Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.8□□□□□ -1.8
PRAMEF4O60810 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PRAMEF4O60810 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.79□□□□□ -1.8
PRAMEF4O60810 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PRAMEF4O60810 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
PRAMEF4O60810 RNU6-600P-201ENST00000362524 99 ntBASIC3.79□□□□□ -1.8
PRAMEF4O60810 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.79□□□□□ -1.8
PRAMEF4O60810 Y_RNA.112-201ENST00000363250 102 ntBASIC3.79□□□□□ -1.8
PRAMEF4O60810 Y_RNA.202-201ENST00000364083 110 ntBASIC3.79□□□□□ -1.8
PRAMEF4O60810 RNU6-384P-201ENST00000364900 104 ntBASIC3.79□□□□□ -1.8
PRAMEF4O60810 Y_RNA.324-201ENST00000365165 102 ntBASIC3.79□□□□□ -1.8
PRAMEF4O60810 SNORA62-201ENST00000365493 153 ntBASIC3.79□□□□□ -1.8
PRAMEF4O60810 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
PRAMEF4O60810 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PRAMEF4O60810 Y_RNA.473-201ENST00000384333 102 ntBASIC3.79□□□□□ -1.8
PRAMEF4O60810 SNORA70C-201ENST00000384538 135 ntBASIC3.79□□□□□ -1.8
PRAMEF4O60810 Y_RNA.594-201ENST00000410373 140 ntBASIC3.79□□□□□ -1.8
PRAMEF4O60810 AL592148.1-201ENST00000413568 445 ntBASIC3.79□□□□□ -1.8
PRAMEF4O60810 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.79□□□□□ -1.8
PRAMEF4O60810 C4BPAP2-201ENST00000428434 478 ntBASIC3.79□□□□□ -1.8
PRAMEF4O60810 AL645568.3-201ENST00000433683 316 ntBASIC3.79□□□□□ -1.8
PRAMEF4O60810 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.79□□□□□ -1.8
PRAMEF4O60810 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.79□□□□□ -1.8
PRAMEF4O60810 NOTCH2P1-201ENST00000443481 624 ntBASIC3.79□□□□□ -1.8
PRAMEF4O60810 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.79□□□□□ -1.8
PRAMEF4O60810 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.79□□□□□ -1.8
PRAMEF4O60810 SNORD5.1-201ENST00000458800 75 ntBASIC3.79□□□□□ -1.8
PRAMEF4O60810 KC877373.1-201ENST00000479066 408 ntBASIC3.79□□□□□ -1.8
PRAMEF4O60810 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.79□□□□□ -1.8
PRAMEF4O60810 AC026726.1-201ENST00000512859 601 ntBASIC3.79□□□□□ -1.8
PRAMEF4O60810 MIR892C-201ENST00000516410 77 ntBASIC3.79□□□□□ -1.8
PRAMEF4O60810 Y_RNA.708-201ENST00000516950 96 ntBASIC3.79□□□□□ -1.8
PRAMEF4O60810 RNA5SP290-201ENST00000517133 127 ntBASIC3.79□□□□□ -1.8
PRAMEF4O60810 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.79□□□□□ -1.8
PRAMEF4O60810 AC009902.1-201ENST00000519351 183 ntBASIC3.79□□□□□ -1.8
PRAMEF4O60810 AC006504.6-201ENST00000590142 199 ntBASIC3.79□□□□□ -1.8
PRAMEF4O60810 NUTF2P8-201ENST00000604593 363 ntBASIC3.79□□□□□ -1.8
PRAMEF4O60810 AC106900.2-201ENST00000604994 317 ntBASIC3.79□□□□□ -1.8
PRAMEF4O60810 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PRAMEF4O60810 AL713922.2-201ENST00000619384 716 ntBASIC3.79□□□□□ -1.8
PRAMEF4O60810 RNA5SP196-201ENST00000625967 102 ntBASIC3.79□□□□□ -1.8
PRAMEF4O60810 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.79□□□□□ -1.8
PRAMEF4O60810 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PRAMEF4O60810 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PRAMEF4O60810 AC008568.2-201ENST00000623862 2313 ntBASIC3.79□□□□□ -1.8
PRAMEF4O60810 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.79□□□□□ -1.8
PRAMEF4O60810 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PRAMEF4O60810 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
PRAMEF4O60810 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PRAMEF4O60810 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.79□□□□□ -1.8
PRAMEF4O60810 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.78□□□□□ -1.8
PRAMEF4O60810 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
PRAMEF4O60810 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PRAMEF4O60810 SNORA31-201ENST00000362607 130 ntBASIC3.78□□□□□ -1.8
PRAMEF4O60810 RNA5SP189-201ENST00000364920 115 ntBASIC3.78□□□□□ -1.8
PRAMEF4O60810 SNORA22B-201ENST00000383876 138 ntBASIC3.78□□□□□ -1.8
PRAMEF4O60810 RNU6-1040P-201ENST00000383974 107 ntBASIC3.78□□□□□ -1.8
PRAMEF4O60810 Y_RNA.404-201ENST00000383978 102 ntBASIC3.78□□□□□ -1.8
PRAMEF4O60810 RNU6-890P-201ENST00000384121 107 ntBASIC3.78□□□□□ -1.8
PRAMEF4O60810 RNU6-1160P-201ENST00000384546 104 ntBASIC3.78□□□□□ -1.8
PRAMEF4O60810 RNU6-306P-201ENST00000384617 107 ntBASIC3.78□□□□□ -1.8
PRAMEF4O60810 SNORD73A-201ENST00000386062 65 ntBASIC3.78□□□□□ -1.8
PRAMEF4O60810 RNU6-308P-201ENST00000390957 107 ntBASIC3.78□□□□□ -1.8
PRAMEF4O60810 RNU6-1050P-201ENST00000410388 107 ntBASIC3.78□□□□□ -1.8
PRAMEF4O60810 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.78□□□□□ -1.8
PRAMEF4O60810 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.78□□□□□ -1.8
PRAMEF4O60810 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.78□□□□□ -1.8
PRAMEF4O60810 AL691449.1-201ENST00000426570 421 ntBASIC3.78□□□□□ -1.8
PRAMEF4O60810 AC087650.1-201ENST00000431445 468 ntBASIC3.78□□□□□ -1.8
PRAMEF4O60810 PIGFP3-201ENST00000441918 722 ntBASIC3.78□□□□□ -1.8
PRAMEF4O60810 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.78□□□□□ -1.8
PRAMEF4O60810 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.78□□□□□ -1.8
PRAMEF4O60810 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.78□□□□□ -1.8
PRAMEF4O60810 RNU7-187P-201ENST00000458985 68 ntBASIC3.78□□□□□ -1.8
PRAMEF4O60810 AC103987.1-201ENST00000473394 348 ntBASIC3.78□□□□□ -1.8
PRAMEF4O60810 AC097473.1-201ENST00000508142 408 ntBASIC3.78□□□□□ -1.8
PRAMEF4O60810 SMURF2P1-201ENST00000514992 481 ntBASIC3.78□□□□□ -1.8
PRAMEF4O60810 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.78□□□□□ -1.8
PRAMEF4O60810 TRAV28-201ENST00000557548 323 ntBASIC3.78□□□□□ -1.8
PRAMEF4O60810 AC123912.5-201ENST00000605470 343 ntBASIC3.78□□□□□ -1.8
PRAMEF4O60810 AL355802.3-201ENST00000607571 545 ntBASIC3.78□□□□□ -1.8
PRAMEF4O60810 AC019193.3-201ENST00000609144 554 ntBASIC3.78□□□□□ -1.8
PRAMEF4O60810 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.78□□□□□ -1.8
PRAMEF4O60810 MIR4727-201ENST00000622232 55 ntBASIC3.78□□□□□ -1.8
PRAMEF4O60810 AC112484.5-201ENST00000624189 228 ntBASIC3.78□□□□□ -1.8
PRAMEF4O60810 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PRAMEF4O60810 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PRAMEF4O60810 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
PRAMEF4O60810 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PRAMEF4O60810 IPO8P1-201ENST00000455509 3109 ntBASIC3.78□□□□□ -1.8
PRAMEF4O60810 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.78□□□□□ -1.8
PRAMEF4O60810 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.78□□□□□ -1.8
PRAMEF4O60810 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.78□□□□□ -1.81
PRAMEF4O60810 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PRAMEF4O60810 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PRAMEF4O60810 RNA5SP443-201ENST00000363083 132 ntBASIC3.77□□□□□ -1.81
PRAMEF4O60810 Y_RNA.422-201ENST00000384054 114 ntBASIC3.77□□□□□ -1.81
PRAMEF4O60810 RPS26P8-201ENST00000393490 348 ntBASIC3.77□□□□□ -1.81
PRAMEF4O60810 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.77□□□□□ -1.81
PRAMEF4O60810 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms