Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.41□□□□□ -1.7
ITGA4P13612 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.41□□□□□ -1.7
ITGA4P13612 FTH1P25-201ENST00000447665 469 ntBASIC4.41□□□□□ -1.7
ITGA4P13612 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.41□□□□□ -1.7
ITGA4P13612 HMGB3P30-201ENST00000457863 606 ntBASIC4.41□□□□□ -1.7
ITGA4P13612 SNORA84-201ENST00000459229 133 ntBASIC4.41□□□□□ -1.7
ITGA4P13612 AC146944.2-203ENST00000502493 354 ntBASIC4.41□□□□□ -1.7
ITGA4P13612 AC139495.1-202ENST00000513164 354 ntBASIC4.41□□□□□ -1.7
ITGA4P13612 MTCO2P24-201ENST00000515611 426 ntBASIC4.41□□□□□ -1.7
ITGA4P13612 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.41□□□□□ -1.7
ITGA4P13612 RNU6-307P-201ENST00000516743 106 ntBASIC4.41□□□□□ -1.7
ITGA4P13612 IGKV2D-23-201ENST00000518179 286 ntBASIC4.41□□□□□ -1.7
ITGA4P13612 AC023442.1-201ENST00000531247 422 ntBASIC4.41□□□□□ -1.7
ITGA4P13612 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.41□□□□□ -1.7
ITGA4P13612 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.41□□□□□ -1.7
ITGA4P13612 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.41□□□□□ -1.7
ITGA4P13612 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
ITGA4P13612 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.41□□□□□ -1.7
ITGA4P13612 AL157871.3-201ENST00000557231 293 ntBASIC4.41□□□□□ -1.7
ITGA4P13612 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.41□□□□□ -1.7
ITGA4P13612 AC109446.1-201ENST00000566172 220 ntBASIC4.41□□□□□ -1.7
ITGA4P13612 OR1M4P-201ENST00000589199 287 ntBASIC4.41□□□□□ -1.7
ITGA4P13612 AC005255.1-201ENST00000593748 216 ntBASIC4.41□□□□□ -1.7
ITGA4P13612 AC006006.1-201ENST00000603082 144 ntBASIC4.41□□□□□ -1.7
ITGA4P13612 AL161798.1-201ENST00000604630 131 ntBASIC4.41□□□□□ -1.7
ITGA4P13612 SNORD39.4-201ENST00000620099 78 ntBASIC4.41□□□□□ -1.7
ITGA4P13612 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.41□□□□□ -1.7
ITGA4P13612 AC067931.1-201ENST00000624190 671 ntBASIC4.41□□□□□ -1.7
ITGA4P13612 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
ITGA4P13612 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
ITGA4P13612 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ITGA4P13612 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
ITGA4P13612 AL356489.2-201ENST00000566968 3528 ntBASIC4.41□□□□□ -1.7
ITGA4P13612 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ITGA4P13612 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.4□□□□□ -1.7
ITGA4P13612 AC018555.1-201ENST00000567548 1980 ntBASIC4.4□□□□□ -1.7
ITGA4P13612 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.7
ITGA4P13612 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
ITGA4P13612 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
ITGA4P13612 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
ITGA4P13612 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.4□□□□□ -1.71
ITGA4P13612 Y_RNA.324-201ENST00000365165 102 ntBASIC4.4□□□□□ -1.71
ITGA4P13612 Y_RNA.428-201ENST00000384078 102 ntBASIC4.4□□□□□ -1.71
ITGA4P13612 MIR554-201ENST00000384874 96 ntBASIC4.4□□□□□ -1.71
ITGA4P13612 AL445529.1-201ENST00000398713 389 ntBASIC4.4□□□□□ -1.71
ITGA4P13612 RNU6-55P-201ENST00000411092 107 ntBASIC4.4□□□□□ -1.71
ITGA4P13612 CYCSP19-201ENST00000411715 316 ntBASIC4.4□□□□□ -1.71
ITGA4P13612 HMGB3P2-201ENST00000411913 584 ntBASIC4.4□□□□□ -1.71
ITGA4P13612 RPS15AP6-201ENST00000420703 385 ntBASIC4.4□□□□□ -1.71
ITGA4P13612 UBE2D3P2-201ENST00000424409 445 ntBASIC4.4□□□□□ -1.71
ITGA4P13612 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.4□□□□□ -1.71
ITGA4P13612 RPS24P13-201ENST00000442520 397 ntBASIC4.4□□□□□ -1.71
ITGA4P13612 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.4□□□□□ -1.71
ITGA4P13612 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.4□□□□□ -1.71
ITGA4P13612 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.4□□□□□ -1.71
ITGA4P13612 HMGB1P22-201ENST00000505315 124 ntBASIC4.4□□□□□ -1.71
ITGA4P13612 RNU1-86P-201ENST00000516108 154 ntBASIC4.4□□□□□ -1.71
ITGA4P13612 RNU1-107P-201ENST00000516617 154 ntBASIC4.4□□□□□ -1.71
ITGA4P13612 RNU7-143P-201ENST00000516781 65 ntBASIC4.4□□□□□ -1.71
ITGA4P13612 SNORD116.3-201ENST00000517176 78 ntBASIC4.4□□□□□ -1.71
ITGA4P13612 RNU1-45P-201ENST00000517191 141 ntBASIC4.4□□□□□ -1.71
ITGA4P13612 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.4□□□□□ -1.71
ITGA4P13612 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ITGA4P13612 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.4□□□□□ -1.71
ITGA4P13612 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.4□□□□□ -1.71
ITGA4P13612 AC005899.2-201ENST00000584353 90 ntBASIC4.4□□□□□ -1.71
ITGA4P13612 MIR3149-201ENST00000584629 83 ntBASIC4.4□□□□□ -1.71
ITGA4P13612 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.4□□□□□ -1.71
ITGA4P13612 AL360181.4-201ENST00000621752 134 ntBASIC4.4□□□□□ -1.71
ITGA4P13612 AC119674.1-207ENST00000641355 633 ntBASIC4.4□□□□□ -1.71
ITGA4P13612 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
ITGA4P13612 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ITGA4P13612 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
ITGA4P13612 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
ITGA4P13612 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.4□□□□□ -1.71
ITGA4P13612 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.4□□□□□ -1.71
ITGA4P13612 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
ITGA4P13612 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ITGA4P13612 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ITGA4P13612 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
ITGA4P13612 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.39□□□□□ -1.71
ITGA4P13612 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
ITGA4P13612 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.39□□□□□ -1.71
ITGA4P13612 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
ITGA4P13612 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
ITGA4P13612 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
ITGA4P13612 MIR301A-201ENST00000385261 86 ntBASIC4.39□□□□□ -1.71
ITGA4P13612 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
ITGA4P13612 SNORA3C-201ENST00000408792 125 ntBASIC4.39□□□□□ -1.71
ITGA4P13612 AC096664.2-201ENST00000411843 406 ntBASIC4.39□□□□□ -1.71
ITGA4P13612 SYF2P2-201ENST00000417620 583 ntBASIC4.39□□□□□ -1.71
ITGA4P13612 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.39□□□□□ -1.71
ITGA4P13612 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.39□□□□□ -1.71
ITGA4P13612 TBCAP1-201ENST00000436520 327 ntBASIC4.39□□□□□ -1.71
ITGA4P13612 PCMTD1P1-201ENST00000455560 355 ntBASIC4.39□□□□□ -1.71
ITGA4P13612 RN7SL542P-201ENST00000467147 294 ntBASIC4.39□□□□□ -1.71
ITGA4P13612 AC128713.1-201ENST00000471495 306 ntBASIC4.39□□□□□ -1.71
ITGA4P13612 HMGB1P30-201ENST00000492455 606 ntBASIC4.39□□□□□ -1.71
ITGA4P13612 AC015911.1-201ENST00000495111 156 ntBASIC4.39□□□□□ -1.71
ITGA4P13612 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms