Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 AC091133.4-201ENST00000511142 308 ntBASIC3.35□□□□□ -1.87
CD53P19397 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.35□□□□□ -1.87
CD53P19397 AC025755.1-201ENST00000521306 278 ntBASIC3.35□□□□□ -1.87
CD53P19397 AC134698.4-201ENST00000523451 826 ntBASIC3.35□□□□□ -1.87
CD53P19397 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.35□□□□□ -1.87
CD53P19397 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.35□□□□□ -1.87
CD53P19397 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.35□□□□□ -1.87
CD53P19397 ZNF519P2-201ENST00000557032 169 ntBASIC3.35□□□□□ -1.87
CD53P19397 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.35□□□□□ -1.87
CD53P19397 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.35□□□□□ -1.87
CD53P19397 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.35□□□□□ -1.87
CD53P19397 MIR1273C-201ENST00000578669 77 ntBASIC3.35□□□□□ -1.87
CD53P19397 AC090616.3-201ENST00000582184 217 ntBASIC3.35□□□□□ -1.87
CD53P19397 AC007938.3-201ENST00000604965 623 ntBASIC3.35□□□□□ -1.87
CD53P19397 MIR15A-201ENST00000607334 83 ntBASIC3.35□□□□□ -1.87
CD53P19397 U3.45-201ENST00000607547 219 ntBASIC3.35□□□□□ -1.87
CD53P19397 AC091304.9-201ENST00000612091 226 ntBASIC3.35□□□□□ -1.87
CD53P19397 AL133173.2-201ENST00000614270 90 ntBASIC3.35□□□□□ -1.87
CD53P19397 AC090517.2-201ENST00000614966 680 ntBASIC3.35□□□□□ -1.87
CD53P19397 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CD53P19397 SNORD39.4-201ENST00000620099 78 ntBASIC3.35□□□□□ -1.87
CD53P19397 U6.105-201ENST00000637379 88 ntBASIC3.35□□□□□ -1.87
CD53P19397 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
CD53P19397 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.35□□□□□ -1.87
CD53P19397 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CD53P19397 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.34□□□□□ -1.87
CD53P19397 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CD53P19397 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CD53P19397 MTND5P27-201ENST00000428871 1720 ntBASIC3.34□□□□□ -1.87
CD53P19397 MTND5P30-201ENST00000452896 1731 ntBASIC3.34□□□□□ -1.87
CD53P19397 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.34□□□□□ -1.87
CD53P19397 Y_RNA.33-201ENST00000362591 102 ntBASIC3.34□□□□□ -1.87
CD53P19397 RNU4-12P-201ENST00000365233 139 ntBASIC3.34□□□□□ -1.87
CD53P19397 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.34□□□□□ -1.87
CD53P19397 MIR558-201ENST00000384920 94 ntBASIC3.34□□□□□ -1.87
CD53P19397 MIR147B-201ENST00000390185 80 ntBASIC3.34□□□□□ -1.87
CD53P19397 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.34□□□□□ -1.87
CD53P19397 AL356057.2-201ENST00000403318 432 ntBASIC3.34□□□□□ -1.87
CD53P19397 RNU6-1025P-201ENST00000410629 104 ntBASIC3.34□□□□□ -1.87
CD53P19397 AC092809.3-201ENST00000415453 231 ntBASIC3.34□□□□□ -1.87
CD53P19397 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.34□□□□□ -1.87
CD53P19397 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.34□□□□□ -1.87
CD53P19397 PTGES3P4-201ENST00000426243 356 ntBASIC3.34□□□□□ -1.87
CD53P19397 AC007560.1-201ENST00000426912 237 ntBASIC3.34□□□□□ -1.87
CD53P19397 AL591419.1-201ENST00000427423 339 ntBASIC3.34□□□□□ -1.87
CD53P19397 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.34□□□□□ -1.87
CD53P19397 AL445687.1-201ENST00000439946 251 ntBASIC3.34□□□□□ -1.87
CD53P19397 Z99127.3-201ENST00000448158 395 ntBASIC3.34□□□□□ -1.87
CD53P19397 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.34□□□□□ -1.87
CD53P19397 AL133162.1-201ENST00000463228 453 ntBASIC3.34□□□□□ -1.87
CD53P19397 AC004924.1-201ENST00000480160 781 ntBASIC3.34□□□□□ -1.87
CD53P19397 RN7SL293P-201ENST00000481765 281 ntBASIC3.34□□□□□ -1.87
CD53P19397 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CD53P19397 AC010493.1-201ENST00000513479 292 ntBASIC3.34□□□□□ -1.87
CD53P19397 Vault.3-201ENST00000516676 95 ntBASIC3.34□□□□□ -1.87
CD53P19397 SNORA31.19-201ENST00000517079 126 ntBASIC3.34□□□□□ -1.87
CD53P19397 AC009902.1-201ENST00000519351 183 ntBASIC3.34□□□□□ -1.87
CD53P19397 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.34□□□□□ -1.87
CD53P19397 ADI1P3-201ENST00000549509 470 ntBASIC3.34□□□□□ -1.87
CD53P19397 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.34□□□□□ -1.87
CD53P19397 NRBF2P1-201ENST00000587407 859 ntBASIC3.34□□□□□ -1.87
CD53P19397 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.34□□□□□ -1.87
CD53P19397 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CD53P19397 MIR98-201ENST00000606724 119 ntBASIC3.34□□□□□ -1.87
CD53P19397 AC124864.2-201ENST00000624736 186 ntBASIC3.34□□□□□ -1.87
CD53P19397 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.34□□□□□ -1.87
CD53P19397 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.34□□□□□ -1.87
CD53P19397 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CD53P19397 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
CD53P19397 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CD53P19397 MTCO1P12-201ENST00000414273 1543 ntBASIC3.34□□□□□ -1.88
CD53P19397 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CD53P19397 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.33□□□□□ -1.88
CD53P19397 Y_RNA.248-201ENST00000364501 109 ntBASIC3.33□□□□□ -1.88
CD53P19397 SNORA4.3-201ENST00000365564 137 ntBASIC3.33□□□□□ -1.88
CD53P19397 RNU6-39P-201ENST00000384344 107 ntBASIC3.33□□□□□ -1.88
CD53P19397 SNORD115-47-201ENST00000391226 86 ntBASIC3.33□□□□□ -1.88
CD53P19397 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.33□□□□□ -1.88
CD53P19397 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.33□□□□□ -1.88
CD53P19397 AL139247.1-201ENST00000422768 325 ntBASIC3.33□□□□□ -1.88
CD53P19397 AP000907.1-201ENST00000428428 510 ntBASIC3.33□□□□□ -1.88
CD53P19397 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.33□□□□□ -1.88
CD53P19397 AL078601.1-201ENST00000444542 271 ntBASIC3.33□□□□□ -1.88
CD53P19397 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.33□□□□□ -1.88
CD53P19397 AC106707.2-201ENST00000484182 374 ntBASIC3.33□□□□□ -1.88
CD53P19397 AC108078.1-201ENST00000508073 725 ntBASIC3.33□□□□□ -1.88
CD53P19397 SCARNA14-201ENST00000516903 136 ntBASIC3.33□□□□□ -1.88
CD53P19397 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.33□□□□□ -1.88
CD53P19397 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.33□□□□□ -1.88
CD53P19397 LINC00933-203ENST00000559812 219 ntBASIC3.33□□□□□ -1.88
CD53P19397 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.33□□□□□ -1.88
CD53P19397 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.33□□□□□ -1.88
CD53P19397 AC005261.5-201ENST00000596280 355 ntBASIC3.33□□□□□ -1.88
CD53P19397 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.33□□□□□ -1.88
CD53P19397 AC136475.10-201ENST00000620253 385 ntBASIC3.33□□□□□ -1.88
CD53P19397 AC073534.2-201ENST00000620377 381 ntBASIC3.33□□□□□ -1.88
CD53P19397 AL732372.2-225ENST00000642124 456 ntBASIC3.33□□□□□ -1.88
CD53P19397 MTND5P1-201ENST00000445440 1375 ntBASIC3.33□□□□□ -1.88
CD53P19397 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CD53P19397 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms