Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 MTCYBP23-201ENST00000558717 1102 ntBASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 AC009712.1-201ENST00000564938 316 ntBASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 MTND3P13-201ENST00000574391 343 ntBASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 AL158163.2-201ENST00000619110 700 ntBASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 AC126544.2-201ENST00000625174 749 ntBASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CHTOPQ9Y3Y2 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC1.8□□□□□ -2.12
CHTOPQ9Y3Y2 MIRLET7G-201ENST00000362280 84 ntBASIC1.8□□□□□ -2.12
CHTOPQ9Y3Y2 SNORA63.1-201ENST00000362493 131 ntBASIC1.8□□□□□ -2.12
CHTOPQ9Y3Y2 RNU6-777P-201ENST00000364265 104 ntBASIC1.8□□□□□ -2.12
CHTOPQ9Y3Y2 RNU1-51P-201ENST00000365345 176 ntBASIC1.8□□□□□ -2.12
CHTOPQ9Y3Y2 MIR23B-201ENST00000384832 97 ntBASIC1.8□□□□□ -2.12
CHTOPQ9Y3Y2 MIR301A-201ENST00000385261 86 ntBASIC1.8□□□□□ -2.12
CHTOPQ9Y3Y2 RNA5SP171-201ENST00000391071 115 ntBASIC1.8□□□□□ -2.12
CHTOPQ9Y3Y2 USP9YP20-201ENST00000419224 558 ntBASIC1.8□□□□□ -2.12
CHTOPQ9Y3Y2 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC1.8□□□□□ -2.12
CHTOPQ9Y3Y2 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC1.8□□□□□ -2.12
CHTOPQ9Y3Y2 AL592045.1-201ENST00000429867 352 ntBASIC1.8□□□□□ -2.12
CHTOPQ9Y3Y2 USP9YP24-201ENST00000434374 697 ntBASIC1.8□□□□□ -2.12
CHTOPQ9Y3Y2 AC011816.1-201ENST00000441346 546 ntBASIC1.8□□□□□ -2.12
CHTOPQ9Y3Y2 EEF1E1P1-201ENST00000446998 430 ntBASIC1.8□□□□□ -2.12
CHTOPQ9Y3Y2 RNU6-953P-201ENST00000459154 107 ntBASIC1.8□□□□□ -2.12
CHTOPQ9Y3Y2 AC008834.1-201ENST00000511612 175 ntBASIC1.8□□□□□ -2.12
CHTOPQ9Y3Y2 SNORA44.1-201ENST00000517031 108 ntBASIC1.8□□□□□ -2.12
CHTOPQ9Y3Y2 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.8□□□□□ -2.12
CHTOPQ9Y3Y2 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.8□□□□□ -2.12
CHTOPQ9Y3Y2 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.8□□□□□ -2.12
CHTOPQ9Y3Y2 AC073410.2-201ENST00000603240 332 ntBASIC1.8□□□□□ -2.12
CHTOPQ9Y3Y2 NDUFA8P1-201ENST00000605525 367 ntBASIC1.8□□□□□ -2.12
CHTOPQ9Y3Y2 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC1.8□□□□□ -2.12
CHTOPQ9Y3Y2 AC012314.7-201ENST00000619693 93 ntBASIC1.8□□□□□ -2.12
CHTOPQ9Y3Y2 U1.36-201ENST00000620684 176 ntBASIC1.8□□□□□ -2.12
CHTOPQ9Y3Y2 U6.105-201ENST00000637379 88 ntBASIC1.8□□□□□ -2.12
CHTOPQ9Y3Y2 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.79□□□□□ -2.12
CHTOPQ9Y3Y2 RNU6-188P-201ENST00000364207 107 ntBASIC1.79□□□□□ -2.12
CHTOPQ9Y3Y2 RNU6-621P-201ENST00000364752 109 ntBASIC1.79□□□□□ -2.12
CHTOPQ9Y3Y2 Z98749.2-208ENST00000381646 500 ntBASIC1.79□□□□□ -2.12
CHTOPQ9Y3Y2 RNU6-817P-201ENST00000391083 104 ntBASIC1.79□□□□□ -2.12
CHTOPQ9Y3Y2 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.79□□□□□ -2.12
CHTOPQ9Y3Y2 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.79□□□□□ -2.12
CHTOPQ9Y3Y2 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.79□□□□□ -2.12
CHTOPQ9Y3Y2 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.79□□□□□ -2.12
CHTOPQ9Y3Y2 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.79□□□□□ -2.12
CHTOPQ9Y3Y2 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.79□□□□□ -2.12
CHTOPQ9Y3Y2 MTCO2P17-201ENST00000424336 677 ntBASIC1.79□□□□□ -2.12
CHTOPQ9Y3Y2 AL159987.2-201ENST00000432754 307 ntBASIC1.79□□□□□ -2.12
CHTOPQ9Y3Y2 HSPE1P21-201ENST00000438283 308 ntBASIC1.79□□□□□ -2.12
CHTOPQ9Y3Y2 AL136380.1-201ENST00000447970 162 ntBASIC1.79□□□□□ -2.12
CHTOPQ9Y3Y2 RPL23AP7-203ENST00000449021 469 ntBASIC1.79□□□□□ -2.12
CHTOPQ9Y3Y2 ZNF886P-201ENST00000450781 723 ntBASIC1.79□□□□□ -2.12
CHTOPQ9Y3Y2 PRSS3P4-201ENST00000453323 162 ntBASIC1.79□□□□□ -2.12
CHTOPQ9Y3Y2 AC108059.3-201ENST00000456388 214 ntBASIC1.79□□□□□ -2.12
CHTOPQ9Y3Y2 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.79□□□□□ -2.12
CHTOPQ9Y3Y2 RPL39P36-201ENST00000490784 156 ntBASIC1.79□□□□□ -2.12
CHTOPQ9Y3Y2 AC006499.5-201ENST00000505037 514 ntBASIC1.79□□□□□ -2.12
CHTOPQ9Y3Y2 RN7SKP132-201ENST00000516001 208 ntBASIC1.79□□□□□ -2.12
CHTOPQ9Y3Y2 RN7SKP57-201ENST00000517248 293 ntBASIC1.79□□□□□ -2.12
CHTOPQ9Y3Y2 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.79□□□□□ -2.12
CHTOPQ9Y3Y2 PSMA2P1-201ENST00000526365 646 ntBASIC1.79□□□□□ -2.12
CHTOPQ9Y3Y2 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.79□□□□□ -2.12
CHTOPQ9Y3Y2 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.79□□□□□ -2.12
CHTOPQ9Y3Y2 AC018638.7-201ENST00000605836 1114 ntBASIC1.79□□□□□ -2.12
CHTOPQ9Y3Y2 AC024060.1-201ENST00000607052 494 ntBASIC1.79□□□□□ -2.12
CHTOPQ9Y3Y2 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.79□□□□□ -2.12
CHTOPQ9Y3Y2 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.79□□□□□ -2.12
CHTOPQ9Y3Y2 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
CHTOPQ9Y3Y2 MTND5P33-201ENST00000571250 1450 ntBASIC1.78□□□□□ -2.12
CHTOPQ9Y3Y2 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CHTOPQ9Y3Y2 RNU4-42P-201ENST00000364738 142 ntBASIC1.78□□□□□ -2.12
CHTOPQ9Y3Y2 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
CHTOPQ9Y3Y2 RNU6-1032P-201ENST00000384100 107 ntBASIC1.78□□□□□ -2.12
CHTOPQ9Y3Y2 MIR183-201ENST00000384958 110 ntBASIC1.78□□□□□ -2.12
CHTOPQ9Y3Y2 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
CHTOPQ9Y3Y2 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CHTOPQ9Y3Y2 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CHTOPQ9Y3Y2 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.78□□□□□ -2.12
CHTOPQ9Y3Y2 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.78□□□□□ -2.12
CHTOPQ9Y3Y2 EIF4EP2-201ENST00000422816 654 ntBASIC1.78□□□□□ -2.12
CHTOPQ9Y3Y2 RAB6C-AS1-202ENST00000433431 123 ntBASIC1.78□□□□□ -2.12
CHTOPQ9Y3Y2 AC098826.1-201ENST00000433943 471 ntBASIC1.78□□□□□ -2.12
CHTOPQ9Y3Y2 NEFMP1-201ENST00000443423 1006 ntBASIC1.78□□□□□ -2.12
CHTOPQ9Y3Y2 AL078601.1-201ENST00000444542 271 ntBASIC1.78□□□□□ -2.12
CHTOPQ9Y3Y2 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC1.78□□□□□ -2.12
CHTOPQ9Y3Y2 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC1.78□□□□□ -2.12
CHTOPQ9Y3Y2 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.78□□□□□ -2.12
CHTOPQ9Y3Y2 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.78□□□□□ -2.12
CHTOPQ9Y3Y2 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CHTOPQ9Y3Y2 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC1.78□□□□□ -2.12
CHTOPQ9Y3Y2 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CHTOPQ9Y3Y2 FAM92A1P1-201ENST00000528023 890 ntBASIC1.78□□□□□ -2.12
CHTOPQ9Y3Y2 DEFB108A-201ENST00000530110 222 ntBASIC1.78□□□□□ -2.12
CHTOPQ9Y3Y2 MIR3198-2-201ENST00000577868 80 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms