Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 RNU7-110P-201ENST00000516891 62 ntBASIC6.15□□□□□ -1.42
PRIM1P49642 SNORA31.18-201ENST00000517043 134 ntBASIC6.15□□□□□ -1.42
PRIM1P49642 AC022968.1-201ENST00000567372 442 ntBASIC6.15□□□□□ -1.42
PRIM1P49642 MIR4423-201ENST00000580922 80 ntBASIC6.15□□□□□ -1.42
PRIM1P49642 AL161798.1-201ENST00000604630 131 ntBASIC6.15□□□□□ -1.42
PRIM1P49642 ARF4P1-201ENST00000605447 541 ntBASIC6.15□□□□□ -1.42
PRIM1P49642 ZYXP1-201ENST00000617638 118 ntBASIC6.15□□□□□ -1.42
PRIM1P49642 OR14L1P-202ENST00000641545 3009 ntBASIC6.15□□□□□ -1.43
PRIM1P49642 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC6.15□□□□□ -1.43
PRIM1P49642 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PRIM1P49642 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
PRIM1P49642 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PRIM1P49642 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PRIM1P49642 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PRIM1P49642 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC6.14□□□□□ -1.43
PRIM1P49642 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PRIM1P49642 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
PRIM1P49642 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC6.14□□□□□ -1.43
PRIM1P49642 CARF-208ENST00000428585 2513 ntTSL 2 BASIC6.14□□□□□ -1.43
PRIM1P49642 RNU6-17P-201ENST00000384245 107 ntBASIC6.14□□□□□ -1.43
PRIM1P49642 RNU6-843P-201ENST00000384454 104 ntBASIC6.14□□□□□ -1.43
PRIM1P49642 SNORA70E-201ENST00000384492 135 ntBASIC6.14□□□□□ -1.43
PRIM1P49642 RNU6-18P-201ENST00000384527 107 ntBASIC6.14□□□□□ -1.43
PRIM1P49642 RN7SKP267-201ENST00000410381 285 ntBASIC6.14□□□□□ -1.43
PRIM1P49642 MAP1LC3BP1-201ENST00000417653 379 ntBASIC6.14□□□□□ -1.43
PRIM1P49642 AC104333.2-201ENST00000422630 192 ntBASIC6.14□□□□□ -1.43
PRIM1P49642 MTCO1P39-201ENST00000426148 480 ntBASIC6.14□□□□□ -1.43
PRIM1P49642 EIF4A1P11-201ENST00000451239 222 ntBASIC6.14□□□□□ -1.43
PRIM1P49642 AC073901.1-201ENST00000462471 408 ntBASIC6.14□□□□□ -1.43
PRIM1P49642 TOMM22P6-201ENST00000465035 409 ntBASIC6.14□□□□□ -1.43
PRIM1P49642 RPL21P126-201ENST00000470049 478 ntBASIC6.14□□□□□ -1.43
PRIM1P49642 RPL21P129-201ENST00000491732 478 ntBASIC6.14□□□□□ -1.43
PRIM1P49642 AC091167.1-201ENST00000492017 396 ntBASIC6.14□□□□□ -1.43
PRIM1P49642 RNA5SP471-201ENST00000516971 106 ntBASIC6.14□□□□□ -1.43
PRIM1P49642 AC008694.2-201ENST00000517591 306 ntBASIC6.14□□□□□ -1.43
PRIM1P49642 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC6.14□□□□□ -1.43
PRIM1P49642 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC6.14□□□□□ -1.43
PRIM1P49642 AP005019.3-201ENST00000620418 560 ntBASIC6.14□□□□□ -1.43
PRIM1P49642 FAP-203ENST00000443424 2598 ntTSL 2 BASIC6.14□□□□□ -1.43
PRIM1P49642 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
PRIM1P49642 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PRIM1P49642 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.14□□□□□ -1.43
PRIM1P49642 HSP90AA4P-202ENST00000506915 2228 ntBASIC6.14□□□□□ -1.43
PRIM1P49642 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
PRIM1P49642 RBBP8P1-201ENST00000449447 1844 ntBASIC6.13□□□□□ -1.43
PRIM1P49642 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC6.13□□□□□ -1.43
PRIM1P49642 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
PRIM1P49642 Y_RNA.136-201ENST00000363444 102 ntBASIC6.13□□□□□ -1.43
PRIM1P49642 Y_RNA.262-201ENST00000364641 102 ntBASIC6.13□□□□□ -1.43
PRIM1P49642 SNORA70C-201ENST00000384538 135 ntBASIC6.13□□□□□ -1.43
PRIM1P49642 AL356387.2-201ENST00000422272 243 ntBASIC6.13□□□□□ -1.43
PRIM1P49642 FPGT-203ENST00000467578 601 ntTSL 2 BASIC6.13□□□□□ -1.43
PRIM1P49642 RN7SL303P-201ENST00000469773 251 ntBASIC6.13□□□□□ -1.43
PRIM1P49642 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC6.13□□□□□ -1.43
PRIM1P49642 IGLVIV-65-201ENST00000517313 360 ntBASIC6.13□□□□□ -1.43
PRIM1P49642 AC067852.4-201ENST00000590314 478 ntBASIC6.13□□□□□ -1.43
PRIM1P49642 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC6.13□□□□□ -1.43
PRIM1P49642 AC099506.2-201ENST00000623074 221 ntBASIC6.13□□□□□ -1.43
PRIM1P49642 RNF123-214ENST00000629802 207 ntTSL 5 BASIC6.13□□□□□ -1.43
PRIM1P49642 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.13□□□□□ -1.43
PRIM1P49642 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.13□□□□□ -1.43
PRIM1P49642 ZNF137P-201ENST00000456718 1920 ntBASIC6.13□□□□□ -1.43
PRIM1P49642 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PRIM1P49642 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
PRIM1P49642 LINC01109-201ENST00000603837 3081 ntBASIC6.12□□□□□ -1.43
PRIM1P49642 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PRIM1P49642 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
PRIM1P49642 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PRIM1P49642 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
PRIM1P49642 RNU6-879P-201ENST00000364328 108 ntBASIC6.12□□□□□ -1.43
PRIM1P49642 Y_RNA.230-201ENST00000364348 109 ntBASIC6.12□□□□□ -1.43
PRIM1P49642 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
PRIM1P49642 Y_RNA.488-201ENST00000384403 102 ntBASIC6.12□□□□□ -1.43
PRIM1P49642 SNORA22C-201ENST00000384614 134 ntBASIC6.12□□□□□ -1.43
PRIM1P49642 MIR659-201ENST00000384963 97 ntBASIC6.12□□□□□ -1.43
PRIM1P49642 MIR10A-201ENST00000385043 110 ntBASIC6.12□□□□□ -1.43
PRIM1P49642 MIR23A-201ENST00000385245 73 ntBASIC6.12□□□□□ -1.43
PRIM1P49642 RNU1-139P-201ENST00000391307 165 ntBASIC6.12□□□□□ -1.43
PRIM1P49642 RPS4XP3-201ENST00000398541 413 ntBASIC6.12□□□□□ -1.43
PRIM1P49642 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC6.12□□□□□ -1.43
PRIM1P49642 AC063976.2-201ENST00000425667 3556 ntBASIC6.12□□□□□ -1.43
PRIM1P49642 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PRIM1P49642 RPL36AP41-201ENST00000493820 306 ntBASIC6.12□□□□□ -1.43
PRIM1P49642 AC091959.1-201ENST00000495857 238 ntBASIC6.12□□□□□ -1.43
PRIM1P49642 RNU6-1219P-201ENST00000516143 112 ntBASIC6.12□□□□□ -1.43
PRIM1P49642 RNU6-709P-201ENST00000517257 104 ntBASIC6.12□□□□□ -1.43
PRIM1P49642 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC6.12□□□□□ -1.43
PRIM1P49642 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
PRIM1P49642 AC034105.4-201ENST00000568304 277 ntBASIC6.12□□□□□ -1.43
PRIM1P49642 AC009812.4-201ENST00000569134 1805 ntBASIC6.12□□□□□ -1.43
PRIM1P49642 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC6.12□□□□□ -1.43
PRIM1P49642 BRDTP1-201ENST00000605735 677 ntBASIC6.12□□□□□ -1.43
PRIM1P49642 AL445567.2-201ENST00000618935 498 ntBASIC6.12□□□□□ -1.43
PRIM1P49642 U3.53-201ENST00000628922 216 ntBASIC6.12□□□□□ -1.43
PRIM1P49642 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
PRIM1P49642 LYST-202ENST00000389794 12985 ntTSL 5 BASIC6.12□□□□□ -1.43
PRIM1P49642 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
PRIM1P49642 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PRIM1P49642 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
PRIM1P49642 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms