Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 IFNA20P-201ENST00000436840 528 ntBASIC4.08□□□□□ -1.76
USP25Q9UHP3 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.08□□□□□ -1.76
USP25Q9UHP3 RPS20P22-201ENST00000473700 357 ntBASIC4.08□□□□□ -1.76
USP25Q9UHP3 RN7SL132P-201ENST00000478131 296 ntBASIC4.08□□□□□ -1.76
USP25Q9UHP3 RNU2-27P-201ENST00000516185 142 ntBASIC4.08□□□□□ -1.76
USP25Q9UHP3 RNU6-277P-201ENST00000516272 106 ntBASIC4.08□□□□□ -1.76
USP25Q9UHP3 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.08□□□□□ -1.76
USP25Q9UHP3 ATP5F1P5-201ENST00000526403 760 ntBASIC4.08□□□□□ -1.76
USP25Q9UHP3 AC103843.2-201ENST00000530523 682 ntBASIC4.08□□□□□ -1.76
USP25Q9UHP3 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.08□□□□□ -1.76
USP25Q9UHP3 AC093027.1-201ENST00000546698 429 ntBASIC4.08□□□□□ -1.76
USP25Q9UHP3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.08□□□□□ -1.76
USP25Q9UHP3 PSMA3P-201ENST00000555485 635 ntBASIC4.08□□□□□ -1.76
USP25Q9UHP3 BNIP3P22-201ENST00000593399 556 ntBASIC4.08□□□□□ -1.76
USP25Q9UHP3 MTND4P35-201ENST00000604257 1375 ntBASIC4.08□□□□□ -1.76
USP25Q9UHP3 AC006077.1-201ENST00000604746 343 ntBASIC4.08□□□□□ -1.76
USP25Q9UHP3 uc_338.11-201ENST00000619132 160 ntBASIC4.08□□□□□ -1.76
USP25Q9UHP3 AC022149.2-201ENST00000621061 203 ntBASIC4.08□□□□□ -1.76
USP25Q9UHP3 PLCE1P1-201ENST00000622094 305 ntBASIC4.08□□□□□ -1.76
USP25Q9UHP3 MFSD8-236ENST00000641509 4050 ntBASIC4.08□□□□□ -1.76
USP25Q9UHP3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
USP25Q9UHP3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
USP25Q9UHP3 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
USP25Q9UHP3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC4.07□□□□□ -1.76
USP25Q9UHP3 AL513302.2-201ENST00000562313 1842 ntBASIC4.07□□□□□ -1.76
USP25Q9UHP3 AL021368.2-201ENST00000606125 5352 ntBASIC4.07□□□□□ -1.76
USP25Q9UHP3 Y_RNA.100-201ENST00000363141 102 ntBASIC4.07□□□□□ -1.76
USP25Q9UHP3 SNORA62.1-201ENST00000364287 154 ntBASIC4.07□□□□□ -1.76
USP25Q9UHP3 U3.12-201ENST00000364498 214 ntBASIC4.07□□□□□ -1.76
USP25Q9UHP3 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
USP25Q9UHP3 RNU6-641P-201ENST00000384006 107 ntBASIC4.07□□□□□ -1.76
USP25Q9UHP3 MIR591-201ENST00000385290 95 ntBASIC4.07□□□□□ -1.76
USP25Q9UHP3 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.07□□□□□ -1.76
USP25Q9UHP3 AL122016.1-201ENST00000403365 367 ntBASIC4.07□□□□□ -1.76
USP25Q9UHP3 RNU2-29P-201ENST00000410423 189 ntBASIC4.07□□□□□ -1.76
USP25Q9UHP3 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.07□□□□□ -1.76
USP25Q9UHP3 AL353678.1-201ENST00000422735 741 ntBASIC4.07□□□□□ -1.76
USP25Q9UHP3 AC092573.2-201ENST00000434546 243 ntBASIC4.07□□□□□ -1.76
USP25Q9UHP3 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.07□□□□□ -1.76
USP25Q9UHP3 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.07□□□□□ -1.76
USP25Q9UHP3 AC007677.1-201ENST00000445757 515 ntBASIC4.07□□□□□ -1.76
USP25Q9UHP3 RPS29P15-201ENST00000458329 171 ntBASIC4.07□□□□□ -1.76
USP25Q9UHP3 RN7SL442P-201ENST00000473804 320 ntBASIC4.07□□□□□ -1.76
USP25Q9UHP3 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.07□□□□□ -1.76
USP25Q9UHP3 RNU6-927P-201ENST00000516199 100 ntBASIC4.07□□□□□ -1.76
USP25Q9UHP3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.07□□□□□ -1.76
USP25Q9UHP3 RNU6-1092P-201ENST00000516955 87 ntBASIC4.07□□□□□ -1.76
USP25Q9UHP3 RNA5SP291-201ENST00000517222 105 ntBASIC4.07□□□□□ -1.76
USP25Q9UHP3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.07□□□□□ -1.76
USP25Q9UHP3 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.07□□□□□ -1.76
USP25Q9UHP3 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.07□□□□□ -1.76
USP25Q9UHP3 MIR4424-201ENST00000585257 86 ntBASIC4.07□□□□□ -1.76
USP25Q9UHP3 AC008962.1-201ENST00000605729 304 ntBASIC4.07□□□□□ -1.76
USP25Q9UHP3 AC068831.7-201ENST00000616954 363 ntBASIC4.07□□□□□ -1.76
USP25Q9UHP3 MIR6076-201ENST00000617521 113 ntBASIC4.07□□□□□ -1.76
USP25Q9UHP3 AC027309.3-201ENST00000623419 351 ntBASIC4.07□□□□□ -1.76
USP25Q9UHP3 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
USP25Q9UHP3 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
USP25Q9UHP3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
USP25Q9UHP3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
USP25Q9UHP3 MFSD8-233ENST00000641482 4860 ntBASIC4.07□□□□□ -1.76
USP25Q9UHP3 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
USP25Q9UHP3 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
USP25Q9UHP3 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
USP25Q9UHP3 TPTE2P4-201ENST00000258589 1605 ntBASIC4.06□□□□□ -1.76
USP25Q9UHP3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
USP25Q9UHP3 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.06□□□□□ -1.76
USP25Q9UHP3 RNU6-741P-201ENST00000383889 107 ntBASIC4.06□□□□□ -1.76
USP25Q9UHP3 RNU6-38P-201ENST00000384085 107 ntBASIC4.06□□□□□ -1.76
USP25Q9UHP3 SNORD37.1-201ENST00000390968 65 ntBASIC4.06□□□□□ -1.76
USP25Q9UHP3 RPS4XP3-201ENST00000398541 413 ntBASIC4.06□□□□□ -1.76
USP25Q9UHP3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.06□□□□□ -1.76
USP25Q9UHP3 AC091390.3-201ENST00000426478 338 ntBASIC4.06□□□□□ -1.76
USP25Q9UHP3 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.06□□□□□ -1.76
USP25Q9UHP3 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.06□□□□□ -1.76
USP25Q9UHP3 AL118496.2-201ENST00000448300 230 ntBASIC4.06□□□□□ -1.76
USP25Q9UHP3 RNU6-333P-201ENST00000459117 107 ntBASIC4.06□□□□□ -1.76
USP25Q9UHP3 AC026427.2-201ENST00000506228 536 ntBASIC4.06□□□□□ -1.76
USP25Q9UHP3 AC092436.1-201ENST00000506450 503 ntBASIC4.06□□□□□ -1.76
USP25Q9UHP3 AC103851.1-201ENST00000506833 274 ntBASIC4.06□□□□□ -1.76
USP25Q9UHP3 TTC39CP1-201ENST00000512513 755 ntBASIC4.06□□□□□ -1.76
USP25Q9UHP3 Y_RNA.691-201ENST00000516611 103 ntBASIC4.06□□□□□ -1.76
USP25Q9UHP3 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.06□□□□□ -1.76
USP25Q9UHP3 BTF3P12-201ENST00000519620 469 ntBASIC4.06□□□□□ -1.76
USP25Q9UHP3 RANP9-201ENST00000519957 271 ntBASIC4.06□□□□□ -1.76
USP25Q9UHP3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.06□□□□□ -1.76
USP25Q9UHP3 AL442663.2-201ENST00000554385 511 ntBASIC4.06□□□□□ -1.76
USP25Q9UHP3 MIR4703-201ENST00000577728 79 ntBASIC4.06□□□□□ -1.76
USP25Q9UHP3 RN7SL703P-201ENST00000578485 302 ntBASIC4.06□□□□□ -1.76
USP25Q9UHP3 MIR4742-201ENST00000581069 85 ntBASIC4.06□□□□□ -1.76
USP25Q9UHP3 AC243960.4-201ENST00000600532 288 ntBASIC4.06□□□□□ -1.76
USP25Q9UHP3 AC005034.5-201ENST00000604219 466 ntBASIC4.06□□□□□ -1.76
USP25Q9UHP3 MIR92B-201ENST00000607575 96 ntBASIC4.06□□□□□ -1.76
USP25Q9UHP3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.05□□□□□ -1.76
USP25Q9UHP3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
USP25Q9UHP3 AC007785.2-201ENST00000598627 1916 ntBASIC4.05□□□□□ -1.76
USP25Q9UHP3 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
USP25Q9UHP3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
USP25Q9UHP3 RNU6-960P-201ENST00000364056 120 ntBASIC4.05□□□□□ -1.76
USP25Q9UHP3 SNORA73.2-201ENST00000364946 201 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms