Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
CHD1O14646 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CHD1O14646 RNA5SP258-201ENST00000362750 119 ntBASIC1.23□□□□□ -2.21
CHD1O14646 MIR493-201ENST00000385254 89 ntBASIC1.23□□□□□ -2.21
CHD1O14646 Z80107.1-201ENST00000436830 412 ntBASIC1.23□□□□□ -2.21
CHD1O14646 TPTE2P6-202ENST00000445572 1007 ntBASIC1.23□□□□□ -2.21
CHD1O14646 OR6C72P-201ENST00000451403 892 ntBASIC1.23□□□□□ -2.21
CHD1O14646 AL359385.1-201ENST00000456509 365 ntBASIC1.23□□□□□ -2.21
CHD1O14646 RNU6-420P-201ENST00000458780 107 ntBASIC1.23□□□□□ -2.21
CHD1O14646 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.23□□□□□ -2.21
CHD1O14646 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.23□□□□□ -2.21
CHD1O14646 MED28P6-201ENST00000558776 231 ntBASIC1.23□□□□□ -2.21
CHD1O14646 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.23□□□□□ -2.21
CHD1O14646 MIR4299-201ENST00000577899 72 ntBASIC1.23□□□□□ -2.21
CHD1O14646 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
CHD1O14646 RNU6-185P-201ENST00000384421 107 ntBASIC1.23□□□□□ -2.21
CHD1O14646 RPS3AP24-201ENST00000407896 734 ntBASIC1.23□□□□□ -2.21
CHD1O14646 AC099548.1-201ENST00000421443 426 ntBASIC1.23□□□□□ -2.21
CHD1O14646 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CHD1O14646 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.23□□□□□ -2.21
CHD1O14646 AC111000.5-201ENST00000506559 1178 ntBASIC1.23□□□□□ -2.21
CHD1O14646 AK3P2-201ENST00000507976 429 ntBASIC1.23□□□□□ -2.21
CHD1O14646 AC112518.2-201ENST00000508565 425 ntBASIC1.23□□□□□ -2.21
CHD1O14646 AC004812.1-201ENST00000540773 146 ntBASIC1.23□□□□□ -2.21
CHD1O14646 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.23□□□□□ -2.21
CHD1O14646 AC084033.1-201ENST00000550830 633 ntBASIC1.23□□□□□ -2.21
CHD1O14646 MIR3609-201ENST00000582661 80 ntBASIC1.23□□□□□ -2.21
CHD1O14646 AC103710.4-201ENST00000609301 899 ntBASIC1.23□□□□□ -2.21
CHD1O14646 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CHD1O14646 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.23□□□□□ -2.21
CHD1O14646 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CHD1O14646 RNA5SP127-201ENST00000411051 133 ntBASIC1.22□□□□□ -2.21
CHD1O14646 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.22□□□□□ -2.21
CHD1O14646 AC023512.1-201ENST00000444513 499 ntBASIC1.22□□□□□ -2.21
CHD1O14646 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CHD1O14646 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.22□□□□□ -2.21
CHD1O14646 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC1.22□□□□□ -2.21
CHD1O14646 AC008562.1-201ENST00000521763 330 ntBASIC1.22□□□□□ -2.21
CHD1O14646 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.22□□□□□ -2.21
CHD1O14646 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.22□□□□□ -2.21
CHD1O14646 AC079791.1-201ENST00000605356 973 ntBASIC1.22□□□□□ -2.21
CHD1O14646 AL592148.2-201ENST00000612210 372 ntBASIC1.22□□□□□ -2.21
CHD1O14646 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.22□□□□□ -2.21
CHD1O14646 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
CHD1O14646 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.21□□□□□ -2.22
CHD1O14646 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.21□□□□□ -2.22
CHD1O14646 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.21□□□□□ -2.22
CHD1O14646 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.21□□□□□ -2.22
CHD1O14646 RNU6-496P-201ENST00000516145 99 ntBASIC1.21□□□□□ -2.22
CHD1O14646 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.21□□□□□ -2.22
CHD1O14646 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.21□□□□□ -2.22
CHD1O14646 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.21□□□□□ -2.22
CHD1O14646 AP002826.1-201ENST00000608835 315 ntBASIC1.21□□□□□ -2.22
CHD1O14646 AC243829.3-201ENST00000622177 108 ntBASIC1.21□□□□□ -2.22
CHD1O14646 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
CHD1O14646 RNA5SP56-201ENST00000410277 118 ntBASIC1.2□□□□□ -2.22
CHD1O14646 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC1.2□□□□□ -2.22
CHD1O14646 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.2□□□□□ -2.22
CHD1O14646 RPS20P10-201ENST00000451209 253 ntBASIC1.2□□□□□ -2.22
CHD1O14646 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CHD1O14646 TPT1P8-201ENST00000510120 555 ntBASIC1.2□□□□□ -2.22
CHD1O14646 AC016065.2-201ENST00000514530 444 ntBASIC1.2□□□□□ -2.22
CHD1O14646 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.2□□□□□ -2.22
CHD1O14646 AC073544.1-201ENST00000600110 1595 ntBASIC1.2□□□□□ -2.22
CHD1O14646 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.2□□□□□ -2.22
CHD1O14646 CBX3P3-201ENST00000508108 532 ntBASIC1.2□□□□□ -2.22
CHD1O14646 TPTE2P4-201ENST00000258589 1605 ntBASIC1.19□□□□□ -2.22
CHD1O14646 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.19□□□□□ -2.22
CHD1O14646 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.19□□□□□ -2.22
CHD1O14646 SNORA70.16-201ENST00000516390 95 ntBASIC1.19□□□□□ -2.22
CHD1O14646 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.19□□□□□ -2.22
CHD1O14646 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC1.19□□□□□ -2.22
CHD1O14646 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.19□□□□□ -2.22
CHD1O14646 AL773524.1-201ENST00000614065 229 ntBASIC1.19□□□□□ -2.22
CHD1O14646 AC123912.3-201ENST00000600907 1367 ntBASIC1.19□□□□□ -2.22
CHD1O14646 AC016716.1-201ENST00000265882 708 ntBASIC1.18□□□□□ -2.22
CHD1O14646 NACAP2-201ENST00000318548 624 ntBASIC1.18□□□□□ -2.22
CHD1O14646 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC1.18□□□□□ -2.22
CHD1O14646 RNU6-942P-201ENST00000363002 107 ntBASIC1.18□□□□□ -2.22
CHD1O14646 RNU6-1074P-201ENST00000383995 104 ntBASIC1.18□□□□□ -2.22
CHD1O14646 RNA5SP511-201ENST00000410487 115 ntBASIC1.18□□□□□ -2.22
CHD1O14646 AC098934.3-201ENST00000430450 190 ntBASIC1.18□□□□□ -2.22
CHD1O14646 C1DP3-201ENST00000455013 423 ntBASIC1.18□□□□□ -2.22
CHD1O14646 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.18□□□□□ -2.22
CHD1O14646 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.18□□□□□ -2.22
CHD1O14646 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.18□□□□□ -2.22
CHD1O14646 AL355877.2-201ENST00000603670 358 ntBASIC1.18□□□□□ -2.22
CHD1O14646 AC138473.1-201ENST00000605717 526 ntBASIC1.18□□□□□ -2.22
CHD1O14646 AC097372.4-201ENST00000625025 466 ntBASIC1.18□□□□□ -2.22
CHD1O14646 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.18□□□□□ -2.22
CHD1O14646 RNA5SP347-201ENST00000362445 119 ntBASIC1.18□□□□□ -2.22
CHD1O14646 AC244453.4-201ENST00000419150 388 ntBASIC1.18□□□□□ -2.22
CHD1O14646 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.18□□□□□ -2.22
CHD1O14646 AC246680.2-201ENST00000422106 389 ntBASIC1.18□□□□□ -2.22
CHD1O14646 MICF-203ENST00000432679 129 ntBASIC1.18□□□□□ -2.22
CHD1O14646 AC104629.2-201ENST00000468627 598 ntBASIC1.18□□□□□ -2.22
CHD1O14646 RNU6-1282P-201ENST00000516735 96 ntBASIC1.18□□□□□ -2.22
CHD1O14646 SCARNA3-201ENST00000517097 143 ntBASIC1.18□□□□□ -2.22
CHD1O14646 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.18□□□□□ -2.22
CHD1O14646 AL049870.4-201ENST00000555741 486 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms