Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.65□□□□□ -1.82
PCDHGB6Q9Y5F9 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 RNA5SP124-201ENST00000362739 110 ntBASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 RNU4-66P-201ENST00000365199 138 ntBASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 RNU4-20P-201ENST00000365601 151 ntBASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 MIR578-201ENST00000384828 96 ntBASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 SNORD70.1-201ENST00000391007 85 ntBASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 AL714022.1-201ENST00000439897 151 ntBASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 RNU7-170P-201ENST00000459303 61 ntBASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 HMGN2P13-201ENST00000476476 274 ntBASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 Y_RNA.654-201ENST00000497848 106 ntBASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 RNU2-69P-201ENST00000516061 100 ntBASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 SNORD59.2-201ENST00000516873 68 ntBASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 YPEL5P3-201ENST00000547227 352 ntBASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 NACAP3-201ENST00000552100 481 ntBASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 AC078814.3-201ENST00000553036 491 ntBASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 AL163153.1-201ENST00000554223 283 ntBASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 AL391261.3-201ENST00000557194 520 ntBASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 AL645944.1-201ENST00000603857 493 ntBASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 RNU6-89P-201ENST00000606519 100 ntBASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 U2.17-201ENST00000611454 95 ntBASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 AC096577.2-201ENST00000611455 153 ntBASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 AP003400.5-201ENST00000624827 617 ntBASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 U6.98-201ENST00000637157 84 ntBASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 MAPK10-322ENST00000641485 4530 ntBASIC3.65□□□□□ -1.83
PCDHGB6Q9Y5F9 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 AC006504.1-201ENST00000562493 3666 ntBASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 AC121333.1-201ENST00000567488 2709 ntBASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 SNORA73.2-201ENST00000364946 201 ntBASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 RNA5SP97-201ENST00000365006 84 ntBASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 Y_RNA.480-201ENST00000384364 102 ntBASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 SNORA16.2-201ENST00000390991 127 ntBASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 SNORA3.3-201ENST00000408712 125 ntBASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 SNORA57.3-201ENST00000411095 141 ntBASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 RNU6-607P-201ENST00000411283 108 ntBASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 RPL21P90-201ENST00000415692 466 ntBASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 HMGB1P37-201ENST00000439613 609 ntBASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 AL078601.1-201ENST00000444542 271 ntBASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 U3.44-201ENST00000458938 192 ntBASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 RNU7-167P-201ENST00000459160 62 ntBASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 SNORA59A-201ENST00000459326 152 ntBASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 RNU7-23P-201ENST00000459465 62 ntBASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 AP002884.2-201ENST00000471647 395 ntBASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 RPL21P99-201ENST00000480369 423 ntBASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 AC139453.3-201ENST00000493276 369 ntBASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 AC009901.1-201ENST00000506703 541 ntBASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 CCDC34P1-201ENST00000507441 517 ntBASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 RNU1-103P-201ENST00000516502 125 ntBASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 RNU6-711P-201ENST00000517255 106 ntBASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 AC025755.1-201ENST00000521306 278 ntBASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 AF235103.2-201ENST00000525753 346 ntBASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 OR11H5P-201ENST00000554039 926 ntBASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 AL121772.2-201ENST00000614331 297 ntBASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 AC006504.8-201ENST00000621046 635 ntBASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHGB6Q9Y5F9 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGB6Q9Y5F9 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGB6Q9Y5F9 UBE3AP2-201ENST00000429033 2259 ntBASIC3.63□□□□□ -1.83
PCDHGB6Q9Y5F9 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
PCDHGB6Q9Y5F9 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHGB6Q9Y5F9 RNU6-884P-201ENST00000363889 107 ntBASIC3.63□□□□□ -1.83
PCDHGB6Q9Y5F9 U3.12-201ENST00000364498 214 ntBASIC3.63□□□□□ -1.83
PCDHGB6Q9Y5F9 SNORA14A-201ENST00000364773 135 ntBASIC3.63□□□□□ -1.83
PCDHGB6Q9Y5F9 SNORA75B-201ENST00000384053 137 ntBASIC3.63□□□□□ -1.83
PCDHGB6Q9Y5F9 RNU6-198P-201ENST00000384258 104 ntBASIC3.63□□□□□ -1.83
PCDHGB6Q9Y5F9 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.63□□□□□ -1.83
PCDHGB6Q9Y5F9 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.63□□□□□ -1.83
PCDHGB6Q9Y5F9 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDHGB6Q9Y5F9 SKA2P1-201ENST00000425592 390 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms