Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.86□□□□□ -2.11
MT-ND4P03905 DUXAP8-207ENST00000456786 622 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 AP001486.1-201ENST00000463339 476 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 AC090515.1-201ENST00000465295 476 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 AC104685.1-201ENST00000502445 371 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.86□□□□□ -2.11
MT-ND4P03905 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
MT-ND4P03905 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.86□□□□□ -2.11
MT-ND4P03905 AC022447.1-201ENST00000515358 464 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 SNORA31.3-201ENST00000516029 96 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 DEFB108A-201ENST00000530110 222 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 AC068587.4-201ENST00000533893 186 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
MT-ND4P03905 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.86□□□□□ -2.11
MT-ND4P03905 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.86□□□□□ -2.11
MT-ND4P03905 MTND4P33-201ENST00000556706 766 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.86□□□□□ -2.11
MT-ND4P03905 MTND1P8-201ENST00000571424 950 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 AC007151.1-201ENST00000572774 483 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 MIR3162-201ENST00000581818 82 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.86□□□□□ -2.11
MT-ND4P03905 AC008749.1-201ENST00000597650 306 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 AL391813.1-201ENST00000603098 260 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 AC026790.2-201ENST00000606282 430 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 AC091965.4-201ENST00000607691 587 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 AC103710.1-201ENST00000610003 901 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 AC092106.3-201ENST00000611308 722 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 DUSP12P1-201ENST00000612874 516 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 AL161423.1-201ENST00000613700 262 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 AC009831.4-201ENST00000620744 325 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 AC025034.2-201ENST00000623264 286 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 AC091965.5-201ENST00000624785 342 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 AC243829.7-201ENST00000633081 225 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 MIR3199-2-201ENST00000636243 86 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 AC103706.2-201ENST00000638080 240 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 AC006927.4-201ENST00000639187 543 ntBASIC1.86□□□□□ -2.11
MT-ND4P03905 MTND4P16-201ENST00000466108 1367 ntBASIC1.85□□□□□ -2.11
MT-ND4P03905 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
MT-ND4P03905 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
MT-ND4P03905 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
MT-ND4P03905 RNU6-931P-201ENST00000363850 107 ntBASIC1.85□□□□□ -2.11
MT-ND4P03905 RNU5A-8P-201ENST00000364102 114 ntBASIC1.85□□□□□ -2.11
MT-ND4P03905 SNORA67.4-201ENST00000384688 142 ntBASIC1.85□□□□□ -2.11
MT-ND4P03905 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
MT-ND4P03905 AL021407.1-201ENST00000404531 386 ntBASIC1.85□□□□□ -2.11
MT-ND4P03905 CIR1P3-201ENST00000405137 479 ntBASIC1.85□□□□□ -2.11
MT-ND4P03905 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.85□□□□□ -2.11
MT-ND4P03905 SSR1P2-201ENST00000415208 787 ntBASIC1.85□□□□□ -2.11
MT-ND4P03905 CYCSP48-201ENST00000417124 323 ntBASIC1.85□□□□□ -2.11
MT-ND4P03905 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.85□□□□□ -2.11
MT-ND4P03905 AL109913.1-201ENST00000421173 514 ntBASIC1.85□□□□□ -2.11
MT-ND4P03905 AL353729.1-201ENST00000425044 720 ntBASIC1.85□□□□□ -2.11
MT-ND4P03905 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.85□□□□□ -2.11
MT-ND4P03905 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.85□□□□□ -2.11
MT-ND4P03905 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.85□□□□□ -2.11
MT-ND4P03905 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.85□□□□□ -2.11
MT-ND4P03905 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.85□□□□□ -2.11
MT-ND4P03905 AC072039.1-201ENST00000477611 581 ntBASIC1.85□□□□□ -2.11
MT-ND4P03905 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.85□□□□□ -2.11
MT-ND4P03905 AC139453.3-201ENST00000493276 369 ntBASIC1.85□□□□□ -2.11
MT-ND4P03905 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.85□□□□□ -2.11
MT-ND4P03905 AC114781.4-201ENST00000513707 639 ntBASIC1.85□□□□□ -2.11
MT-ND4P03905 RNA5SP281-201ENST00000516504 135 ntBASIC1.85□□□□□ -2.11
MT-ND4P03905 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.85□□□□□ -2.11
MT-ND4P03905 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.85□□□□□ -2.11
MT-ND4P03905 AC087276.1-201ENST00000529659 480 ntBASIC1.85□□□□□ -2.11
MT-ND4P03905 NACAP3-201ENST00000552100 481 ntBASIC1.85□□□□□ -2.11
MT-ND4P03905 AC021739.1-201ENST00000559631 174 ntBASIC1.85□□□□□ -2.11
MT-ND4P03905 AC074050.1-201ENST00000563247 211 ntBASIC1.85□□□□□ -2.11
MT-ND4P03905 MIR5571-201ENST00000577998 113 ntBASIC1.85□□□□□ -2.11
MT-ND4P03905 MIR3908-201ENST00000579798 126 ntBASIC1.85□□□□□ -2.11
MT-ND4P03905 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.85□□□□□ -2.11
MT-ND4P03905 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.85□□□□□ -2.11
MT-ND4P03905 AC008121.1-201ENST00000603244 268 ntBASIC1.85□□□□□ -2.11
MT-ND4P03905 AP001486.3-201ENST00000615334 372 ntBASIC1.85□□□□□ -2.11
MT-ND4P03905 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
MT-ND4P03905 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
MT-ND4P03905 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
MT-ND4P03905 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
MT-ND4P03905 AL109809.4-201ENST00000603520 2185 ntBASIC1.85□□□□□ -2.11
MT-ND4P03905 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.84□□□□□ -2.11
MT-ND4P03905 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
MT-ND4P03905 AL136360.1-201ENST00000503377 1900 ntBASIC1.84□□□□□ -2.11
MT-ND4P03905 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
MT-ND4P03905 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
MT-ND4P03905 RNU6-525P-201ENST00000363685 104 ntBASIC1.84□□□□□ -2.11
MT-ND4P03905 RNU6-1284P-201ENST00000363701 100 ntBASIC1.84□□□□□ -2.11
MT-ND4P03905 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.84□□□□□ -2.11
MT-ND4P03905 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
MT-ND4P03905 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
MT-ND4P03905 RNU6-1083P-201ENST00000384022 107 ntBASIC1.84□□□□□ -2.11
MT-ND4P03905 RNU6-14P-201ENST00000384630 106 ntBASIC1.84□□□□□ -2.11
MT-ND4P03905 MIR221-201ENST00000385135 110 ntBASIC1.84□□□□□ -2.11
MT-ND4P03905 RNU6-278P-201ENST00000390945 109 ntBASIC1.84□□□□□ -2.11
MT-ND4P03905 NDUFB4P4-201ENST00000404822 243 ntBASIC1.84□□□□□ -2.11
MT-ND4P03905 NDUFS5P1-201ENST00000405668 289 ntBASIC1.84□□□□□ -2.11
MT-ND4P03905 RNU2-40P-201ENST00000410833 196 ntBASIC1.84□□□□□ -2.11
MT-ND4P03905 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.84□□□□□ -2.11
MT-ND4P03905 AC005005.2-201ENST00000420779 380 ntBASIC1.84□□□□□ -2.11
MT-ND4P03905 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms