Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.09□□□□□ -1.76
SF3B6Q9Y3B4 LINC01355-201ENST00000566551 5444 ntBASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 MIR448-201ENST00000362131 111 ntBASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 SNORA58B-201ENST00000364259 136 ntBASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 RNU4-50P-201ENST00000364361 141 ntBASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 RNU6-336P-201ENST00000364891 107 ntBASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 Y_RNA.447-201ENST00000384184 113 ntBASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 RNU6-708P-201ENST00000384217 107 ntBASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 Y_RNA.526-201ENST00000384572 110 ntBASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 MIR550A3-201ENST00000390735 95 ntBASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 U3.30-201ENST00000391308 210 ntBASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 MTCO3P29-201ENST00000432119 779 ntBASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 MARK2P15-201ENST00000432204 2186 ntBASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 AL451050.1-201ENST00000450126 415 ntBASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 AC079168.2-201ENST00000453977 416 ntBASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 RN7SL826P-201ENST00000479724 288 ntBASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 AC093270.2-201ENST00000486157 792 ntBASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 AC107222.1-201ENST00000510899 637 ntBASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 AC234771.5-201ENST00000600161 514 ntBASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 AC011373.1-201ENST00000607270 237 ntBASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 AL136164.3-201ENST00000624429 3978 ntBASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 NEAT1-202ENST00000501122 22743 ntBASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 MAPK10-253ENST00000641010 4072 ntBASIC4.08□□□□□ -1.76
SF3B6Q9Y3B4 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 RNU6-78P-201ENST00000362897 107 ntBASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 Y_RNA.276-201ENST00000364732 109 ntBASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 RNU6-72P-201ENST00000384285 79 ntBASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 Y_RNA.483-201ENST00000384380 101 ntBASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 RNU1-44P-201ENST00000384453 163 ntBASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 RNU6-140P-201ENST00000384566 108 ntBASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 RNU1-82P-201ENST00000390851 165 ntBASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 Y_RNA.592-201ENST00000410274 109 ntBASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 Z98949.2-201ENST00000440996 144 ntBASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 AURKAPS2-201ENST00000454983 333 ntBASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 AC091868.1-201ENST00000508746 304 ntBASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 RNU6-1143P-201ENST00000516125 104 ntBASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 SNORA40.15-201ENST00000516884 107 ntBASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 HSPE1P20-201ENST00000538133 289 ntBASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 AC008033.2-201ENST00000542626 177 ntBASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 AC007458.1-201ENST00000542812 373 ntBASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 MIR3934-201ENST00000579806 107 ntBASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 RPS29P30-201ENST00000600975 111 ntBASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 AL390123.1-201ENST00000603216 237 ntBASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 AL138721.1-201ENST00000616756 179 ntBASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 AC103858.2-201ENST00000621471 543 ntBASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 AC091905.2-201ENST00000623143 306 ntBASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 U4.7-201ENST00000638126 106 ntBASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.07□□□□□ -1.76
SF3B6Q9Y3B4 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SF3B6Q9Y3B4 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.06□□□□□ -1.76
SF3B6Q9Y3B4 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SF3B6Q9Y3B4 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SF3B6Q9Y3B4 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SF3B6Q9Y3B4 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SF3B6Q9Y3B4 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SF3B6Q9Y3B4 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SF3B6Q9Y3B4 FTLP6-201ENST00000355274 422 ntBASIC4.06□□□□□ -1.76
SF3B6Q9Y3B4 RN7SKP95-201ENST00000362860 303 ntBASIC4.06□□□□□ -1.76
SF3B6Q9Y3B4 Y_RNA.123-201ENST00000363338 102 ntBASIC4.06□□□□□ -1.76
SF3B6Q9Y3B4 Y_RNA.489-201ENST00000384410 101 ntBASIC4.06□□□□□ -1.76
SF3B6Q9Y3B4 MIR607-201ENST00000385241 96 ntBASIC4.06□□□□□ -1.76
SF3B6Q9Y3B4 MIR513A2-201ENST00000385249 127 ntBASIC4.06□□□□□ -1.76
SF3B6Q9Y3B4 RNU6-1197P-201ENST00000391183 107 ntBASIC4.06□□□□□ -1.76
SF3B6Q9Y3B4 MIR1302-6-201ENST00000408466 90 ntBASIC4.06□□□□□ -1.76
SF3B6Q9Y3B4 AC114755.2-201ENST00000413520 361 ntBASIC4.06□□□□□ -1.76
SF3B6Q9Y3B4 MTCO3P19-201ENST00000415864 321 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms