Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.25□□□□□ -1.89
HMX3A6NHT5 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.25□□□□□ -1.89
HMX3A6NHT5 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
HMX3A6NHT5 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.25□□□□□ -1.89
HMX3A6NHT5 AC006199.1-201ENST00000548728 219 ntBASIC3.25□□□□□ -1.89
HMX3A6NHT5 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.25□□□□□ -1.89
HMX3A6NHT5 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.25□□□□□ -1.89
HMX3A6NHT5 AL137849.1-201ENST00000604767 169 ntBASIC3.25□□□□□ -1.89
HMX3A6NHT5 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HMX3A6NHT5 RNU6-89P-201ENST00000606519 100 ntBASIC3.25□□□□□ -1.89
HMX3A6NHT5 AL136295.6-201ENST00000610486 658 ntBASIC3.25□□□□□ -1.89
HMX3A6NHT5 AC110079.1-202ENST00000635213 138 ntBASIC3.25□□□□□ -1.89
HMX3A6NHT5 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
HMX3A6NHT5 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
HMX3A6NHT5 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.25□□□□□ -1.89
HMX3A6NHT5 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.25□□□□□ -1.89
HMX3A6NHT5 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.24□□□□□ -1.89
HMX3A6NHT5 RNU1-105P-201ENST00000363470 161 ntBASIC3.24□□□□□ -1.89
HMX3A6NHT5 Y_RNA.167-201ENST00000363735 109 ntBASIC3.24□□□□□ -1.89
HMX3A6NHT5 RNU6-522P-201ENST00000364497 107 ntBASIC3.24□□□□□ -1.89
HMX3A6NHT5 Y_RNA.378-201ENST00000365652 113 ntBASIC3.24□□□□□ -1.89
HMX3A6NHT5 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
HMX3A6NHT5 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
HMX3A6NHT5 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HMX3A6NHT5 RNU6-373P-201ENST00000411247 98 ntBASIC3.24□□□□□ -1.89
HMX3A6NHT5 POLHP1-201ENST00000411806 470 ntBASIC3.24□□□□□ -1.89
HMX3A6NHT5 AC126124.2-201ENST00000413542 321 ntBASIC3.24□□□□□ -1.89
HMX3A6NHT5 AP000907.1-201ENST00000428428 510 ntBASIC3.24□□□□□ -1.89
HMX3A6NHT5 AL139415.2-201ENST00000431968 163 ntBASIC3.24□□□□□ -1.89
HMX3A6NHT5 AL121601.2-201ENST00000438019 707 ntBASIC3.24□□□□□ -1.89
HMX3A6NHT5 RNU6-1208P-201ENST00000459588 107 ntBASIC3.24□□□□□ -1.89
HMX3A6NHT5 HMGN2P26-201ENST00000463169 339 ntBASIC3.24□□□□□ -1.89
HMX3A6NHT5 UQCRHP4-201ENST00000471686 272 ntBASIC3.24□□□□□ -1.89
HMX3A6NHT5 AC105137.1-201ENST00000484355 562 ntBASIC3.24□□□□□ -1.89
HMX3A6NHT5 Y_RNA.654-201ENST00000497848 106 ntBASIC3.24□□□□□ -1.89
HMX3A6NHT5 AC079140.5-201ENST00000507882 310 ntBASIC3.24□□□□□ -1.89
HMX3A6NHT5 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.24□□□□□ -1.89
HMX3A6NHT5 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.24□□□□□ -1.89
HMX3A6NHT5 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.24□□□□□ -1.89
HMX3A6NHT5 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.24□□□□□ -1.89
HMX3A6NHT5 AC025281.1-201ENST00000567026 265 ntBASIC3.24□□□□□ -1.89
HMX3A6NHT5 AC010653.1-201ENST00000571108 881 ntBASIC3.24□□□□□ -1.89
HMX3A6NHT5 MIR5684-201ENST00000585074 65 ntBASIC3.24□□□□□ -1.89
HMX3A6NHT5 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.24□□□□□ -1.89
HMX3A6NHT5 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.24□□□□□ -1.89
HMX3A6NHT5 AC092807.2-201ENST00000609367 243 ntBASIC3.24□□□□□ -1.89
HMX3A6NHT5 AL020991.1-201ENST00000612314 373 ntBASIC3.24□□□□□ -1.89
HMX3A6NHT5 AC103705.1-201ENST00000619013 241 ntBASIC3.24□□□□□ -1.89
HMX3A6NHT5 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.24□□□□□ -1.89
HMX3A6NHT5 MIR3653-201ENST00000625572 110 ntBASIC3.24□□□□□ -1.89
HMX3A6NHT5 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.24□□□□□ -1.89
HMX3A6NHT5 MIR3199-2-201ENST00000636243 86 ntBASIC3.24□□□□□ -1.89
HMX3A6NHT5 MIR3662-201ENST00000637030 95 ntBASIC3.24□□□□□ -1.89
HMX3A6NHT5 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
HMX3A6NHT5 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HMX3A6NHT5 AC121333.1-201ENST00000567488 2709 ntBASIC3.23□□□□□ -1.89
HMX3A6NHT5 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.23□□□□□ -1.89
HMX3A6NHT5 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
HMX3A6NHT5 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.23□□□□□ -1.89
HMX3A6NHT5 AC093908.1-201ENST00000623125 8092 ntBASIC3.23□□□□□ -1.89
HMX3A6NHT5 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
HMX3A6NHT5 RNU1-32P-201ENST00000363937 159 ntBASIC3.23□□□□□ -1.89
HMX3A6NHT5 RNA5SP139-201ENST00000364340 117 ntBASIC3.23□□□□□ -1.89
HMX3A6NHT5 U3.12-201ENST00000364498 214 ntBASIC3.23□□□□□ -1.89
HMX3A6NHT5 RNA5SP515-201ENST00000364570 118 ntBASIC3.23□□□□□ -1.89
HMX3A6NHT5 RNU6-1027P-201ENST00000383998 107 ntBASIC3.23□□□□□ -1.89
HMX3A6NHT5 MIR34A-201ENST00000385130 110 ntBASIC3.23□□□□□ -1.89
HMX3A6NHT5 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.23□□□□□ -1.89
HMX3A6NHT5 RNU2-49P-201ENST00000410666 184 ntBASIC3.23□□□□□ -1.89
HMX3A6NHT5 RPLP0P7-201ENST00000416050 667 ntBASIC3.23□□□□□ -1.89
HMX3A6NHT5 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.23□□□□□ -1.89
HMX3A6NHT5 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.23□□□□□ -1.89
HMX3A6NHT5 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.23□□□□□ -1.89
HMX3A6NHT5 MTND1P2-201ENST00000430604 821 ntBASIC3.23□□□□□ -1.89
HMX3A6NHT5 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.23□□□□□ -1.89
HMX3A6NHT5 MRPS10P2-201ENST00000431226 381 ntBASIC3.23□□□□□ -1.89
HMX3A6NHT5 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.23□□□□□ -1.89
HMX3A6NHT5 NFU1P2-201ENST00000448700 469 ntBASIC3.23□□□□□ -1.89
HMX3A6NHT5 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.23□□□□□ -1.89
HMX3A6NHT5 BTF3P15-201ENST00000455606 336 ntBASIC3.23□□□□□ -1.89
HMX3A6NHT5 RNA5SP246-201ENST00000458909 119 ntBASIC3.23□□□□□ -1.89
HMX3A6NHT5 AC091167.1-201ENST00000492017 396 ntBASIC3.23□□□□□ -1.89
HMX3A6NHT5 RPS27P26-201ENST00000494583 239 ntBASIC3.23□□□□□ -1.89
HMX3A6NHT5 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.23□□□□□ -1.89
HMX3A6NHT5 RNU6-189P-201ENST00000516120 101 ntBASIC3.23□□□□□ -1.89
HMX3A6NHT5 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.23□□□□□ -1.89
HMX3A6NHT5 SNORA25.17-201ENST00000517184 124 ntBASIC3.23□□□□□ -1.89
HMX3A6NHT5 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.23□□□□□ -1.89
HMX3A6NHT5 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
HMX3A6NHT5 MIR3138-201ENST00000585238 82 ntBASIC3.23□□□□□ -1.89
HMX3A6NHT5 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.23□□□□□ -1.89
HMX3A6NHT5 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.23□□□□□ -1.89
HMX3A6NHT5 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.23□□□□□ -1.89
HMX3A6NHT5 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.22□□□□□ -1.89
HMX3A6NHT5 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.22□□□□□ -1.89
HMX3A6NHT5 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HMX3A6NHT5 MIR148B-201ENST00000362252 99 ntBASIC3.22□□□□□ -1.89
HMX3A6NHT5 RNA5SP383-201ENST00000362934 120 ntBASIC3.22□□□□□ -1.89
HMX3A6NHT5 RNU6-898P-201ENST00000365627 104 ntBASIC3.22□□□□□ -1.89
HMX3A6NHT5 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms