Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NOD1Q9Y239 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.19□□□□□ -1.58
NOD1Q9Y239 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NOD1Q9Y239 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NOD1Q9Y239 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NOD1Q9Y239 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NOD1Q9Y239 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
NOD1Q9Y239 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NOD1Q9Y239 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.19□□□□□ -1.58
NOD1Q9Y239 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NOD1Q9Y239 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NOD1Q9Y239 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NOD1Q9Y239 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
NOD1Q9Y239 OR14L1P-202ENST00000641545 3009 ntBASIC5.18□□□□□ -1.58
NOD1Q9Y239 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.18□□□□□ -1.58
NOD1Q9Y239 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.18□□□□□ -1.58
NOD1Q9Y239 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NOD1Q9Y239 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
NOD1Q9Y239 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
NOD1Q9Y239 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.18□□□□□ -1.58
NOD1Q9Y239 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NOD1Q9Y239 Y_RNA.29-201ENST00000362570 113 ntBASIC5.18□□□□□ -1.58
NOD1Q9Y239 RNU6-335P-201ENST00000364563 113 ntBASIC5.18□□□□□ -1.58
NOD1Q9Y239 RN7SKP16-201ENST00000410180 299 ntBASIC5.18□□□□□ -1.58
NOD1Q9Y239 RPL27AP8-201ENST00000424277 446 ntBASIC5.18□□□□□ -1.58
NOD1Q9Y239 AC011998.1-201ENST00000433403 117 ntBASIC5.18□□□□□ -1.58
NOD1Q9Y239 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.18□□□□□ -1.58
NOD1Q9Y239 RPL21P126-201ENST00000470049 478 ntBASIC5.18□□□□□ -1.58
NOD1Q9Y239 RNU7-175P-201ENST00000515915 61 ntBASIC5.18□□□□□ -1.58
NOD1Q9Y239 RN7SKP21-201ENST00000516503 220 ntBASIC5.18□□□□□ -1.58
NOD1Q9Y239 AC136932.1-201ENST00000574771 208 ntBASIC5.18□□□□□ -1.58
NOD1Q9Y239 MIR4300-201ENST00000581016 96 ntBASIC5.18□□□□□ -1.58
NOD1Q9Y239 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.18□□□□□ -1.58
NOD1Q9Y239 AP002826.1-201ENST00000608835 315 ntBASIC5.18□□□□□ -1.58
NOD1Q9Y239 FTX_2.1-201ENST00000618816 94 ntBASIC5.18□□□□□ -1.58
NOD1Q9Y239 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.18□□□□□ -1.58
NOD1Q9Y239 AL450472.1-202ENST00000637286 180 ntBASIC5.18□□□□□ -1.58
NOD1Q9Y239 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC5.18□□□□□ -1.58
NOD1Q9Y239 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.18□□□□□ -1.58
NOD1Q9Y239 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NOD1Q9Y239 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NOD1Q9Y239 HSPA8P1-201ENST00000425843 1833 ntBASIC5.18□□□□□ -1.58
NOD1Q9Y239 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
NOD1Q9Y239 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NOD1Q9Y239 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.17□□□□□ -1.58
NOD1Q9Y239 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
NOD1Q9Y239 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.17□□□□□ -1.58
NOD1Q9Y239 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NOD1Q9Y239 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
NOD1Q9Y239 MIR133A2-201ENST00000347538 102 ntBASIC5.17□□□□□ -1.58
NOD1Q9Y239 RNU5E-7P-201ENST00000365290 117 ntBASIC5.17□□□□□ -1.58
NOD1Q9Y239 AP000275.1-201ENST00000411943 390 ntBASIC5.17□□□□□ -1.58
NOD1Q9Y239 VTI1BP4-201ENST00000427516 527 ntBASIC5.17□□□□□ -1.58
NOD1Q9Y239 PIGFP3-201ENST00000441918 722 ntBASIC5.17□□□□□ -1.58
NOD1Q9Y239 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.17□□□□□ -1.58
NOD1Q9Y239 AC092798.1-201ENST00000458542 409 ntBASIC5.17□□□□□ -1.58
NOD1Q9Y239 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.17□□□□□ -1.58
NOD1Q9Y239 NIP7P2-201ENST00000485801 544 ntBASIC5.17□□□□□ -1.58
NOD1Q9Y239 RPL36AP41-201ENST00000493820 306 ntBASIC5.17□□□□□ -1.58
NOD1Q9Y239 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.17□□□□□ -1.58
NOD1Q9Y239 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC5.17□□□□□ -1.58
NOD1Q9Y239 RNU6-572P-201ENST00000516724 80 ntBASIC5.17□□□□□ -1.58
NOD1Q9Y239 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.17□□□□□ -1.58
NOD1Q9Y239 MIR1254-2-201ENST00000579553 63 ntBASIC5.17□□□□□ -1.58
NOD1Q9Y239 RPL23AP78-201ENST00000599928 470 ntBASIC5.17□□□□□ -1.58
NOD1Q9Y239 SNRPGP15-201ENST00000600149 222 ntBASIC5.17□□□□□ -1.58
NOD1Q9Y239 ARF4P1-201ENST00000605447 541 ntBASIC5.17□□□□□ -1.58
NOD1Q9Y239 AC090132.2-201ENST00000615881 347 ntBASIC5.17□□□□□ -1.58
NOD1Q9Y239 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.17□□□□□ -1.58
NOD1Q9Y239 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NOD1Q9Y239 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NOD1Q9Y239 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
NOD1Q9Y239 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NOD1Q9Y239 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
NOD1Q9Y239 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
NOD1Q9Y239 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
NOD1Q9Y239 ADAM24P-201ENST00000398655 2101 ntBASIC5.17□□□□□ -1.58
NOD1Q9Y239 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.17□□□□□ -1.58
NOD1Q9Y239 LINC02555-201ENST00000563933 1951 ntBASIC5.16□□□□□ -1.58
NOD1Q9Y239 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
NOD1Q9Y239 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NOD1Q9Y239 AL356489.2-201ENST00000566968 3528 ntBASIC5.16□□□□□ -1.58
NOD1Q9Y239 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NOD1Q9Y239 MFSD8-242ENST00000641690 4199 ntBASIC5.16□□□□□ -1.58
NOD1Q9Y239 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
NOD1Q9Y239 SNORD81.1-201ENST00000363064 77 ntBASIC5.16□□□□□ -1.58
NOD1Q9Y239 Y_RNA.143-201ENST00000363520 106 ntBASIC5.16□□□□□ -1.58
NOD1Q9Y239 Y_RNA.274-201ENST00000364714 101 ntBASIC5.16□□□□□ -1.58
NOD1Q9Y239 Y_RNA.297-201ENST00000364950 91 ntBASIC5.16□□□□□ -1.58
NOD1Q9Y239 RNY3P4-201ENST00000384428 101 ntBASIC5.16□□□□□ -1.58
NOD1Q9Y239 MRPL35P1-201ENST00000404272 572 ntBASIC5.16□□□□□ -1.58
NOD1Q9Y239 MIR1290-201ENST00000408735 78 ntBASIC5.16□□□□□ -1.58
NOD1Q9Y239 RN7SKP27-201ENST00000410684 333 ntBASIC5.16□□□□□ -1.58
NOD1Q9Y239 TOMM22P1-201ENST00000418578 312 ntBASIC5.16□□□□□ -1.58
NOD1Q9Y239 TMEM167AP1-201ENST00000423409 219 ntBASIC5.16□□□□□ -1.58
NOD1Q9Y239 AL591043.1-201ENST00000432461 424 ntBASIC5.16□□□□□ -1.58
NOD1Q9Y239 AL078601.1-201ENST00000444542 271 ntBASIC5.16□□□□□ -1.58
NOD1Q9Y239 ISCUP1-201ENST00000454451 448 ntBASIC5.16□□□□□ -1.58
NOD1Q9Y239 ANP32BP2-201ENST00000454525 545 ntBASIC5.16□□□□□ -1.58
NOD1Q9Y239 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms