Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 RPL21P5-201ENST00000554662 472 ntBASIC2.67□□□□□ -1.98
HMGCS2P54868 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.67□□□□□ -1.98
HMGCS2P54868 AC025281.1-201ENST00000567026 265 ntBASIC2.67□□□□□ -1.98
HMGCS2P54868 DEFB122-202ENST00000569013 197 ntBASIC2.67□□□□□ -1.98
HMGCS2P54868 MIR3146-201ENST00000580367 79 ntBASIC2.67□□□□□ -1.98
HMGCS2P54868 AC105224.1-201ENST00000587055 421 ntBASIC2.67□□□□□ -1.98
HMGCS2P54868 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.67□□□□□ -1.98
HMGCS2P54868 AC078899.3-201ENST00000599065 212 ntBASIC2.67□□□□□ -1.98
HMGCS2P54868 AC087752.4-201ENST00000605911 462 ntBASIC2.67□□□□□ -1.98
HMGCS2P54868 RN7SKP299-201ENST00000606679 301 ntBASIC2.67□□□□□ -1.98
HMGCS2P54868 AC245517.5-201ENST00000611529 162 ntBASIC2.67□□□□□ -1.98
HMGCS2P54868 AC091304.9-201ENST00000612091 226 ntBASIC2.67□□□□□ -1.98
HMGCS2P54868 TUG1_2.1-201ENST00000614234 87 ntBASIC2.67□□□□□ -1.98
HMGCS2P54868 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.67□□□□□ -1.98
HMGCS2P54868 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.67□□□□□ -1.98
HMGCS2P54868 AC027309.3-201ENST00000623419 351 ntBASIC2.67□□□□□ -1.98
HMGCS2P54868 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.67□□□□□ -1.98
HMGCS2P54868 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HMGCS2P54868 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
HMGCS2P54868 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HMGCS2P54868 RNU5A-8P-201ENST00000364102 114 ntBASIC2.66□□□□□ -1.98
HMGCS2P54868 SNORA23-201ENST00000365128 182 ntBASIC2.66□□□□□ -1.98
HMGCS2P54868 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.66□□□□□ -1.98
HMGCS2P54868 RNU6-432P-201ENST00000384196 109 ntBASIC2.66□□□□□ -1.98
HMGCS2P54868 SNORA64-201ENST00000384674 134 ntBASIC2.66□□□□□ -1.98
HMGCS2P54868 RNU6-1197P-201ENST00000391183 107 ntBASIC2.66□□□□□ -1.98
HMGCS2P54868 HMGN1P14-201ENST00000412459 517 ntBASIC2.66□□□□□ -1.98
HMGCS2P54868 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.66□□□□□ -1.98
HMGCS2P54868 BTF3L4P1-201ENST00000413813 468 ntBASIC2.66□□□□□ -1.98
HMGCS2P54868 AL589872.1-201ENST00000426602 288 ntBASIC2.66□□□□□ -1.98
HMGCS2P54868 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.66□□□□□ -1.98
HMGCS2P54868 AL353706.1-201ENST00000436728 494 ntBASIC2.66□□□□□ -1.98
HMGCS2P54868 RPL35AP22-201ENST00000436855 335 ntBASIC2.66□□□□□ -1.98
HMGCS2P54868 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.66□□□□□ -1.98
HMGCS2P54868 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.66□□□□□ -1.98
HMGCS2P54868 MTND6P13-201ENST00000443510 523 ntBASIC2.66□□□□□ -1.98
HMGCS2P54868 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.66□□□□□ -1.98
HMGCS2P54868 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.66□□□□□ -1.98
HMGCS2P54868 SNRPGP6-201ENST00000451124 220 ntBASIC2.66□□□□□ -1.98
HMGCS2P54868 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.66□□□□□ -1.98
HMGCS2P54868 RAP1BP2-201ENST00000478270 544 ntBASIC2.66□□□□□ -1.98
HMGCS2P54868 RPL21P99-201ENST00000480369 423 ntBASIC2.66□□□□□ -1.98
HMGCS2P54868 RPL23AP41-201ENST00000484754 458 ntBASIC2.66□□□□□ -1.98
HMGCS2P54868 AC108210.2-201ENST00000503681 201 ntBASIC2.66□□□□□ -1.98
HMGCS2P54868 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.66□□□□□ -1.98
HMGCS2P54868 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.66□□□□□ -1.98
HMGCS2P54868 RNU6-56P-201ENST00000516986 93 ntBASIC2.66□□□□□ -1.98
HMGCS2P54868 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.66□□□□□ -1.98
HMGCS2P54868 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.66□□□□□ -1.98
HMGCS2P54868 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.66□□□□□ -1.98
HMGCS2P54868 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.66□□□□□ -1.98
HMGCS2P54868 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.66□□□□□ -1.98
HMGCS2P54868 AC005951.2-201ENST00000576282 495 ntBASIC2.66□□□□□ -1.98
HMGCS2P54868 AC005771.1-201ENST00000585581 349 ntBASIC2.66□□□□□ -1.98
HMGCS2P54868 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.66□□□□□ -1.98
HMGCS2P54868 PISRT1-201ENST00000626175 531 ntBASIC2.66□□□□□ -1.98
HMGCS2P54868 AC110994.2-201ENST00000635481 492 ntBASIC2.66□□□□□ -1.98
HMGCS2P54868 AC090582.1-201ENST00000636321 199 ntBASIC2.66□□□□□ -1.98
HMGCS2P54868 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.66□□□□□ -1.98
HMGCS2P54868 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
HMGCS2P54868 TEX21P-201ENST00000447107 1476 ntBASIC2.65□□□□□ -1.98
HMGCS2P54868 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.65□□□□□ -1.98
HMGCS2P54868 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.65□□□□□ -1.99
HMGCS2P54868 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.65□□□□□ -1.99
HMGCS2P54868 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HMGCS2P54868 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.65□□□□□ -1.99
HMGCS2P54868 RNU1-39P-201ENST00000383897 165 ntBASIC2.65□□□□□ -1.99
HMGCS2P54868 RNU6-348P-201ENST00000384386 107 ntBASIC2.65□□□□□ -1.99
HMGCS2P54868 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
HMGCS2P54868 AL109755.1-201ENST00000401791 649 ntBASIC2.65□□□□□ -1.99
HMGCS2P54868 RPS3AP3-201ENST00000411933 242 ntBASIC2.65□□□□□ -1.99
HMGCS2P54868 UBE2FP1-201ENST00000416536 447 ntBASIC2.65□□□□□ -1.99
HMGCS2P54868 AC006366.1-201ENST00000422002 759 ntBASIC2.65□□□□□ -1.99
HMGCS2P54868 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.65□□□□□ -1.99
HMGCS2P54868 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.65□□□□□ -1.99
HMGCS2P54868 AC005094.1-201ENST00000440420 368 ntBASIC2.65□□□□□ -1.99
HMGCS2P54868 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.65□□□□□ -1.99
HMGCS2P54868 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.65□□□□□ -1.99
HMGCS2P54868 RNU7-59P-201ENST00000459101 61 ntBASIC2.65□□□□□ -1.99
HMGCS2P54868 RPL9P33-201ENST00000484311 566 ntBASIC2.65□□□□□ -1.99
HMGCS2P54868 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HMGCS2P54868 AC079140.3-201ENST00000511111 550 ntBASIC2.65□□□□□ -1.99
HMGCS2P54868 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.65□□□□□ -1.99
HMGCS2P54868 RNU2-46P-201ENST00000517038 113 ntBASIC2.65□□□□□ -1.99
HMGCS2P54868 AC007536.1-201ENST00000533382 349 ntBASIC2.65□□□□□ -1.99
HMGCS2P54868 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.65□□□□□ -1.99
HMGCS2P54868 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.65□□□□□ -1.99
HMGCS2P54868 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.65□□□□□ -1.99
HMGCS2P54868 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.65□□□□□ -1.99
HMGCS2P54868 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.65□□□□□ -1.99
HMGCS2P54868 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.65□□□□□ -1.99
HMGCS2P54868 AC006362.1-201ENST00000567392 174 ntBASIC2.65□□□□□ -1.99
HMGCS2P54868 MIR4293-201ENST00000584305 78 ntBASIC2.65□□□□□ -1.99
HMGCS2P54868 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.65□□□□□ -1.99
HMGCS2P54868 BNIP3P8-201ENST00000597863 560 ntBASIC2.65□□□□□ -1.99
HMGCS2P54868 AC064872.1-201ENST00000604823 1072 ntBASIC2.65□□□□□ -1.99
HMGCS2P54868 RNU6-87P-201ENST00000607561 108 ntBASIC2.65□□□□□ -1.99
HMGCS2P54868 AC004908.2-201ENST00000609090 574 ntBASIC2.65□□□□□ -1.99
HMGCS2P54868 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
HMGCS2P54868 AL136313.1-201ENST00000624804 202 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms