Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.99□□□□□ -2.09
HLA-DPB1P04440 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.99□□□□□ -2.09
HLA-DPB1P04440 AC068587.2-201ENST00000478386 781 ntBASIC1.99□□□□□ -2.09
HLA-DPB1P04440 AC090096.1-201ENST00000489168 390 ntBASIC1.99□□□□□ -2.09
HLA-DPB1P04440 EIF4EP3-201ENST00000498782 656 ntBASIC1.99□□□□□ -2.09
HLA-DPB1P04440 RNU1-40P-201ENST00000516816 164 ntBASIC1.99□□□□□ -2.09
HLA-DPB1P04440 RNU1-97P-201ENST00000516872 164 ntBASIC1.99□□□□□ -2.09
HLA-DPB1P04440 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.99□□□□□ -2.09
HLA-DPB1P04440 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.99□□□□□ -2.09
HLA-DPB1P04440 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
HLA-DPB1P04440 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
HLA-DPB1P04440 ZNF519P3-201ENST00000557158 1032 ntBASIC1.99□□□□□ -2.09
HLA-DPB1P04440 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.99□□□□□ -2.09
HLA-DPB1P04440 MIR5194-201ENST00000582634 120 ntBASIC1.99□□□□□ -2.09
HLA-DPB1P04440 MIR4760-201ENST00000585040 80 ntBASIC1.99□□□□□ -2.09
HLA-DPB1P04440 KC877982.1-201ENST00000602313 470 ntBASIC1.99□□□□□ -2.09
HLA-DPB1P04440 AL358072.1-201ENST00000604156 575 ntBASIC1.99□□□□□ -2.09
HLA-DPB1P04440 AC007363.1-201ENST00000604736 620 ntBASIC1.99□□□□□ -2.09
HLA-DPB1P04440 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.99□□□□□ -2.09
HLA-DPB1P04440 AC090970.3-201ENST00000612566 866 ntBASIC1.99□□□□□ -2.09
HLA-DPB1P04440 MIR6895-201ENST00000613497 78 ntBASIC1.99□□□□□ -2.09
HLA-DPB1P04440 AC017037.3-201ENST00000625016 472 ntBASIC1.99□□□□□ -2.09
HLA-DPB1P04440 AC104454.1-201ENST00000421341 1401 ntBASIC1.99□□□□□ -2.09
HLA-DPB1P04440 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
HLA-DPB1P04440 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
HLA-DPB1P04440 AL139276.1-201ENST00000311910 1001 ntBASIC1.98□□□□□ -2.09
HLA-DPB1P04440 RNU6-500P-201ENST00000362349 107 ntBASIC1.98□□□□□ -2.09
HLA-DPB1P04440 RNU4-82P-201ENST00000362443 140 ntBASIC1.98□□□□□ -2.09
HLA-DPB1P04440 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.98□□□□□ -2.09
HLA-DPB1P04440 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
HLA-DPB1P04440 RNU6-750P-201ENST00000390946 107 ntBASIC1.98□□□□□ -2.09
HLA-DPB1P04440 RNU2-68P-201ENST00000410878 191 ntBASIC1.98□□□□□ -2.09
HLA-DPB1P04440 HMGB3P2-201ENST00000411913 584 ntBASIC1.98□□□□□ -2.09
HLA-DPB1P04440 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.98□□□□□ -2.09
HLA-DPB1P04440 RPL17P12-201ENST00000413391 526 ntBASIC1.98□□□□□ -2.09
HLA-DPB1P04440 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.98□□□□□ -2.09
HLA-DPB1P04440 HIGD1AP15-201ENST00000416198 280 ntBASIC1.98□□□□□ -2.09
HLA-DPB1P04440 ZNF90P2-204ENST00000419323 1075 ntBASIC1.98□□□□□ -2.09
HLA-DPB1P04440 RPS27AP14-201ENST00000422868 454 ntBASIC1.98□□□□□ -2.09
HLA-DPB1P04440 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.98□□□□□ -2.09
HLA-DPB1P04440 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.98□□□□□ -2.09
HLA-DPB1P04440 AC104651.1-201ENST00000427559 735 ntBASIC1.98□□□□□ -2.09
HLA-DPB1P04440 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HLA-DPB1P04440 RPL36AP53-201ENST00000432891 316 ntBASIC1.98□□□□□ -2.09
HLA-DPB1P04440 RPL37P21-201ENST00000435890 276 ntBASIC1.98□□□□□ -2.09
HLA-DPB1P04440 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.98□□□□□ -2.09
HLA-DPB1P04440 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.98□□□□□ -2.09
HLA-DPB1P04440 AL591719.1-201ENST00000444669 744 ntBASIC1.98□□□□□ -2.09
HLA-DPB1P04440 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.98□□□□□ -2.09
HLA-DPB1P04440 AC025033.1-201ENST00000463883 194 ntBASIC1.98□□□□□ -2.09
HLA-DPB1P04440 RBM43P1-201ENST00000476891 1081 ntBASIC1.98□□□□□ -2.09
HLA-DPB1P04440 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.98□□□□□ -2.09
HLA-DPB1P04440 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
HLA-DPB1P04440 IGLV3-17-201ENST00000519099 244 ntBASIC1.98□□□□□ -2.09
HLA-DPB1P04440 EEF1A1P37-201ENST00000522748 715 ntBASIC1.98□□□□□ -2.09
HLA-DPB1P04440 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.98□□□□□ -2.09
HLA-DPB1P04440 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.98□□□□□ -2.09
HLA-DPB1P04440 AC091489.2-201ENST00000566263 604 ntBASIC1.98□□□□□ -2.09
HLA-DPB1P04440 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.98□□□□□ -2.09
HLA-DPB1P04440 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
HLA-DPB1P04440 AC022022.2-201ENST00000602989 360 ntBASIC1.98□□□□□ -2.09
HLA-DPB1P04440 AL353778.1-201ENST00000603149 408 ntBASIC1.98□□□□□ -2.09
HLA-DPB1P04440 AP001981.2-201ENST00000603241 418 ntBASIC1.98□□□□□ -2.09
HLA-DPB1P04440 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.98□□□□□ -2.09
HLA-DPB1P04440 AC104010.1-201ENST00000616889 150 ntBASIC1.98□□□□□ -2.09
HLA-DPB1P04440 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.98□□□□□ -2.09
HLA-DPB1P04440 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
HLA-DPB1P04440 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HLA-DPB1P04440 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
HLA-DPB1P04440 AC110491.1-201ENST00000562191 2010 ntBASIC1.98□□□□□ -2.09
HLA-DPB1P04440 AL445523.1-201ENST00000451184 1362 ntBASIC1.98□□□□□ -2.09
HLA-DPB1P04440 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.97□□□□□ -2.09
HLA-DPB1P04440 RNU5F-6P-201ENST00000362979 116 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 RN7SKP226-201ENST00000364912 300 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 XGY1-201ENST00000381172 446 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
HLA-DPB1P04440 MTCYBP36-201ENST00000404146 440 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 AL021407.1-201ENST00000404531 386 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.97□□□□□ -2.09
HLA-DPB1P04440 ELOCP17-201ENST00000414751 326 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.97□□□□□ -2.09
HLA-DPB1P04440 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.97□□□□□ -2.09
HLA-DPB1P04440 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.97□□□□□ -2.09
HLA-DPB1P04440 AL353777.1-201ENST00000425552 326 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 MED14P1-201ENST00000430517 648 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 AC236972.1-201ENST00000433225 199 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 MTND5P2-201ENST00000442927 1142 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 NEFMP1-201ENST00000443423 1006 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 HIGD1AP2-201ENST00000446367 280 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 RNU6-717P-201ENST00000459076 104 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 AL121769.1-201ENST00000469473 401 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.97□□□□□ -2.09
HLA-DPB1P04440 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.97□□□□□ -2.09
HLA-DPB1P04440 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.97□□□□□ -2.09
HLA-DPB1P04440 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.97□□□□□ -2.09
HLA-DPB1P04440 SNORA31.6-201ENST00000516241 130 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 RNA5SP281-201ENST00000516504 135 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 RPPH1-2P-201ENST00000516688 293 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 RNU6-678P-201ENST00000516832 109 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms