Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.6□□□□□ -1.83
USP29Q9HBJ7 NEFMP1-201ENST00000443423 1006 ntBASIC3.6□□□□□ -1.83
USP29Q9HBJ7 AMD1P1-201ENST00000457220 922 ntBASIC3.6□□□□□ -1.83
USP29Q9HBJ7 AC108860.1-201ENST00000484521 383 ntBASIC3.6□□□□□ -1.83
USP29Q9HBJ7 AC091885.1-201ENST00000506658 268 ntBASIC3.6□□□□□ -1.83
USP29Q9HBJ7 CCDC34P1-201ENST00000507441 517 ntBASIC3.6□□□□□ -1.83
USP29Q9HBJ7 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.6□□□□□ -1.83
USP29Q9HBJ7 AC112206.3-201ENST00000514578 389 ntBASIC3.6□□□□□ -1.83
USP29Q9HBJ7 RNA5SP468-201ENST00000516782 93 ntBASIC3.6□□□□□ -1.83
USP29Q9HBJ7 RNU6-840P-201ENST00000517275 65 ntBASIC3.6□□□□□ -1.83
USP29Q9HBJ7 AP000889.1-201ENST00000530968 660 ntBASIC3.6□□□□□ -1.83
USP29Q9HBJ7 SNRPGP16-201ENST00000533275 226 ntBASIC3.6□□□□□ -1.83
USP29Q9HBJ7 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.6□□□□□ -1.83
USP29Q9HBJ7 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.6□□□□□ -1.83
USP29Q9HBJ7 BNIP3P6-201ENST00000549284 499 ntBASIC3.6□□□□□ -1.83
USP29Q9HBJ7 AL118558.2-201ENST00000556294 238 ntBASIC3.6□□□□□ -1.83
USP29Q9HBJ7 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.6□□□□□ -1.83
USP29Q9HBJ7 MIR5583-1-201ENST00000580941 59 ntBASIC3.6□□□□□ -1.83
USP29Q9HBJ7 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.6□□□□□ -1.83
USP29Q9HBJ7 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.6□□□□□ -1.83
USP29Q9HBJ7 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.6□□□□□ -1.83
USP29Q9HBJ7 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.6□□□□□ -1.83
USP29Q9HBJ7 BDH2P1-201ENST00000602288 736 ntBASIC3.6□□□□□ -1.83
USP29Q9HBJ7 AC103710.3-201ENST00000608157 948 ntBASIC3.6□□□□□ -1.83
USP29Q9HBJ7 AC012409.4-201ENST00000612923 249 ntBASIC3.6□□□□□ -1.83
USP29Q9HBJ7 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
USP29Q9HBJ7 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
USP29Q9HBJ7 TPTE2P4-201ENST00000258589 1605 ntBASIC3.59□□□□□ -1.83
USP29Q9HBJ7 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
USP29Q9HBJ7 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
USP29Q9HBJ7 Y_RNA.61-201ENST00000362835 102 ntBASIC3.59□□□□□ -1.83
USP29Q9HBJ7 Y_RNA.166-201ENST00000363730 102 ntBASIC3.59□□□□□ -1.83
USP29Q9HBJ7 Y_RNA.167-201ENST00000363735 109 ntBASIC3.59□□□□□ -1.83
USP29Q9HBJ7 U3.12-201ENST00000364498 214 ntBASIC3.59□□□□□ -1.83
USP29Q9HBJ7 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
USP29Q9HBJ7 SNORD37.1-201ENST00000390968 65 ntBASIC3.59□□□□□ -1.83
USP29Q9HBJ7 RN7SKP140-201ENST00000411196 284 ntBASIC3.59□□□□□ -1.83
USP29Q9HBJ7 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.59□□□□□ -1.83
USP29Q9HBJ7 MTCO3P46-201ENST00000425787 232 ntBASIC3.59□□□□□ -1.83
USP29Q9HBJ7 AC073063.1-201ENST00000434352 607 ntBASIC3.59□□□□□ -1.83
USP29Q9HBJ7 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.59□□□□□ -1.83
USP29Q9HBJ7 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.59□□□□□ -1.83
USP29Q9HBJ7 AC006539.3-201ENST00000454258 129 ntBASIC3.59□□□□□ -1.83
USP29Q9HBJ7 CEACAMP4-201ENST00000457676 421 ntBASIC3.59□□□□□ -1.83
USP29Q9HBJ7 SNRPFP3-201ENST00000457792 225 ntBASIC3.59□□□□□ -1.83
USP29Q9HBJ7 AC021205.2-201ENST00000480069 347 ntBASIC3.59□□□□□ -1.83
USP29Q9HBJ7 RPL21P99-201ENST00000480369 423 ntBASIC3.59□□□□□ -1.83
USP29Q9HBJ7 RPS4XP13-201ENST00000483219 789 ntBASIC3.59□□□□□ -1.83
USP29Q9HBJ7 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.59□□□□□ -1.83
USP29Q9HBJ7 RNU6-123P-201ENST00000516163 102 ntBASIC3.59□□□□□ -1.83
USP29Q9HBJ7 Y_RNA.665-201ENST00000516177 98 ntBASIC3.59□□□□□ -1.83
USP29Q9HBJ7 MIR2276-201ENST00000516886 89 ntBASIC3.59□□□□□ -1.83
USP29Q9HBJ7 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.59□□□□□ -1.83
USP29Q9HBJ7 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.59□□□□□ -1.83
USP29Q9HBJ7 AC107953.1-201ENST00000522216 297 ntBASIC3.59□□□□□ -1.83
USP29Q9HBJ7 MED28P6-201ENST00000558776 231 ntBASIC3.59□□□□□ -1.83
USP29Q9HBJ7 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.59□□□□□ -1.83
USP29Q9HBJ7 RPL23AP84-201ENST00000571193 464 ntBASIC3.59□□□□□ -1.83
USP29Q9HBJ7 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.59□□□□□ -1.83
USP29Q9HBJ7 MIR3922-201ENST00000585192 84 ntBASIC3.59□□□□□ -1.83
USP29Q9HBJ7 AC104763.2-201ENST00000604179 382 ntBASIC3.59□□□□□ -1.83
USP29Q9HBJ7 AL390240.1-201ENST00000612950 384 ntBASIC3.59□□□□□ -1.83
USP29Q9HBJ7 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.59□□□□□ -1.83
USP29Q9HBJ7 U4.6-201ENST00000621618 127 ntBASIC3.59□□□□□ -1.83
USP29Q9HBJ7 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.59□□□□□ -1.83
USP29Q9HBJ7 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
USP29Q9HBJ7 MFSD8-233ENST00000641482 4860 ntBASIC3.59□□□□□ -1.84
USP29Q9HBJ7 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.84
USP29Q9HBJ7 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
USP29Q9HBJ7 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
USP29Q9HBJ7 AC073544.1-201ENST00000600110 1595 ntBASIC3.59□□□□□ -1.84
USP29Q9HBJ7 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.58□□□□□ -1.84
USP29Q9HBJ7 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
USP29Q9HBJ7 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
USP29Q9HBJ7 SDAD1P2-201ENST00000441308 2028 ntBASIC3.58□□□□□ -1.84
USP29Q9HBJ7 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.58□□□□□ -1.84
USP29Q9HBJ7 RNU6-1287P-201ENST00000362914 107 ntBASIC3.58□□□□□ -1.84
USP29Q9HBJ7 RNU6-694P-201ENST00000364071 147 ntBASIC3.58□□□□□ -1.84
USP29Q9HBJ7 RNA5SP267-201ENST00000364893 126 ntBASIC3.58□□□□□ -1.84
USP29Q9HBJ7 SNORD81.2-201ENST00000365153 76 ntBASIC3.58□□□□□ -1.84
USP29Q9HBJ7 RNU4-66P-201ENST00000365199 138 ntBASIC3.58□□□□□ -1.84
USP29Q9HBJ7 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
USP29Q9HBJ7 RNU6-1060P-201ENST00000384664 107 ntBASIC3.58□□□□□ -1.84
USP29Q9HBJ7 RNVU1-14-201ENST00000384770 164 ntBASIC3.58□□□□□ -1.84
USP29Q9HBJ7 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.58□□□□□ -1.84
USP29Q9HBJ7 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.58□□□□□ -1.84
USP29Q9HBJ7 RNU4-46P-201ENST00000410818 138 ntBASIC3.58□□□□□ -1.84
USP29Q9HBJ7 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.58□□□□□ -1.84
USP29Q9HBJ7 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.58□□□□□ -1.84
USP29Q9HBJ7 OR6C66P-201ENST00000414917 930 ntBASIC3.58□□□□□ -1.84
USP29Q9HBJ7 AC092809.3-201ENST00000415453 231 ntBASIC3.58□□□□□ -1.84
USP29Q9HBJ7 AL451054.2-201ENST00000420896 202 ntBASIC3.58□□□□□ -1.84
USP29Q9HBJ7 ARF4P2-201ENST00000430209 526 ntBASIC3.58□□□□□ -1.84
USP29Q9HBJ7 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.58□□□□□ -1.84
USP29Q9HBJ7 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.58□□□□□ -1.84
USP29Q9HBJ7 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.58□□□□□ -1.84
USP29Q9HBJ7 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.58□□□□□ -1.84
USP29Q9HBJ7 RPS4XP2-201ENST00000458402 793 ntBASIC3.58□□□□□ -1.84
USP29Q9HBJ7 U3.44-201ENST00000458938 192 ntBASIC3.58□□□□□ -1.84
USP29Q9HBJ7 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms