Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 SNORD115-3-201ENST00000363100 82 ntBASIC1.08□□□□□ -2.24
HMGN1P05114 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
HMGN1P05114 MIR95-201ENST00000385072 81 ntBASIC1.08□□□□□ -2.24
HMGN1P05114 RNU2-33P-201ENST00000410344 192 ntBASIC1.08□□□□□ -2.24
HMGN1P05114 OR51A5P-201ENST00000415429 942 ntBASIC1.08□□□□□ -2.24
HMGN1P05114 CCDC58P2-201ENST00000417131 366 ntBASIC1.08□□□□□ -2.24
HMGN1P05114 AL591704.2-201ENST00000421658 181 ntBASIC1.08□□□□□ -2.24
HMGN1P05114 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.08□□□□□ -2.24
HMGN1P05114 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.08□□□□□ -2.24
HMGN1P05114 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.08□□□□□ -2.24
HMGN1P05114 AC005908.1-201ENST00000468701 347 ntBASIC1.08□□□□□ -2.24
HMGN1P05114 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.08□□□□□ -2.24
HMGN1P05114 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.08□□□□□ -2.24
HMGN1P05114 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.08□□□□□ -2.24
HMGN1P05114 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.08□□□□□ -2.24
HMGN1P05114 AC073413.2-201ENST00000604332 360 ntBASIC1.08□□□□□ -2.24
HMGN1P05114 AC004067.1-201ENST00000608733 700 ntBASIC1.08□□□□□ -2.24
HMGN1P05114 AP005229.2-201ENST00000609980 697 ntBASIC1.08□□□□□ -2.24
HMGN1P05114 AC013412.1-201ENST00000610687 192 ntBASIC1.08□□□□□ -2.24
HMGN1P05114 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.08□□□□□ -2.24
HMGN1P05114 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
HMGN1P05114 MTCO1P23-201ENST00000415223 1526 ntBASIC1.07□□□□□ -2.24
HMGN1P05114 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
HMGN1P05114 RPL17P50-201ENST00000396131 546 ntBASIC1.07□□□□□ -2.24
HMGN1P05114 MIR1289-2-201ENST00000408360 111 ntBASIC1.07□□□□□ -2.24
HMGN1P05114 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.07□□□□□ -2.24
HMGN1P05114 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.07□□□□□ -2.24
HMGN1P05114 AL691517.1-201ENST00000440833 1235 ntBASIC1.07□□□□□ -2.24
HMGN1P05114 RPS29P28-201ENST00000446439 141 ntBASIC1.07□□□□□ -2.24
HMGN1P05114 AC245517.4-201ENST00000448601 281 ntBASIC1.07□□□□□ -2.24
HMGN1P05114 AL513124.1-201ENST00000450410 614 ntBASIC1.07□□□□□ -2.24
HMGN1P05114 RPS29P29-201ENST00000456396 171 ntBASIC1.07□□□□□ -2.24
HMGN1P05114 FCF1P6-201ENST00000456841 595 ntBASIC1.07□□□□□ -2.24
HMGN1P05114 snoU13.9-201ENST00000458927 103 ntBASIC1.07□□□□□ -2.24
HMGN1P05114 COX7A2P2-201ENST00000505291 250 ntBASIC1.07□□□□□ -2.24
HMGN1P05114 RNU6-902P-201ENST00000517212 91 ntBASIC1.07□□□□□ -2.24
HMGN1P05114 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.07□□□□□ -2.24
HMGN1P05114 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.07□□□□□ -2.24
HMGN1P05114 AC025811.1-201ENST00000604312 472 ntBASIC1.07□□□□□ -2.24
HMGN1P05114 AC136601.2-201ENST00000604356 474 ntBASIC1.07□□□□□ -2.24
HMGN1P05114 AC242628.1-201ENST00000606810 391 ntBASIC1.07□□□□□ -2.24
HMGN1P05114 MIR8074-201ENST00000615081 81 ntBASIC1.07□□□□□ -2.24
HMGN1P05114 AC119674.1-220ENST00000641502 1048 ntBASIC1.07□□□□□ -2.24
HMGN1P05114 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.07□□□□□ -2.24
HMGN1P05114 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
HMGN1P05114 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
HMGN1P05114 MTND5P9-201ENST00000503854 1755 ntBASIC1.06□□□□□ -2.24
HMGN1P05114 Z75746.1-201ENST00000440243 2080 ntBASIC1.06□□□□□ -2.24
HMGN1P05114 SNORA62.1-201ENST00000364287 154 ntBASIC1.06□□□□□ -2.24
HMGN1P05114 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
HMGN1P05114 RNU6-878P-201ENST00000384578 110 ntBASIC1.06□□□□□ -2.24
HMGN1P05114 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
HMGN1P05114 MIR1285-1-201ENST00000408593 84 ntBASIC1.06□□□□□ -2.24
HMGN1P05114 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC1.06□□□□□ -2.24
HMGN1P05114 AC017099.1-201ENST00000448261 1028 ntBASIC1.06□□□□□ -2.24
HMGN1P05114 KATNBL1P6-201ENST00000453433 915 ntBASIC1.06□□□□□ -2.24
HMGN1P05114 AP001324.2-201ENST00000461163 319 ntBASIC1.06□□□□□ -2.24
HMGN1P05114 AC018868.1-201ENST00000491307 315 ntBASIC1.06□□□□□ -2.24
HMGN1P05114 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC1.06□□□□□ -2.24
HMGN1P05114 RNU6-548P-201ENST00000517083 115 ntBASIC1.06□□□□□ -2.24
HMGN1P05114 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC1.06□□□□□ -2.24
HMGN1P05114 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.06□□□□□ -2.24
HMGN1P05114 AC006199.1-201ENST00000548728 219 ntBASIC1.06□□□□□ -2.24
HMGN1P05114 AL132857.1-201ENST00000555180 708 ntBASIC1.06□□□□□ -2.24
HMGN1P05114 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.06□□□□□ -2.24
HMGN1P05114 MIR3167-201ENST00000579623 85 ntBASIC1.06□□□□□ -2.24
HMGN1P05114 AC023043.2-201ENST00000589678 1026 ntBASIC1.06□□□□□ -2.24
HMGN1P05114 AC005261.5-201ENST00000596280 355 ntBASIC1.06□□□□□ -2.24
HMGN1P05114 AC021646.1-201ENST00000605469 484 ntBASIC1.06□□□□□ -2.24
HMGN1P05114 AP000560.1-201ENST00000624150 1937 ntBASIC1.06□□□□□ -2.24
HMGN1P05114 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
HMGN1P05114 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
HMGN1P05114 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
HMGN1P05114 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
HMGN1P05114 MTND5P25-201ENST00000430499 799 ntBASIC1.05□□□□□ -2.24
HMGN1P05114 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.05□□□□□ -2.24
HMGN1P05114 AL121594.1-201ENST00000475906 575 ntBASIC1.05□□□□□ -2.24
HMGN1P05114 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.05□□□□□ -2.24
HMGN1P05114 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.05□□□□□ -2.24
HMGN1P05114 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.05□□□□□ -2.24
HMGN1P05114 MTCYBP16-201ENST00000509187 1129 ntBASIC1.05□□□□□ -2.24
HMGN1P05114 SNORA48.9-201ENST00000516419 162 ntBASIC1.05□□□□□ -2.24
HMGN1P05114 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.05□□□□□ -2.24
HMGN1P05114 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.05□□□□□ -2.24
HMGN1P05114 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
HMGN1P05114 AC005668.1-201ENST00000571142 476 ntBASIC1.05□□□□□ -2.24
HMGN1P05114 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.05□□□□□ -2.24
HMGN1P05114 MIR4303-201ENST00000581299 66 ntBASIC1.05□□□□□ -2.24
HMGN1P05114 AC092953.2-201ENST00000608000 699 ntBASIC1.05□□□□□ -2.24
HMGN1P05114 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC1.05□□□□□ -2.24
HMGN1P05114 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
HMGN1P05114 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
HMGN1P05114 RNU4-91P-201ENST00000364778 135 ntBASIC1.04□□□□□ -2.24
HMGN1P05114 RNU11-3P-201ENST00000391111 133 ntBASIC1.04□□□□□ -2.24
HMGN1P05114 USP9YP19-201ENST00000412165 485 ntBASIC1.04□□□□□ -2.24
HMGN1P05114 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.04□□□□□ -2.24
HMGN1P05114 USP9YP13-201ENST00000417797 480 ntBASIC1.04□□□□□ -2.24
HMGN1P05114 AC008850.1-201ENST00000427546 362 ntBASIC1.04□□□□□ -2.24
HMGN1P05114 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.04□□□□□ -2.24
HMGN1P05114 SNORA59A-201ENST00000459326 152 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms