Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM35Q9UPQ4 RNU5A-1-201ENST00000362698 116 ntBASIC6.57□□□□□ -1.36
TRIM35Q9UPQ4 SNORA66-201ENST00000384792 133 ntBASIC6.57□□□□□ -1.36
TRIM35Q9UPQ4 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM35Q9UPQ4 RNU2-43P-201ENST00000410306 190 ntBASIC6.57□□□□□ -1.36
TRIM35Q9UPQ4 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM35Q9UPQ4 AC016712.1-201ENST00000431088 378 ntBASIC6.57□□□□□ -1.36
TRIM35Q9UPQ4 EEF1A1P1-201ENST00000447052 739 ntBASIC6.57□□□□□ -1.36
TRIM35Q9UPQ4 AL691482.1-201ENST00000453255 87 ntBASIC6.57□□□□□ -1.36
TRIM35Q9UPQ4 IGLV2-34-201ENST00000490007 283 ntBASIC6.57□□□□□ -1.36
TRIM35Q9UPQ4 RN7SL244P-201ENST00000493405 297 ntBASIC6.57□□□□□ -1.36
TRIM35Q9UPQ4 RN7SL591P-201ENST00000496150 292 ntBASIC6.57□□□□□ -1.36
TRIM35Q9UPQ4 GMPSP1-201ENST00000514075 579 ntBASIC6.57□□□□□ -1.36
TRIM35Q9UPQ4 IGKV2D-36-201ENST00000518643 226 ntBASIC6.57□□□□□ -1.36
TRIM35Q9UPQ4 TBCA-207ENST00000520039 157 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM35Q9UPQ4 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM35Q9UPQ4 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM35Q9UPQ4 THAP12P5-201ENST00000405864 2275 ntBASIC6.57□□□□□ -1.36
TRIM35Q9UPQ4 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM35Q9UPQ4 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM35Q9UPQ4 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM35Q9UPQ4 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM35Q9UPQ4 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM35Q9UPQ4 AC018529.3-201ENST00000624212 2254 ntBASIC6.56□□□□□ -1.36
TRIM35Q9UPQ4 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM35Q9UPQ4 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
TRIM35Q9UPQ4 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM35Q9UPQ4 Y_RNA.572-201ENST00000384757 98 ntBASIC6.56□□□□□ -1.36
TRIM35Q9UPQ4 MIR888-201ENST00000401186 77 ntBASIC6.56□□□□□ -1.36
TRIM35Q9UPQ4 AC017078.1-201ENST00000416146 368 ntBASIC6.56□□□□□ -1.36
TRIM35Q9UPQ4 RPL21P66-201ENST00000426566 466 ntBASIC6.56□□□□□ -1.36
TRIM35Q9UPQ4 RPL12P3-201ENST00000440080 396 ntBASIC6.56□□□□□ -1.36
TRIM35Q9UPQ4 RPS4XP13-201ENST00000483219 789 ntBASIC6.56□□□□□ -1.36
TRIM35Q9UPQ4 Y_RNA.692-201ENST00000516627 105 ntBASIC6.56□□□□□ -1.36
TRIM35Q9UPQ4 AC005255.1-201ENST00000593748 216 ntBASIC6.56□□□□□ -1.36
TRIM35Q9UPQ4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC6.56□□□□□ -1.36
TRIM35Q9UPQ4 AC004467.1-201ENST00000615678 330 ntBASIC6.56□□□□□ -1.36
TRIM35Q9UPQ4 AL391261.4-201ENST00000616012 481 ntBASIC6.56□□□□□ -1.36
TRIM35Q9UPQ4 AP001318.4-201ENST00000616637 121 ntBASIC6.56□□□□□ -1.36
TRIM35Q9UPQ4 RNF123-214ENST00000629802 207 ntTSL 5 BASIC6.56□□□□□ -1.36
TRIM35Q9UPQ4 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM35Q9UPQ4 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.56□□□□□ -1.36
TRIM35Q9UPQ4 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM35Q9UPQ4 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM35Q9UPQ4 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC6.55□□□□□ -1.36
TRIM35Q9UPQ4 AL450345.1-202ENST00000605741 3881 ntBASIC6.55□□□□□ -1.36
TRIM35Q9UPQ4 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM35Q9UPQ4 AP002512.4-202ENST00000641599 4530 ntBASIC6.55□□□□□ -1.36
TRIM35Q9UPQ4 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM35Q9UPQ4 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
TRIM35Q9UPQ4 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC6.55□□□□□ -1.36
TRIM35Q9UPQ4 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM35Q9UPQ4 CENPCP1-201ENST00000533085 2578 ntBASIC6.55□□□□□ -1.36
TRIM35Q9UPQ4 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM35Q9UPQ4 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
TRIM35Q9UPQ4 Y_RNA.293-201ENST00000364908 93 ntBASIC6.55□□□□□ -1.36
TRIM35Q9UPQ4 U8.10-201ENST00000384260 133 ntBASIC6.55□□□□□ -1.36
TRIM35Q9UPQ4 SSXP9-201ENST00000417503 292 ntBASIC6.55□□□□□ -1.36
TRIM35Q9UPQ4 OR2AM1P-201ENST00000422137 422 ntBASIC6.55□□□□□ -1.36
TRIM35Q9UPQ4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC6.55□□□□□ -1.36
TRIM35Q9UPQ4 RNU6-625P-201ENST00000459412 107 ntBASIC6.55□□□□□ -1.36
TRIM35Q9UPQ4 RNU6-58P-201ENST00000517143 103 ntBASIC6.55□□□□□ -1.36
TRIM35Q9UPQ4 ZNF192P1-203ENST00000565888 810 ntBASIC6.55□□□□□ -1.36
TRIM35Q9UPQ4 MIR4646-201ENST00000580775 63 ntBASIC6.55□□□□□ -1.36
TRIM35Q9UPQ4 AL445567.2-201ENST00000618935 498 ntBASIC6.55□□□□□ -1.36
TRIM35Q9UPQ4 AC091932.3-201ENST00000624223 323 ntBASIC6.55□□□□□ -1.36
TRIM35Q9UPQ4 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.55□□□□□ -1.36
TRIM35Q9UPQ4 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM35Q9UPQ4 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM35Q9UPQ4 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC6.55□□□□□ -1.36
TRIM35Q9UPQ4 AC068700.1-201ENST00000565862 3754 ntBASIC6.55□□□□□ -1.36
TRIM35Q9UPQ4 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM35Q9UPQ4 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
TRIM35Q9UPQ4 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM35Q9UPQ4 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC6.54□□□□□ -1.36
TRIM35Q9UPQ4 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
TRIM35Q9UPQ4 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM35Q9UPQ4 Y_RNA.24-201ENST00000362508 103 ntBASIC6.54□□□□□ -1.36
TRIM35Q9UPQ4 RNU6-1155P-201ENST00000363554 107 ntBASIC6.54□□□□□ -1.36
TRIM35Q9UPQ4 SNORD58C-201ENST00000365223 64 ntBASIC6.54□□□□□ -1.36
TRIM35Q9UPQ4 SNORA70.10-201ENST00000384515 134 ntBASIC6.54□□□□□ -1.36
TRIM35Q9UPQ4 ENSAP1-201ENST00000392855 326 ntBASIC6.54□□□□□ -1.36
TRIM35Q9UPQ4 RNU6-554P-201ENST00000410466 106 ntBASIC6.54□□□□□ -1.36
TRIM35Q9UPQ4 RN7SKP125-201ENST00000410481 302 ntBASIC6.54□□□□□ -1.36
TRIM35Q9UPQ4 RPS3AP1-201ENST00000413190 320 ntBASIC6.54□□□□□ -1.36
TRIM35Q9UPQ4 EDDM3CP-201ENST00000415977 425 ntBASIC6.54□□□□□ -1.36
TRIM35Q9UPQ4 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.54□□□□□ -1.36
TRIM35Q9UPQ4 AC245047.8-201ENST00000456455 284 ntBASIC6.54□□□□□ -1.36
TRIM35Q9UPQ4 AC092798.1-201ENST00000458542 409 ntBASIC6.54□□□□□ -1.36
TRIM35Q9UPQ4 AC140172.1-201ENST00000502928 141 ntBASIC6.54□□□□□ -1.36
TRIM35Q9UPQ4 RN7SKP12-201ENST00000516275 143 ntBASIC6.54□□□□□ -1.36
TRIM35Q9UPQ4 AC090142.3-201ENST00000519012 385 ntBASIC6.54□□□□□ -1.36
TRIM35Q9UPQ4 AC091905.4-201ENST00000623432 202 ntBASIC6.54□□□□□ -1.36
TRIM35Q9UPQ4 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM35Q9UPQ4 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.54□□□□□ -1.36
TRIM35Q9UPQ4 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM35Q9UPQ4 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM35Q9UPQ4 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
TRIM35Q9UPQ4 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM35Q9UPQ4 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms