Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC0.96□□□□□ -2.26
CLIP1P30622 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
CLIP1P30622 AC098614.2-201ENST00000426040 255 ntBASIC0.96□□□□□ -2.26
CLIP1P30622 ZNF965P-201ENST00000432501 817 ntBASIC0.96□□□□□ -2.26
CLIP1P30622 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC0.96□□□□□ -2.26
CLIP1P30622 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.96□□□□□ -2.26
CLIP1P30622 AP003497.1-201ENST00000528472 562 ntBASIC0.96□□□□□ -2.26
CLIP1P30622 AC090888.1-201ENST00000561335 1141 ntBASIC0.96□□□□□ -2.26
CLIP1P30622 MTND4LP24-201ENST00000572277 291 ntBASIC0.96□□□□□ -2.26
CLIP1P30622 AC103810.8-201ENST00000607347 118 ntBASIC0.96□□□□□ -2.26
CLIP1P30622 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
CLIP1P30622 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CLIP1P30622 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
CLIP1P30622 SNORA25.8-201ENST00000364831 128 ntBASIC0.95□□□□□ -2.26
CLIP1P30622 RNU6-317P-201ENST00000384031 107 ntBASIC0.95□□□□□ -2.26
CLIP1P30622 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CLIP1P30622 AC079776.3-201ENST00000450665 370 ntBASIC0.95□□□□□ -2.26
CLIP1P30622 AL359385.1-201ENST00000456509 365 ntBASIC0.95□□□□□ -2.26
CLIP1P30622 DYNLL1P5-201ENST00000467158 270 ntBASIC0.95□□□□□ -2.26
CLIP1P30622 AC108157.1-201ENST00000510511 539 ntBASIC0.95□□□□□ -2.26
CLIP1P30622 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CLIP1P30622 OR5B19P-201ENST00000531766 928 ntBASIC0.95□□□□□ -2.26
CLIP1P30622 HSPE1P19-201ENST00000603327 295 ntBASIC0.95□□□□□ -2.26
CLIP1P30622 AC243829.3-201ENST00000622177 108 ntBASIC0.95□□□□□ -2.26
CLIP1P30622 AP000776.1-201ENST00000530032 1663 ntBASIC0.95□□□□□ -2.26
CLIP1P30622 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC0.95□□□□□ -2.26
CLIP1P30622 AC123912.3-201ENST00000600907 1367 ntBASIC0.95□□□□□ -2.26
CLIP1P30622 RNU5D-1-201ENST00000363299 116 ntBASIC0.94□□□□□ -2.26
CLIP1P30622 Y_RNA.458-201ENST00000384240 102 ntBASIC0.94□□□□□ -2.26
CLIP1P30622 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.94□□□□□ -2.26
CLIP1P30622 AC093106.2-201ENST00000428212 385 ntBASIC0.94□□□□□ -2.26
CLIP1P30622 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.94□□□□□ -2.26
CLIP1P30622 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.94□□□□□ -2.26
CLIP1P30622 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC0.94□□□□□ -2.26
CLIP1P30622 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC0.94□□□□□ -2.26
CLIP1P30622 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
CLIP1P30622 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
CLIP1P30622 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.94□□□□□ -2.26
CLIP1P30622 AC004808.1-201ENST00000627671 721 ntBASIC0.94□□□□□ -2.26
CLIP1P30622 RNU6-1293P-201ENST00000384077 107 ntBASIC0.93□□□□□ -2.26
CLIP1P30622 AC012497.1-201ENST00000429392 575 ntBASIC0.93□□□□□ -2.26
CLIP1P30622 AC092628.1-201ENST00000436250 252 ntBASIC0.93□□□□□ -2.26
CLIP1P30622 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
CLIP1P30622 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC0.93□□□□□ -2.26
CLIP1P30622 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
CLIP1P30622 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.93□□□□□ -2.26
CLIP1P30622 RNU6-496P-201ENST00000516145 99 ntBASIC0.93□□□□□ -2.26
CLIP1P30622 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.93□□□□□ -2.26
CLIP1P30622 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.93□□□□□ -2.26
CLIP1P30622 AC090666.1-201ENST00000578241 445 ntBASIC0.93□□□□□ -2.26
CLIP1P30622 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.93□□□□□ -2.26
CLIP1P30622 GAS5-AS1-201ENST00000602767 694 ntBASIC0.93□□□□□ -2.26
CLIP1P30622 AC006270.3-201ENST00000605967 1036 ntBASIC0.93□□□□□ -2.26
CLIP1P30622 MIR2909-201ENST00000617113 69 ntBASIC0.93□□□□□ -2.26
CLIP1P30622 RNU6-156P-201ENST00000621869 107 ntBASIC0.93□□□□□ -2.26
CLIP1P30622 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.92□□□□□ -2.26
CLIP1P30622 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.92□□□□□ -2.26
CLIP1P30622 PNPLA4P1-201ENST00000458328 305 ntBASIC0.92□□□□□ -2.26
CLIP1P30622 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.92□□□□□ -2.26
CLIP1P30622 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
CLIP1P30622 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC0.92□□□□□ -2.26
CLIP1P30622 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC0.92□□□□□ -2.26
CLIP1P30622 AC087481.2-201ENST00000565492 330 ntBASIC0.92□□□□□ -2.26
CLIP1P30622 AL009028.1-201ENST00000604895 802 ntBASIC0.92□□□□□ -2.26
CLIP1P30622 AL360181.4-201ENST00000621752 134 ntBASIC0.92□□□□□ -2.26
CLIP1P30622 RN7SKP200-201ENST00000410564 320 ntBASIC0.91□□□□□ -2.26
CLIP1P30622 AC018630.2-202ENST00000422992 927 ntBASIC0.91□□□□□ -2.26
CLIP1P30622 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC0.91□□□□□ -2.26
CLIP1P30622 snoU13.7-201ENST00000459220 104 ntBASIC0.91□□□□□ -2.26
CLIP1P30622 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.91□□□□□ -2.26
CLIP1P30622 CBX3P3-201ENST00000508108 532 ntBASIC0.91□□□□□ -2.26
CLIP1P30622 RNU6-362P-201ENST00000516736 90 ntBASIC0.91□□□□□ -2.26
CLIP1P30622 SNORA44.1-201ENST00000517031 108 ntBASIC0.91□□□□□ -2.26
CLIP1P30622 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC0.91□□□□□ -2.26
CLIP1P30622 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
CLIP1P30622 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC0.91□□□□□ -2.26
CLIP1P30622 MIR4713-201ENST00000582691 75 ntBASIC0.91□□□□□ -2.26
CLIP1P30622 AP001330.4-201ENST00000604350 154 ntBASIC0.91□□□□□ -2.26
CLIP1P30622 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
CLIP1P30622 RNU6-263P-201ENST00000363811 107 ntBASIC0.9□□□□□ -2.26
CLIP1P30622 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.9□□□□□ -2.26
CLIP1P30622 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.9□□□□□ -2.26
CLIP1P30622 DYNLT3P2-201ENST00000442517 295 ntBASIC0.9□□□□□ -2.26
CLIP1P30622 AC107626.1-201ENST00000471084 183 ntBASIC0.9□□□□□ -2.26
CLIP1P30622 AC016065.2-201ENST00000514530 444 ntBASIC0.9□□□□□ -2.26
CLIP1P30622 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC0.9□□□□□ -2.26
CLIP1P30622 NIFKP8-201ENST00000560500 874 ntBASIC0.9□□□□□ -2.26
CLIP1P30622 AC011260.1-201ENST00000578420 472 ntBASIC0.9□□□□□ -2.26
CLIP1P30622 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC0.9□□□□□ -2.26
CLIP1P30622 ELL2P3-201ENST00000457883 1602 ntBASIC0.9□□□□□ -2.27
CLIP1P30622 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
CLIP1P30622 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
CLIP1P30622 AC092634.2-201ENST00000428146 1010 ntBASIC0.89□□□□□ -2.27
CLIP1P30622 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC0.89□□□□□ -2.27
CLIP1P30622 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.89□□□□□ -2.27
CLIP1P30622 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC0.89□□□□□ -2.27
CLIP1P30622 RNA5SP395-201ENST00000516567 118 ntBASIC0.89□□□□□ -2.27
CLIP1P30622 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.89□□□□□ -2.27
CLIP1P30622 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.89□□□□□ -2.27
CLIP1P30622 AL355802.3-201ENST00000607571 545 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms