Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.74□□□□□ -2.29
TRAV1-2A0A0B4J238 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC0.74□□□□□ -2.29
TRAV1-2A0A0B4J238 AP000238.1-201ENST00000608759 426 ntBASIC0.74□□□□□ -2.29
TRAV1-2A0A0B4J238 AC009974.1-201ENST00000608881 455 ntBASIC0.74□□□□□ -2.29
TRAV1-2A0A0B4J238 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC0.74□□□□□ -2.29
TRAV1-2A0A0B4J238 AC119674.1-220ENST00000641502 1048 ntBASIC0.74□□□□□ -2.29
TRAV1-2A0A0B4J238 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
TRAV1-2A0A0B4J238 SEC63P2-201ENST00000503863 1939 ntBASIC0.74□□□□□ -2.29
TRAV1-2A0A0B4J238 GDI2P1-201ENST00000429312 1336 ntBASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 SNORA25B-201ENST00000365507 128 ntBASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 RNU6-741P-201ENST00000383889 107 ntBASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 MIR532-201ENST00000385025 91 ntBASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 AC008379.1-201ENST00000463655 464 ntBASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 RPL39P28-201ENST00000465655 155 ntBASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 AC018868.1-201ENST00000491307 315 ntBASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 AC112198.4-201ENST00000515450 351 ntBASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 AC034114.1-201ENST00000520293 285 ntBASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 DUXAP5-201ENST00000529668 529 ntBASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 OR5B19P-201ENST00000531766 928 ntBASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 AL356432.3-201ENST00000568952 465 ntBASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 AC005261.5-201ENST00000596280 355 ntBASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 VN1R88P-201ENST00000596787 292 ntBASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 AC013244.2-201ENST00000603396 103 ntBASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 AL671309.1-201ENST00000603750 544 ntBASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 AL670379.6-201ENST00000603753 252 ntBASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 AL670379.11-201ENST00000604059 253 ntBASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 AL670379.10-201ENST00000604330 253 ntBASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 FAM71BP1-201ENST00000604431 523 ntBASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 AC008162.1-201ENST00000604718 254 ntBASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 AL670379.1-201ENST00000604752 252 ntBASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 AL670379.2-201ENST00000604983 252 ntBASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 AL670379.5-201ENST00000605253 252 ntBASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 AL670379.4-201ENST00000605279 254 ntBASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 AL670379.12-201ENST00000605291 253 ntBASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 AL670379.8-201ENST00000605353 252 ntBASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 AL670379.9-201ENST00000605428 253 ntBASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 AL670379.7-201ENST00000605823 252 ntBASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 AL118508.4-201ENST00000624142 1176 ntBASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 AL359854.1-201ENST00000614203 1594 ntBASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
TRAV1-2A0A0B4J238 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
TRAV1-2A0A0B4J238 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
TRAV1-2A0A0B4J238 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV1-2A0A0B4J238 RPS27AP10-201ENST00000496103 208 ntBASIC0.72□□□□□ -2.29
TRAV1-2A0A0B4J238 RNA5SP112-201ENST00000515937 99 ntBASIC0.72□□□□□ -2.29
TRAV1-2A0A0B4J238 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.72□□□□□ -2.29
TRAV1-2A0A0B4J238 SNORA44.1-201ENST00000517031 108 ntBASIC0.72□□□□□ -2.29
TRAV1-2A0A0B4J238 AC093510.2-201ENST00000562820 896 ntBASIC0.72□□□□□ -2.29
TRAV1-2A0A0B4J238 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.72□□□□□ -2.29
TRAV1-2A0A0B4J238 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV1-2A0A0B4J238 TUG1_1.1-201ENST00000610654 145 ntBASIC0.72□□□□□ -2.29
TRAV1-2A0A0B4J238 uc_338.14-201ENST00000613162 166 ntBASIC0.72□□□□□ -2.29
TRAV1-2A0A0B4J238 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.72□□□□□ -2.29
TRAV1-2A0A0B4J238 AL359314.1-201ENST00000616913 261 ntBASIC0.72□□□□□ -2.29
TRAV1-2A0A0B4J238 MTND1P37-201ENST00000636562 264 ntBASIC0.72□□□□□ -2.29
TRAV1-2A0A0B4J238 MTCO1P23-201ENST00000415223 1526 ntBASIC0.72□□□□□ -2.29
TRAV1-2A0A0B4J238 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
TRAV1-2A0A0B4J238 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.71□□□□□ -2.3
TRAV1-2A0A0B4J238 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
TRAV1-2A0A0B4J238 RNU4-51P-201ENST00000364206 140 ntBASIC0.71□□□□□ -2.3
TRAV1-2A0A0B4J238 MIR515-2-201ENST00000384883 83 ntBASIC0.71□□□□□ -2.3
TRAV1-2A0A0B4J238 MIR515-1-201ENST00000384884 83 ntBASIC0.71□□□□□ -2.3
TRAV1-2A0A0B4J238 MIR146A-201ENST00000385201 99 ntBASIC0.71□□□□□ -2.3
TRAV1-2A0A0B4J238 RNA5SP213-201ENST00000391031 106 ntBASIC0.71□□□□□ -2.3
TRAV1-2A0A0B4J238 AL121978.1-201ENST00000402778 359 ntBASIC0.71□□□□□ -2.3
TRAV1-2A0A0B4J238 AL139098.1-201ENST00000407291 389 ntBASIC0.71□□□□□ -2.3
TRAV1-2A0A0B4J238 BTF3P8-201ENST00000414577 526 ntBASIC0.71□□□□□ -2.3
TRAV1-2A0A0B4J238 AP1B1P2-201ENST00000416196 106 ntBASIC0.71□□□□□ -2.3
TRAV1-2A0A0B4J238 AL160275.3-201ENST00000423876 471 ntBASIC0.71□□□□□ -2.3
TRAV1-2A0A0B4J238 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC0.71□□□□□ -2.3
TRAV1-2A0A0B4J238 AC092634.2-201ENST00000428146 1010 ntBASIC0.71□□□□□ -2.3
TRAV1-2A0A0B4J238 DYNLT3P2-201ENST00000442517 295 ntBASIC0.71□□□□□ -2.3
TRAV1-2A0A0B4J238 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.71□□□□□ -2.3
TRAV1-2A0A0B4J238 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.71□□□□□ -2.3
TRAV1-2A0A0B4J238 RNU6-889P-201ENST00000517189 103 ntBASIC0.71□□□□□ -2.3
TRAV1-2A0A0B4J238 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.71□□□□□ -2.3
TRAV1-2A0A0B4J238 AP003066.2-201ENST00000529375 555 ntBASIC0.71□□□□□ -2.3
TRAV1-2A0A0B4J238 NDUFA5P6-201ENST00000542110 379 ntBASIC0.71□□□□□ -2.3
TRAV1-2A0A0B4J238 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
TRAV1-2A0A0B4J238 AL731537.2-201ENST00000561565 951 ntBASIC0.71□□□□□ -2.3
TRAV1-2A0A0B4J238 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC0.71□□□□□ -2.3
TRAV1-2A0A0B4J238 AL020997.3-201ENST00000602843 359 ntBASIC0.71□□□□□ -2.3
TRAV1-2A0A0B4J238 MTCYBP22-201ENST00000603788 447 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms