Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 SNORA70.16-201ENST00000516390 95 ntBASIC4.83□□□□□ -1.64
EPHA4P54764 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.83□□□□□ -1.64
EPHA4P54764 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.83□□□□□ -1.64
EPHA4P54764 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.83□□□□□ -1.64
EPHA4P54764 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.83□□□□□ -1.64
EPHA4P54764 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.83□□□□□ -1.64
EPHA4P54764 AC024581.2-201ENST00000619986 252 ntBASIC4.83□□□□□ -1.64
EPHA4P54764 CR381572.2-201ENST00000624852 397 ntBASIC4.83□□□□□ -1.64
EPHA4P54764 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
EPHA4P54764 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.83□□□□□ -1.64
EPHA4P54764 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
EPHA4P54764 AC008079.2-201ENST00000623543 20396 ntBASIC4.83□□□□□ -1.64
EPHA4P54764 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.83□□□□□ -1.64
EPHA4P54764 Z95331.1-201ENST00000623075 23112 ntBASIC4.82□□□□□ -1.64
EPHA4P54764 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
EPHA4P54764 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
EPHA4P54764 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
EPHA4P54764 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
EPHA4P54764 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.82□□□□□ -1.64
EPHA4P54764 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
EPHA4P54764 RNU6-318P-201ENST00000384283 103 ntBASIC4.82□□□□□ -1.64
EPHA4P54764 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
EPHA4P54764 RNU6-493P-201ENST00000391321 108 ntBASIC4.82□□□□□ -1.64
EPHA4P54764 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
EPHA4P54764 AL035079.1-201ENST00000405210 287 ntBASIC4.82□□□□□ -1.64
EPHA4P54764 MIR1271-201ENST00000408537 86 ntBASIC4.82□□□□□ -1.64
EPHA4P54764 RNA5SP31-201ENST00000411144 127 ntBASIC4.82□□□□□ -1.64
EPHA4P54764 AC007395.1-201ENST00000451333 677 ntBASIC4.82□□□□□ -1.64
EPHA4P54764 AC073901.1-201ENST00000462471 408 ntBASIC4.82□□□□□ -1.64
EPHA4P54764 HMGB1P22-201ENST00000505315 124 ntBASIC4.82□□□□□ -1.64
EPHA4P54764 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.82□□□□□ -1.64
EPHA4P54764 LINC00933-203ENST00000559812 219 ntBASIC4.82□□□□□ -1.64
EPHA4P54764 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.82□□□□□ -1.64
EPHA4P54764 MIR3667-201ENST00000581025 74 ntBASIC4.82□□□□□ -1.64
EPHA4P54764 RN7SL435P-201ENST00000584418 282 ntBASIC4.82□□□□□ -1.64
EPHA4P54764 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.82□□□□□ -1.64
EPHA4P54764 AC136601.2-201ENST00000604356 474 ntBASIC4.82□□□□□ -1.64
EPHA4P54764 AL590392.1-201ENST00000604960 446 ntBASIC4.82□□□□□ -1.64
EPHA4P54764 AC008785.1-201ENST00000624475 456 ntBASIC4.82□□□□□ -1.64
EPHA4P54764 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.82□□□□□ -1.64
EPHA4P54764 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
EPHA4P54764 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.82□□□□□ -1.64
EPHA4P54764 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.82□□□□□ -1.64
EPHA4P54764 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.82□□□□□ -1.64
EPHA4P54764 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
EPHA4P54764 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
EPHA4P54764 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
EPHA4P54764 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
EPHA4P54764 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
EPHA4P54764 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
EPHA4P54764 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
EPHA4P54764 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
EPHA4P54764 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
EPHA4P54764 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
EPHA4P54764 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
EPHA4P54764 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.81□□□□□ -1.64
EPHA4P54764 U3.15-201ENST00000365398 212 ntBASIC4.81□□□□□ -1.64
EPHA4P54764 SNORA46.1-201ENST00000391069 153 ntBASIC4.81□□□□□ -1.64
EPHA4P54764 RNU4-30P-201ENST00000410245 143 ntBASIC4.81□□□□□ -1.64
EPHA4P54764 RNA5SP113-201ENST00000410486 84 ntBASIC4.81□□□□□ -1.64
EPHA4P54764 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.81□□□□□ -1.64
EPHA4P54764 RPL23AP81-201ENST00000455252 467 ntBASIC4.81□□□□□ -1.64
EPHA4P54764 AC117440.1-201ENST00000474107 571 ntBASIC4.81□□□□□ -1.64
EPHA4P54764 RPL7P47-201ENST00000497299 556 ntBASIC4.81□□□□□ -1.64
EPHA4P54764 UBE2CP3-201ENST00000502715 450 ntBASIC4.81□□□□□ -1.64
EPHA4P54764 RN7SKP49-201ENST00000516675 260 ntBASIC4.81□□□□□ -1.64
EPHA4P54764 AC016256.1-201ENST00000547971 354 ntBASIC4.81□□□□□ -1.64
EPHA4P54764 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.81□□□□□ -1.64
EPHA4P54764 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.81□□□□□ -1.64
EPHA4P54764 AL356157.2-201ENST00000605122 111 ntBASIC4.81□□□□□ -1.64
EPHA4P54764 AL391358.1-201ENST00000605342 190 ntBASIC4.81□□□□□ -1.64
EPHA4P54764 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.81□□□□□ -1.64
EPHA4P54764 AC005296.1-201ENST00000616145 209 ntBASIC4.81□□□□□ -1.64
EPHA4P54764 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.81□□□□□ -1.64
EPHA4P54764 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.81□□□□□ -1.64
EPHA4P54764 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
EPHA4P54764 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
EPHA4P54764 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
EPHA4P54764 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
EPHA4P54764 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.8□□□□□ -1.64
EPHA4P54764 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
EPHA4P54764 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
EPHA4P54764 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
EPHA4P54764 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.8□□□□□ -1.64
EPHA4P54764 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
EPHA4P54764 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.8□□□□□ -1.64
EPHA4P54764 RNVU1-6-201ENST00000364688 164 ntBASIC4.8□□□□□ -1.64
EPHA4P54764 Y_RNA.275-201ENST00000364726 110 ntBASIC4.8□□□□□ -1.64
EPHA4P54764 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
EPHA4P54764 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.8□□□□□ -1.64
EPHA4P54764 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.8□□□□□ -1.64
EPHA4P54764 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.8□□□□□ -1.64
EPHA4P54764 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.8□□□□□ -1.64
EPHA4P54764 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.8□□□□□ -1.64
EPHA4P54764 RPS29P26-201ENST00000477483 171 ntBASIC4.8□□□□□ -1.64
EPHA4P54764 RNU6-1198P-201ENST00000516904 67 ntBASIC4.8□□□□□ -1.64
EPHA4P54764 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.8□□□□□ -1.64
EPHA4P54764 AC090281.1-201ENST00000523019 276 ntBASIC4.8□□□□□ -1.64
EPHA4P54764 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.8□□□□□ -1.64
EPHA4P54764 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms