Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 Y_RNA.688-201ENST00000516565 95 ntBASIC4.91□□□□□ -1.62
SHROOM4Q9ULL8 AP003181.2-201ENST00000528941 181 ntBASIC4.91□□□□□ -1.62
SHROOM4Q9ULL8 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC4.91□□□□□ -1.62
SHROOM4Q9ULL8 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.91□□□□□ -1.62
SHROOM4Q9ULL8 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.91□□□□□ -1.62
SHROOM4Q9ULL8 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.91□□□□□ -1.62
SHROOM4Q9ULL8 AC073308.1-201ENST00000623696 305 ntBASIC4.91□□□□□ -1.62
SHROOM4Q9ULL8 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHROOM4Q9ULL8 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC4.9□□□□□ -1.62
SHROOM4Q9ULL8 Y_RNA.4-201ENST00000362333 112 ntBASIC4.9□□□□□ -1.62
SHROOM4Q9ULL8 RNU6-270P-201ENST00000364131 105 ntBASIC4.9□□□□□ -1.62
SHROOM4Q9ULL8 SNORD114-30-201ENST00000364448 72 ntBASIC4.9□□□□□ -1.62
SHROOM4Q9ULL8 CD24P4-201ENST00000382840 243 ntBASIC4.9□□□□□ -1.62
SHROOM4Q9ULL8 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.9□□□□□ -1.62
SHROOM4Q9ULL8 AC009961.3-201ENST00000449832 765 ntBASIC4.9□□□□□ -1.62
SHROOM4Q9ULL8 MTND1P12-201ENST00000455231 147 ntBASIC4.9□□□□□ -1.62
SHROOM4Q9ULL8 RBM43P1-201ENST00000476891 1081 ntBASIC4.9□□□□□ -1.62
SHROOM4Q9ULL8 MIR3682-201ENST00000581338 84 ntBASIC4.9□□□□□ -1.62
SHROOM4Q9ULL8 NUTF2P8-201ENST00000604593 363 ntBASIC4.9□□□□□ -1.62
SHROOM4Q9ULL8 AC004852.3-201ENST00000614131 326 ntBASIC4.9□□□□□ -1.62
SHROOM4Q9ULL8 HDX-206ENST00000506585 6158 ntTSL 2 BASIC4.9□□□□□ -1.62
SHROOM4Q9ULL8 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SHROOM4Q9ULL8 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHROOM4Q9ULL8 RNU4-21P-201ENST00000362802 126 ntBASIC4.89□□□□□ -1.63
SHROOM4Q9ULL8 RNU4-91P-201ENST00000364778 135 ntBASIC4.89□□□□□ -1.63
SHROOM4Q9ULL8 RNU6-1027P-201ENST00000383998 107 ntBASIC4.89□□□□□ -1.63
SHROOM4Q9ULL8 MIR27B-201ENST00000385129 97 ntBASIC4.89□□□□□ -1.63
SHROOM4Q9ULL8 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SHROOM4Q9ULL8 SAR1AP2-201ENST00000392696 594 ntBASIC4.89□□□□□ -1.63
SHROOM4Q9ULL8 RNU6ATAC40P-201ENST00000408580 137 ntBASIC4.89□□□□□ -1.63
SHROOM4Q9ULL8 ZNF90P2-204ENST00000419323 1075 ntBASIC4.89□□□□□ -1.63
SHROOM4Q9ULL8 RPS15AP6-201ENST00000420703 385 ntBASIC4.89□□□□□ -1.63
SHROOM4Q9ULL8 AC099548.1-201ENST00000421443 426 ntBASIC4.89□□□□□ -1.63
SHROOM4Q9ULL8 MRPL50P4-201ENST00000446432 475 ntBASIC4.89□□□□□ -1.63
SHROOM4Q9ULL8 AC138853.1-201ENST00000503549 823 ntBASIC4.89□□□□□ -1.63
SHROOM4Q9ULL8 Y_RNA.672-201ENST00000516289 104 ntBASIC4.89□□□□□ -1.63
SHROOM4Q9ULL8 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.89□□□□□ -1.63
SHROOM4Q9ULL8 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.89□□□□□ -1.63
SHROOM4Q9ULL8 MIR548AB-201ENST00000584917 84 ntBASIC4.89□□□□□ -1.63
SHROOM4Q9ULL8 AL590229.1-201ENST00000603497 542 ntBASIC4.89□□□□□ -1.63
SHROOM4Q9ULL8 AC007938.3-201ENST00000604965 623 ntBASIC4.89□□□□□ -1.63
SHROOM4Q9ULL8 AC016727.1-205ENST00000605437 569 ntBASIC4.89□□□□□ -1.63
SHROOM4Q9ULL8 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHROOM4Q9ULL8 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHROOM4Q9ULL8 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.89□□□□□ -1.63
SHROOM4Q9ULL8 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.89□□□□□ -1.63
SHROOM4Q9ULL8 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHROOM4Q9ULL8 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
SHROOM4Q9ULL8 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 RNA5SP139-201ENST00000364340 117 ntBASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 OR2B8P-201ENST00000432841 938 ntBASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 MIR7111-201ENST00000619751 72 ntBASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 RNU6-1167P-201ENST00000363227 94 ntBASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 RNY1P12-201ENST00000364251 105 ntBASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 NDUFS5P1-201ENST00000405668 289 ntBASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 SEPT2P1-201ENST00000419651 180 ntBASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 DDX3P2-201ENST00000446138 111 ntBASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 SNRPGP9-201ENST00000456025 225 ntBASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 MTCO2P29-201ENST00000465212 189 ntBASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 MTND1P3-201ENST00000484956 952 ntBASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 AC132942.1-201ENST00000486753 483 ntBASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 HMGN1P30-201ENST00000589286 268 ntBASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 AP000860.1-201ENST00000605250 559 ntBASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 AC103710.2-201ENST00000609912 942 ntBASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 AC092628.2-201ENST00000622492 339 ntBASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 MIR7153-201ENST00000637758 57 ntBASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SHROOM4Q9ULL8 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SHROOM4Q9ULL8 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHROOM4Q9ULL8 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SHROOM4Q9ULL8 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SHROOM4Q9ULL8 MTND5P29-201ENST00000458676 1807 ntBASIC4.87□□□□□ -1.63
SHROOM4Q9ULL8 AC006020.1-201ENST00000420179 1854 ntBASIC4.87□□□□□ -1.63
SHROOM4Q9ULL8 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC4.87□□□□□ -1.63
SHROOM4Q9ULL8 UBE2L2-201ENST00000254302 429 ntBASIC4.87□□□□□ -1.63
SHROOM4Q9ULL8 U3.4-201ENST00000363352 213 ntBASIC4.87□□□□□ -1.63
SHROOM4Q9ULL8 RNU5E-6P-201ENST00000365574 115 ntBASIC4.87□□□□□ -1.63
SHROOM4Q9ULL8 AC009518.2-201ENST00000418056 731 ntBASIC4.87□□□□□ -1.63
SHROOM4Q9ULL8 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.87□□□□□ -1.63
SHROOM4Q9ULL8 ELOCP14-201ENST00000428070 331 ntBASIC4.87□□□□□ -1.63
SHROOM4Q9ULL8 ELOCP7-201ENST00000439968 331 ntBASIC4.87□□□□□ -1.63
SHROOM4Q9ULL8 PGBD4P3-201ENST00000440731 581 ntBASIC4.87□□□□□ -1.63
SHROOM4Q9ULL8 USP9YP15-201ENST00000442391 422 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 153.9 ms