Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 MIR7515-201ENST00000637837 67 ntBASIC0.92□□□□□ -2.26
POLR1AO95602 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
POLR1AO95602 USP9YP33-201ENST00000412220 421 ntBASIC0.91□□□□□ -2.26
POLR1AO95602 RPL30P13-201ENST00000418873 348 ntBASIC0.91□□□□□ -2.26
POLR1AO95602 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.91□□□□□ -2.26
POLR1AO95602 EIF4EP4-201ENST00000424916 578 ntBASIC0.91□□□□□ -2.26
POLR1AO95602 USP9YP35-201ENST00000435696 412 ntBASIC0.91□□□□□ -2.26
POLR1AO95602 BX248409.1-201ENST00000455497 255 ntBASIC0.91□□□□□ -2.26
POLR1AO95602 OR5AL2P-201ENST00000532185 920 ntBASIC0.91□□□□□ -2.26
POLR1AO95602 LINC00933-203ENST00000559812 219 ntBASIC0.91□□□□□ -2.26
POLR1AO95602 AC087481.2-201ENST00000565492 330 ntBASIC0.91□□□□□ -2.26
POLR1AO95602 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.91□□□□□ -2.26
POLR1AO95602 AC106900.2-201ENST00000604994 317 ntBASIC0.91□□□□□ -2.26
POLR1AO95602 AL773524.1-201ENST00000614065 229 ntBASIC0.91□□□□□ -2.26
POLR1AO95602 AP003476.1-201ENST00000623984 516 ntBASIC0.91□□□□□ -2.26
POLR1AO95602 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.91□□□□□ -2.26
POLR1AO95602 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.26
POLR1AO95602 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
POLR1AO95602 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC0.9□□□□□ -2.27
POLR1AO95602 RPS3AP24-201ENST00000407896 734 ntBASIC0.9□□□□□ -2.27
POLR1AO95602 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC0.9□□□□□ -2.27
POLR1AO95602 MTCYBP29-201ENST00000436327 1006 ntBASIC0.9□□□□□ -2.27
POLR1AO95602 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC0.9□□□□□ -2.27
POLR1AO95602 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
POLR1AO95602 AP003355.1-201ENST00000518956 587 ntBASIC0.9□□□□□ -2.27
POLR1AO95602 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.9□□□□□ -2.27
POLR1AO95602 AC087359.1-201ENST00000508335 1740 ntBASIC0.9□□□□□ -2.27
POLR1AO95602 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC0.9□□□□□ -2.27
POLR1AO95602 HSBP1P2-201ENST00000299671 229 ntBASIC0.89□□□□□ -2.27
POLR1AO95602 FTH1P15-201ENST00000406984 280 ntBASIC0.89□□□□□ -2.27
POLR1AO95602 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC0.89□□□□□ -2.27
POLR1AO95602 AC021146.2-201ENST00000504736 556 ntBASIC0.89□□□□□ -2.27
POLR1AO95602 AC112518.2-201ENST00000508565 425 ntBASIC0.89□□□□□ -2.27
POLR1AO95602 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC0.89□□□□□ -2.27
POLR1AO95602 MIR6866-201ENST00000638146 69 ntBASIC0.89□□□□□ -2.27
POLR1AO95602 RNU6-115P-201ENST00000364310 107 ntBASIC0.89□□□□□ -2.27
POLR1AO95602 RPL7L1P10-201ENST00000427790 463 ntBASIC0.89□□□□□ -2.27
POLR1AO95602 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.89□□□□□ -2.27
POLR1AO95602 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC0.89□□□□□ -2.27
POLR1AO95602 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC0.89□□□□□ -2.27
POLR1AO95602 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC0.89□□□□□ -2.27
POLR1AO95602 MIR4299-201ENST00000577899 72 ntBASIC0.89□□□□□ -2.27
POLR1AO95602 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC0.89□□□□□ -2.27
POLR1AO95602 XIAPP1-201ENST00000603162 600 ntBASIC0.89□□□□□ -2.27
POLR1AO95602 AC073111.2-201ENST00000605657 1075 ntBASIC0.89□□□□□ -2.27
POLR1AO95602 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
POLR1AO95602 RNU6-697P-201ENST00000363348 107 ntBASIC0.88□□□□□ -2.27
POLR1AO95602 MRPS36P2-201ENST00000512569 299 ntBASIC0.88□□□□□ -2.27
POLR1AO95602 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.88□□□□□ -2.27
POLR1AO95602 AP001330.4-201ENST00000604350 154 ntBASIC0.88□□□□□ -2.27
POLR1AO95602 AC103710.4-201ENST00000609301 899 ntBASIC0.88□□□□□ -2.27
POLR1AO95602 SDAD1P2-201ENST00000441308 2028 ntBASIC0.87□□□□□ -2.27
POLR1AO95602 MIR26B-201ENST00000362251 77 ntBASIC0.87□□□□□ -2.27
POLR1AO95602 RNU1-72P-201ENST00000362976 153 ntBASIC0.87□□□□□ -2.27
POLR1AO95602 RNU6-1187P-201ENST00000364771 110 ntBASIC0.87□□□□□ -2.27
POLR1AO95602 RPL30P6-201ENST00000475925 342 ntBASIC0.87□□□□□ -2.27
POLR1AO95602 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC0.87□□□□□ -2.27
POLR1AO95602 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.87□□□□□ -2.27
POLR1AO95602 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.87□□□□□ -2.27
POLR1AO95602 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.87□□□□□ -2.27
POLR1AO95602 RNA5SP212-201ENST00000391223 107 ntBASIC0.86□□□□□ -2.27
POLR1AO95602 U3.29-201ENST00000391296 212 ntBASIC0.86□□□□□ -2.27
POLR1AO95602 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
POLR1AO95602 AC096920.1-201ENST00000423991 241 ntBASIC0.86□□□□□ -2.27
POLR1AO95602 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
POLR1AO95602 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC0.86□□□□□ -2.27
POLR1AO95602 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.86□□□□□ -2.27
POLR1AO95602 AP002791.1-201ENST00000623291 381 ntBASIC0.86□□□□□ -2.27
POLR1AO95602 LINC02211-204ENST00000642024 1070 ntBASIC0.86□□□□□ -2.27
POLR1AO95602 RNU6-1249P-201ENST00000363237 111 ntBASIC0.86□□□□□ -2.27
POLR1AO95602 SNORA81-201ENST00000408493 178 ntBASIC0.86□□□□□ -2.27
POLR1AO95602 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.86□□□□□ -2.27
POLR1AO95602 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.86□□□□□ -2.27
POLR1AO95602 SNRPEP7-201ENST00000438350 220 ntBASIC0.86□□□□□ -2.27
POLR1AO95602 AP002371.1-201ENST00000463604 433 ntBASIC0.86□□□□□ -2.27
POLR1AO95602 OR52A4P-202ENST00000481634 799 ntBASIC0.86□□□□□ -2.27
POLR1AO95602 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC0.86□□□□□ -2.27
POLR1AO95602 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.86□□□□□ -2.27
POLR1AO95602 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
POLR1AO95602 SNORD26-201ENST00000384147 75 ntBASIC0.85□□□□□ -2.27
POLR1AO95602 RNA5SP63-201ENST00000391225 112 ntBASIC0.85□□□□□ -2.27
POLR1AO95602 OR9R1P-201ENST00000412200 877 ntBASIC0.85□□□□□ -2.27
POLR1AO95602 AC000111.3-201ENST00000433478 193 ntBASIC0.85□□□□□ -2.27
POLR1AO95602 AC087588.1-201ENST00000462203 316 ntBASIC0.85□□□□□ -2.27
POLR1AO95602 AC109927.2-201ENST00000506416 303 ntBASIC0.85□□□□□ -2.27
POLR1AO95602 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.85□□□□□ -2.27
POLR1AO95602 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.85□□□□□ -2.27
POLR1AO95602 AC004817.2-201ENST00000561794 651 ntBASIC0.85□□□□□ -2.27
POLR1AO95602 MIR548Y-201ENST00000582739 110 ntBASIC0.85□□□□□ -2.27
POLR1AO95602 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.85□□□□□ -2.27
POLR1AO95602 AC015849.6-201ENST00000605454 474 ntBASIC0.85□□□□□ -2.27
POLR1AO95602 AC010809.3-201ENST00000621310 641 ntBASIC0.85□□□□□ -2.27
POLR1AO95602 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC0.85□□□□□ -2.27
POLR1AO95602 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
POLR1AO95602 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.84□□□□□ -2.27
POLR1AO95602 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.84□□□□□ -2.27
POLR1AO95602 AC098614.2-201ENST00000426040 255 ntBASIC0.84□□□□□ -2.27
POLR1AO95602 AC079448.1-201ENST00000449377 373 ntBASIC0.84□□□□□ -2.27
POLR1AO95602 snoU109.1-201ENST00000459339 135 ntBASIC0.84□□□□□ -2.27
POLR1AO95602 AC008834.1-201ENST00000511612 175 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms