Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 MTATP6P4-201ENST00000427725 675 ntBASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 RPL21P112-201ENST00000434403 463 ntBASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 AL121601.2-201ENST00000438019 707 ntBASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 AC006028.1-201ENST00000438379 402 ntBASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 AC073415.1-201ENST00000449240 153 ntBASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 RPS20P20-201ENST00000460498 340 ntBASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 AC114786.4-201ENST00000508771 728 ntBASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 AC046134.1-201ENST00000514454 666 ntBASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 CENPUP1-201ENST00000526649 1202 ntBASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 BNIP3P30-201ENST00000601184 574 ntBASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 Y_RNA.804-201ENST00000615262 101 ntBASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 SNORD39.4-201ENST00000620099 78 ntBASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 C2orf27A-204ENST00000623058 969 ntBASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
RAI2Q9Y5P3 RIOK3P1-201ENST00000418778 1528 ntBASIC3.34□□□□□ -1.88
RAI2Q9Y5P3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
RAI2Q9Y5P3 AL353746.1-201ENST00000566293 6881 ntBASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 RNU6-1287P-201ENST00000362914 107 ntBASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 Y_RNA.86-201ENST00000363020 111 ntBASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 AP002088.1-201ENST00000382740 395 ntBASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 RNU6-1060P-201ENST00000384664 107 ntBASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 RNU2-29P-201ENST00000410423 189 ntBASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 RNU6-387P-201ENST00000411331 105 ntBASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 OR6C66P-201ENST00000414917 930 ntBASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 AC009161.1-201ENST00000417306 376 ntBASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 MTND4P25-201ENST00000441039 533 ntBASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 AC108860.1-201ENST00000484521 383 ntBASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 EIF4EP3-201ENST00000498782 656 ntBASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 YWHAEP4-201ENST00000505390 198 ntBASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 AC108078.2-201ENST00000510750 236 ntBASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 RNU4-29P-201ENST00000515943 174 ntBASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 SNORA70.14-201ENST00000516205 110 ntBASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 AC109635.4-202ENST00000531666 412 ntBASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 MIR5004-201ENST00000579078 107 ntBASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 MIR4775-201ENST00000581168 75 ntBASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 AC010928.3-201ENST00000587712 541 ntBASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 AC010525.2-201ENST00000590920 195 ntBASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 BNIP3P9-201ENST00000603714 553 ntBASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 RMST_3.1-201ENST00000611651 109 ntBASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 API5P2-201ENST00000397055 1498 ntBASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 AL137003.2-201ENST00000606924 2538 ntBASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 OR4G1P-203ENST00000641984 1631 ntBASIC3.33□□□□□ -1.88
RAI2Q9Y5P3 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.32□□□□□ -1.88
RAI2Q9Y5P3 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.32□□□□□ -1.88
RAI2Q9Y5P3 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RAI2Q9Y5P3 CBX3P1-201ENST00000325243 554 ntBASIC3.32□□□□□ -1.88
RAI2Q9Y5P3 Y_RNA.70-201ENST00000362886 110 ntBASIC3.32□□□□□ -1.88
RAI2Q9Y5P3 RNU6-946P-201ENST00000383878 107 ntBASIC3.32□□□□□ -1.88
RAI2Q9Y5P3 SNORA24.1-201ENST00000384401 135 ntBASIC3.32□□□□□ -1.88
RAI2Q9Y5P3 AL606923.1-201ENST00000406616 190 ntBASIC3.32□□□□□ -1.88
RAI2Q9Y5P3 AC114491.1-201ENST00000416095 246 ntBASIC3.32□□□□□ -1.88
RAI2Q9Y5P3 AL159169.1-201ENST00000421119 127 ntBASIC3.32□□□□□ -1.88
RAI2Q9Y5P3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.32□□□□□ -1.88
RAI2Q9Y5P3 CALM2P2-201ENST00000428512 440 ntBASIC3.32□□□□□ -1.88
RAI2Q9Y5P3 HMGB1P27-201ENST00000431429 603 ntBASIC3.32□□□□□ -1.88
RAI2Q9Y5P3 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.32□□□□□ -1.88
RAI2Q9Y5P3 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.32□□□□□ -1.88
RAI2Q9Y5P3 NEFMP1-201ENST00000443423 1006 ntBASIC3.32□□□□□ -1.88
RAI2Q9Y5P3 Z75741.1-201ENST00000446793 314 ntBASIC3.32□□□□□ -1.88
RAI2Q9Y5P3 RPL23AP31-201ENST00000456160 467 ntBASIC3.32□□□□□ -1.88
RAI2Q9Y5P3 snoU13.4-201ENST00000458916 104 ntBASIC3.32□□□□□ -1.88
RAI2Q9Y5P3 RPL38P4-201ENST00000502376 214 ntBASIC3.32□□□□□ -1.88
RAI2Q9Y5P3 AC104806.1-201ENST00000508720 308 ntBASIC3.32□□□□□ -1.88
RAI2Q9Y5P3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.32□□□□□ -1.88
RAI2Q9Y5P3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.32□□□□□ -1.88
RAI2Q9Y5P3 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.32□□□□□ -1.88
RAI2Q9Y5P3 RANP3-201ENST00000530970 276 ntBASIC3.32□□□□□ -1.88
RAI2Q9Y5P3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.32□□□□□ -1.88
RAI2Q9Y5P3 AC011602.1-201ENST00000546484 331 ntBASIC3.32□□□□□ -1.88
RAI2Q9Y5P3 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms