Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC0.97□□□□□ -2.25
SCN11AQ9UI33 Z82190.1-201ENST00000454534 490 ntBASIC0.97□□□□□ -2.25
SCN11AQ9UI33 DUXAP8-207ENST00000456786 622 ntBASIC0.97□□□□□ -2.25
SCN11AQ9UI33 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.97□□□□□ -2.25
SCN11AQ9UI33 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC0.97□□□□□ -2.25
SCN11AQ9UI33 RNA5SP395-201ENST00000516567 118 ntBASIC0.97□□□□□ -2.25
SCN11AQ9UI33 RRN3P3-201ENST00000549207 578 ntBASIC0.97□□□□□ -2.25
SCN11AQ9UI33 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC0.97□□□□□ -2.25
SCN11AQ9UI33 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC0.97□□□□□ -2.25
SCN11AQ9UI33 AC005786.1-201ENST00000588553 154 ntBASIC0.97□□□□□ -2.25
SCN11AQ9UI33 AC106900.2-201ENST00000604994 317 ntBASIC0.97□□□□□ -2.25
SCN11AQ9UI33 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
SCN11AQ9UI33 MIR6835-201ENST00000621552 64 ntBASIC0.97□□□□□ -2.25
SCN11AQ9UI33 U3.29-201ENST00000391296 212 ntBASIC0.96□□□□□ -2.26
SCN11AQ9UI33 AL158823.1-201ENST00000418441 478 ntBASIC0.96□□□□□ -2.26
SCN11AQ9UI33 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC0.96□□□□□ -2.26
SCN11AQ9UI33 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC0.96□□□□□ -2.26
SCN11AQ9UI33 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
SCN11AQ9UI33 AP003072.2-201ENST00000527756 676 ntBASIC0.96□□□□□ -2.26
SCN11AQ9UI33 AC025423.2-201ENST00000537570 439 ntBASIC0.96□□□□□ -2.26
SCN11AQ9UI33 OR4G2P-201ENST00000328113 903 ntBASIC0.96□□□□□ -2.26
SCN11AQ9UI33 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC0.96□□□□□ -2.26
SCN11AQ9UI33 RPL7L1P10-201ENST00000427790 463 ntBASIC0.96□□□□□ -2.26
SCN11AQ9UI33 AC092393.1-201ENST00000439625 742 ntBASIC0.96□□□□□ -2.26
SCN11AQ9UI33 OR6C72P-201ENST00000451403 892 ntBASIC0.96□□□□□ -2.26
SCN11AQ9UI33 snoU13.7-201ENST00000459220 104 ntBASIC0.96□□□□□ -2.26
SCN11AQ9UI33 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.96□□□□□ -2.26
SCN11AQ9UI33 SNORA31.13-201ENST00000516624 135 ntBASIC0.96□□□□□ -2.26
SCN11AQ9UI33 AC104229.1-201ENST00000561364 255 ntBASIC0.96□□□□□ -2.26
SCN11AQ9UI33 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.96□□□□□ -2.26
SCN11AQ9UI33 AC123912.3-201ENST00000600907 1367 ntBASIC0.95□□□□□ -2.26
SCN11AQ9UI33 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.95□□□□□ -2.26
SCN11AQ9UI33 CYCSP23-201ENST00000519781 313 ntBASIC0.95□□□□□ -2.26
SCN11AQ9UI33 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.95□□□□□ -2.26
SCN11AQ9UI33 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.95□□□□□ -2.26
SCN11AQ9UI33 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.95□□□□□ -2.26
SCN11AQ9UI33 GAS5-AS1-201ENST00000602767 694 ntBASIC0.95□□□□□ -2.26
SCN11AQ9UI33 DUXAP11-201ENST00000603858 526 ntBASIC0.95□□□□□ -2.26
SCN11AQ9UI33 AC009229.3-201ENST00000608056 282 ntBASIC0.95□□□□□ -2.26
SCN11AQ9UI33 AC090132.2-201ENST00000615881 347 ntBASIC0.95□□□□□ -2.26
SCN11AQ9UI33 MIR26B-201ENST00000362251 77 ntBASIC0.94□□□□□ -2.26
SCN11AQ9UI33 Y_RNA.294-201ENST00000364916 102 ntBASIC0.94□□□□□ -2.26
SCN11AQ9UI33 RNU6-837P-201ENST00000391056 108 ntBASIC0.94□□□□□ -2.26
SCN11AQ9UI33 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC0.94□□□□□ -2.26
SCN11AQ9UI33 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.94□□□□□ -2.26
SCN11AQ9UI33 DYNLL1P5-201ENST00000467158 270 ntBASIC0.94□□□□□ -2.26
SCN11AQ9UI33 RPL30P5-201ENST00000494923 336 ntBASIC0.94□□□□□ -2.26
SCN11AQ9UI33 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.94□□□□□ -2.26
SCN11AQ9UI33 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC0.94□□□□□ -2.26
SCN11AQ9UI33 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
SCN11AQ9UI33 AC133485.1-201ENST00000567176 124 ntBASIC0.94□□□□□ -2.26
SCN11AQ9UI33 AC138907.6-201ENST00000568401 126 ntBASIC0.94□□□□□ -2.26
SCN11AQ9UI33 MIR4713-201ENST00000582691 75 ntBASIC0.94□□□□□ -2.26
SCN11AQ9UI33 AC115085.1-201ENST00000588924 229 ntBASIC0.94□□□□□ -2.26
SCN11AQ9UI33 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
SCN11AQ9UI33 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
SCN11AQ9UI33 AC008163.1-202ENST00000636004 2889 ntBASIC0.94□□□□□ -2.26
SCN11AQ9UI33 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
SCN11AQ9UI33 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.93□□□□□ -2.26
SCN11AQ9UI33 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC0.93□□□□□ -2.26
SCN11AQ9UI33 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC0.93□□□□□ -2.26
SCN11AQ9UI33 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC0.93□□□□□ -2.26
SCN11AQ9UI33 AC087481.2-201ENST00000565492 330 ntBASIC0.93□□□□□ -2.26
SCN11AQ9UI33 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.93□□□□□ -2.26
SCN11AQ9UI33 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC0.93□□□□□ -2.26
SCN11AQ9UI33 AP001330.4-201ENST00000604350 154 ntBASIC0.93□□□□□ -2.26
SCN11AQ9UI33 AC073111.2-201ENST00000605657 1075 ntBASIC0.93□□□□□ -2.26
SCN11AQ9UI33 OR4G3P-201ENST00000633500 913 ntBASIC0.93□□□□□ -2.26
SCN11AQ9UI33 RNU6-16P-201ENST00000384385 107 ntBASIC0.93□□□□□ -2.26
SCN11AQ9UI33 EDDM3CP-201ENST00000415977 425 ntBASIC0.93□□□□□ -2.26
SCN11AQ9UI33 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.93□□□□□ -2.26
SCN11AQ9UI33 RNU6-351P-201ENST00000516097 100 ntBASIC0.93□□□□□ -2.26
SCN11AQ9UI33 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.93□□□□□ -2.26
SCN11AQ9UI33 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.93□□□□□ -2.26
SCN11AQ9UI33 AC016925.2-201ENST00000605108 242 ntBASIC0.93□□□□□ -2.26
SCN11AQ9UI33 AC021646.1-201ENST00000605469 484 ntBASIC0.93□□□□□ -2.26
SCN11AQ9UI33 AP003476.1-201ENST00000623984 516 ntBASIC0.93□□□□□ -2.26
SCN11AQ9UI33 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.92□□□□□ -2.26
SCN11AQ9UI33 RNU6-939P-201ENST00000384634 107 ntBASIC0.92□□□□□ -2.26
SCN11AQ9UI33 AC079448.1-201ENST00000449377 373 ntBASIC0.92□□□□□ -2.26
SCN11AQ9UI33 RNU6-362P-201ENST00000516736 90 ntBASIC0.92□□□□□ -2.26
SCN11AQ9UI33 AC243960.4-201ENST00000600532 288 ntBASIC0.92□□□□□ -2.26
SCN11AQ9UI33 AL031775.1-201ENST00000607014 887 ntBASIC0.92□□□□□ -2.26
SCN11AQ9UI33 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC0.92□□□□□ -2.26
SCN11AQ9UI33 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
SCN11AQ9UI33 RNA5SP212-201ENST00000391223 107 ntBASIC0.91□□□□□ -2.26
SCN11AQ9UI33 RPL39P29-201ENST00000447779 157 ntBASIC0.91□□□□□ -2.26
SCN11AQ9UI33 SUMO2P2-201ENST00000456482 255 ntBASIC0.91□□□□□ -2.26
SCN11AQ9UI33 OR52A4P-202ENST00000481634 799 ntBASIC0.91□□□□□ -2.26
SCN11AQ9UI33 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
SCN11AQ9UI33 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC0.91□□□□□ -2.26
SCN11AQ9UI33 AC090666.1-201ENST00000578241 445 ntBASIC0.91□□□□□ -2.26
SCN11AQ9UI33 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC0.91□□□□□ -2.26
SCN11AQ9UI33 XIAPP1-201ENST00000603162 600 ntBASIC0.91□□□□□ -2.26
SCN11AQ9UI33 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.91□□□□□ -2.26
SCN11AQ9UI33 AC016716.1-201ENST00000265882 708 ntBASIC0.91□□□□□ -2.26
SCN11AQ9UI33 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.91□□□□□ -2.26
SCN11AQ9UI33 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.91□□□□□ -2.26
SCN11AQ9UI33 AC241584.1-201ENST00000438469 1241 ntBASIC0.91□□□□□ -2.26
SCN11AQ9UI33 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms