Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3□□□□□ -1.93
CACNA1FO60840 MTCO2P19-201ENST00000427513 598 ntBASIC3□□□□□ -1.93
CACNA1FO60840 RSU1P2-202ENST00000437884 485 ntBASIC3□□□□□ -1.93
CACNA1FO60840 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3□□□□□ -1.93
CACNA1FO60840 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3□□□□□ -1.93
CACNA1FO60840 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3□□□□□ -1.93
CACNA1FO60840 AL136380.1-201ENST00000447970 162 ntBASIC3□□□□□ -1.93
CACNA1FO60840 TRGVB-201ENST00000453257 471 ntBASIC3□□□□□ -1.93
CACNA1FO60840 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3□□□□□ -1.93
CACNA1FO60840 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3□□□□□ -1.93
CACNA1FO60840 SRI-210ENST00000490437 570 ntTSL 2 BASIC3□□□□□ -1.93
CACNA1FO60840 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3□□□□□ -1.93
CACNA1FO60840 TMEM251P1-201ENST00000503717 318 ntBASIC3□□□□□ -1.93
CACNA1FO60840 RNU6-430P-201ENST00000517078 107 ntBASIC3□□□□□ -1.93
CACNA1FO60840 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3□□□□□ -1.93
CACNA1FO60840 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3□□□□□ -1.93
CACNA1FO60840 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3□□□□□ -1.93
CACNA1FO60840 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3□□□□□ -1.93
CACNA1FO60840 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3□□□□□ -1.93
CACNA1FO60840 AC008945.2-201ENST00000606056 604 ntBASIC3□□□□□ -1.93
CACNA1FO60840 RNU6-156P-201ENST00000621869 107 ntBASIC3□□□□□ -1.93
CACNA1FO60840 AC004009.2-201ENST00000623016 728 ntBASIC3□□□□□ -1.93
CACNA1FO60840 AC092608.2-201ENST00000624427 218 ntBASIC3□□□□□ -1.93
CACNA1FO60840 MIR1321-201ENST00000637766 79 ntBASIC3□□□□□ -1.93
CACNA1FO60840 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3□□□□□ -1.93
CACNA1FO60840 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CACNA1FO60840 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
CACNA1FO60840 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.99□□□□□ -1.93
CACNA1FO60840 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
CACNA1FO60840 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.99□□□□□ -1.93
CACNA1FO60840 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CACNA1FO60840 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CACNA1FO60840 RNU6-223P-201ENST00000362830 107 ntBASIC2.99□□□□□ -1.93
CACNA1FO60840 Y_RNA.89-201ENST00000363031 102 ntBASIC2.99□□□□□ -1.93
CACNA1FO60840 Y_RNA.381-201ENST00000365666 102 ntBASIC2.99□□□□□ -1.93
CACNA1FO60840 SNORD21-201ENST00000383953 95 ntBASIC2.99□□□□□ -1.93
CACNA1FO60840 SNORA70B-201ENST00000384210 135 ntBASIC2.99□□□□□ -1.93
CACNA1FO60840 Y_RNA.481-201ENST00000384373 102 ntBASIC2.99□□□□□ -1.93
CACNA1FO60840 RNU2-8P-201ENST00000410727 190 ntBASIC2.99□□□□□ -1.93
CACNA1FO60840 AL135786.1-201ENST00000415892 214 ntBASIC2.99□□□□□ -1.93
CACNA1FO60840 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.99□□□□□ -1.93
CACNA1FO60840 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.99□□□□□ -1.93
CACNA1FO60840 AL445669.1-201ENST00000426743 755 ntBASIC2.99□□□□□ -1.93
CACNA1FO60840 AC006548.1-201ENST00000427470 102 ntBASIC2.99□□□□□ -1.93
CACNA1FO60840 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.99□□□□□ -1.93
CACNA1FO60840 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.99□□□□□ -1.93
CACNA1FO60840 HMGB1P15-201ENST00000453854 435 ntBASIC2.99□□□□□ -1.93
CACNA1FO60840 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CACNA1FO60840 RNU6-875P-201ENST00000516488 106 ntBASIC2.99□□□□□ -1.93
CACNA1FO60840 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.99□□□□□ -1.93
CACNA1FO60840 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.99□□□□□ -1.93
CACNA1FO60840 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.99□□□□□ -1.93
CACNA1FO60840 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.99□□□□□ -1.93
CACNA1FO60840 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.99□□□□□ -1.93
CACNA1FO60840 AL157687.1-201ENST00000554853 619 ntBASIC2.99□□□□□ -1.93
CACNA1FO60840 AC091544.4-201ENST00000555268 342 ntBASIC2.99□□□□□ -1.93
CACNA1FO60840 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.99□□□□□ -1.93
CACNA1FO60840 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.99□□□□□ -1.93
CACNA1FO60840 AL359999.1-201ENST00000604513 294 ntBASIC2.99□□□□□ -1.93
CACNA1FO60840 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.99□□□□□ -1.93
CACNA1FO60840 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.99□□□□□ -1.93
CACNA1FO60840 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.99□□□□□ -1.93
CACNA1FO60840 AP003400.5-201ENST00000624827 617 ntBASIC2.99□□□□□ -1.93
CACNA1FO60840 CR381572.1-201ENST00000625098 102 ntBASIC2.99□□□□□ -1.93
CACNA1FO60840 AC110994.2-201ENST00000635481 492 ntBASIC2.99□□□□□ -1.93
CACNA1FO60840 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.99□□□□□ -1.93
CACNA1FO60840 AC097714.1-201ENST00000511272 1647 ntBASIC2.99□□□□□ -1.93
CACNA1FO60840 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.99□□□□□ -1.93
CACNA1FO60840 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CACNA1FO60840 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.98□□□□□ -1.93
CACNA1FO60840 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.98□□□□□ -1.93
CACNA1FO60840 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.98□□□□□ -1.93
CACNA1FO60840 CBX3P1-201ENST00000325243 554 ntBASIC2.98□□□□□ -1.93
CACNA1FO60840 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
CACNA1FO60840 Y_RNA.61-201ENST00000362835 102 ntBASIC2.98□□□□□ -1.93
CACNA1FO60840 RNU4-73P-201ENST00000363164 141 ntBASIC2.98□□□□□ -1.93
CACNA1FO60840 AL591416.1-201ENST00000404015 867 ntBASIC2.98□□□□□ -1.93
CACNA1FO60840 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.98□□□□□ -1.93
CACNA1FO60840 RPL7P10-201ENST00000417407 739 ntBASIC2.98□□□□□ -1.93
CACNA1FO60840 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.98□□□□□ -1.93
CACNA1FO60840 AL365400.1-201ENST00000431854 640 ntBASIC2.98□□□□□ -1.93
CACNA1FO60840 USP9YP15-201ENST00000442391 422 ntBASIC2.98□□□□□ -1.93
CACNA1FO60840 RPL23AP20-201ENST00000447965 421 ntBASIC2.98□□□□□ -1.93
CACNA1FO60840 SNRPGP3-201ENST00000469405 227 ntBASIC2.98□□□□□ -1.93
CACNA1FO60840 AC092989.1-201ENST00000481235 277 ntBASIC2.98□□□□□ -1.93
CACNA1FO60840 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
CACNA1FO60840 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.98□□□□□ -1.93
CACNA1FO60840 AC025465.4-201ENST00000513422 638 ntBASIC2.98□□□□□ -1.93
CACNA1FO60840 RNU6-1003P-201ENST00000517099 105 ntBASIC2.98□□□□□ -1.93
CACNA1FO60840 AP003497.1-201ENST00000528472 562 ntBASIC2.98□□□□□ -1.93
CACNA1FO60840 AC104383.1-201ENST00000530297 370 ntBASIC2.98□□□□□ -1.93
CACNA1FO60840 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.98□□□□□ -1.93
CACNA1FO60840 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.98□□□□□ -1.93
CACNA1FO60840 AL512360.1-201ENST00000555346 234 ntBASIC2.98□□□□□ -1.93
CACNA1FO60840 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.98□□□□□ -1.93
CACNA1FO60840 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CACNA1FO60840 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
CACNA1FO60840 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
CACNA1FO60840 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CACNA1FO60840 Y_RNA.11-201ENST00000362375 109 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms