2P57739 UBL5P2-201ENST00000583788 219 ntBASIC3.18□□□□□ -1.9
CLDN2P57739 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.18□□□□□ -1.9
CLDN2P57739 NRBF2P5-201ENST00000603087 788 ntBASIC3.18□□□□□ -1.9
CLDN2P57739 AC008962.1-201ENST00000605729 304 ntBASIC3.18□□□□□ -1.9
CLDN2P57739 DISC2.1-201ENST00000612827 205 ntBASIC3.18□□□□□ -1.9
CLDN2P57739 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN2P57739 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN2P57739 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN2P57739 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN2P57739 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN2P57739 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN2P57739 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN2P57739 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN2P57739 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN2P57739 RNU6-534P-201ENST00000364877 106 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms