Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 MTND4P27-201ENST00000450813 1354 ntBASIC4.98□□□□□ -1.61
TRAIPQ9BWF2 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.98□□□□□ -1.61
TRAIPQ9BWF2 MTCO1P12-201ENST00000414273 1543 ntBASIC4.97□□□□□ -1.61
TRAIPQ9BWF2 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.97□□□□□ -1.61
TRAIPQ9BWF2 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRAIPQ9BWF2 MTND5P19-201ENST00000424872 1794 ntBASIC4.97□□□□□ -1.61
TRAIPQ9BWF2 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRAIPQ9BWF2 RN7SKP263-201ENST00000411194 309 ntBASIC4.97□□□□□ -1.61
TRAIPQ9BWF2 AL354751.2-201ENST00000415471 210 ntBASIC4.97□□□□□ -1.61
TRAIPQ9BWF2 AL358472.1-201ENST00000431295 329 ntBASIC4.97□□□□□ -1.61
TRAIPQ9BWF2 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.97□□□□□ -1.61
TRAIPQ9BWF2 CYCSP32-201ENST00000440548 321 ntBASIC4.97□□□□□ -1.61
TRAIPQ9BWF2 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.97□□□□□ -1.61
TRAIPQ9BWF2 FTH1P2-201ENST00000466086 412 ntBASIC4.97□□□□□ -1.61
TRAIPQ9BWF2 AC103987.1-201ENST00000473394 348 ntBASIC4.97□□□□□ -1.61
TRAIPQ9BWF2 AC005741.1-201ENST00000511094 432 ntBASIC4.97□□□□□ -1.61
TRAIPQ9BWF2 RNU6-1213P-201ENST00000517075 94 ntBASIC4.97□□□□□ -1.61
TRAIPQ9BWF2 RNU6-711P-201ENST00000517255 106 ntBASIC4.97□□□□□ -1.61
TRAIPQ9BWF2 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.97□□□□□ -1.61
TRAIPQ9BWF2 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.97□□□□□ -1.61
TRAIPQ9BWF2 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.97□□□□□ -1.61
TRAIPQ9BWF2 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRAIPQ9BWF2 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRAIPQ9BWF2 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
TRAIPQ9BWF2 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.96□□□□□ -1.61
TRAIPQ9BWF2 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.96□□□□□ -1.61
TRAIPQ9BWF2 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.96□□□□□ -1.62
TRAIPQ9BWF2 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TRAIPQ9BWF2 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRAIPQ9BWF2 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRAIPQ9BWF2 RNU6-428P-201ENST00000362942 107 ntBASIC4.96□□□□□ -1.62
TRAIPQ9BWF2 Y_RNA.128-201ENST00000363391 112 ntBASIC4.96□□□□□ -1.62
TRAIPQ9BWF2 RNU1-100P-201ENST00000365255 165 ntBASIC4.96□□□□□ -1.62
TRAIPQ9BWF2 Y_RNA.646-201ENST00000410980 101 ntBASIC4.96□□□□□ -1.62
TRAIPQ9BWF2 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.96□□□□□ -1.62
TRAIPQ9BWF2 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.96□□□□□ -1.62
TRAIPQ9BWF2 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.96□□□□□ -1.62
TRAIPQ9BWF2 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TRAIPQ9BWF2 AL441985.1-201ENST00000457727 251 ntBASIC4.96□□□□□ -1.62
TRAIPQ9BWF2 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.96□□□□□ -1.62
TRAIPQ9BWF2 U3.44-201ENST00000458938 192 ntBASIC4.96□□□□□ -1.62
TRAIPQ9BWF2 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.96□□□□□ -1.62
TRAIPQ9BWF2 AC116655.1-201ENST00000508324 901 ntBASIC4.96□□□□□ -1.62
TRAIPQ9BWF2 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.96□□□□□ -1.62
TRAIPQ9BWF2 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.96□□□□□ -1.62
TRAIPQ9BWF2 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
TRAIPQ9BWF2 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.96□□□□□ -1.62
TRAIPQ9BWF2 AC005476.1-201ENST00000554427 397 ntBASIC4.96□□□□□ -1.62
TRAIPQ9BWF2 BNIP3P22-201ENST00000593399 556 ntBASIC4.96□□□□□ -1.62
TRAIPQ9BWF2 AL354984.3-201ENST00000604803 325 ntBASIC4.96□□□□□ -1.62
TRAIPQ9BWF2 AC134503.1-201ENST00000633048 54 ntBASIC4.96□□□□□ -1.62
TRAIPQ9BWF2 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRAIPQ9BWF2 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.96□□□□□ -1.62
TRAIPQ9BWF2 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.96□□□□□ -1.62
TRAIPQ9BWF2 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.96□□□□□ -1.62
TRAIPQ9BWF2 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.96□□□□□ -1.62
TRAIPQ9BWF2 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRAIPQ9BWF2 AC106871.1-201ENST00000568324 3102 ntBASIC4.96□□□□□ -1.62
TRAIPQ9BWF2 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
TRAIPQ9BWF2 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRAIPQ9BWF2 SNORD116-20-201ENST00000384529 92 ntBASIC4.95□□□□□ -1.62
TRAIPQ9BWF2 SNORD96B-201ENST00000386148 79 ntBASIC4.95□□□□□ -1.62
TRAIPQ9BWF2 AL590004.1-201ENST00000405321 300 ntBASIC4.95□□□□□ -1.62
TRAIPQ9BWF2 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.95□□□□□ -1.62
TRAIPQ9BWF2 AC006946.1-201ENST00000429106 328 ntBASIC4.95□□□□□ -1.62
TRAIPQ9BWF2 RPS29P17-201ENST00000430795 166 ntBASIC4.95□□□□□ -1.62
TRAIPQ9BWF2 AL133396.1-201ENST00000432048 687 ntBASIC4.95□□□□□ -1.62
TRAIPQ9BWF2 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.95□□□□□ -1.62
TRAIPQ9BWF2 RPS15AP5-201ENST00000436276 388 ntBASIC4.95□□□□□ -1.62
TRAIPQ9BWF2 NOTCH2P1-201ENST00000443481 624 ntBASIC4.95□□□□□ -1.62
TRAIPQ9BWF2 AC013470.1-201ENST00000453438 462 ntBASIC4.95□□□□□ -1.62
TRAIPQ9BWF2 MTCO3P10-201ENST00000455912 772 ntBASIC4.95□□□□□ -1.62
TRAIPQ9BWF2 AL031183.1-201ENST00000457667 207 ntBASIC4.95□□□□□ -1.62
TRAIPQ9BWF2 AC010618.1-201ENST00000469924 477 ntBASIC4.95□□□□□ -1.62
TRAIPQ9BWF2 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.95□□□□□ -1.62
TRAIPQ9BWF2 RNU6-581P-201ENST00000516214 105 ntBASIC4.95□□□□□ -1.62
TRAIPQ9BWF2 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRAIPQ9BWF2 AP005902.1-201ENST00000521358 186 ntBASIC4.95□□□□□ -1.62
TRAIPQ9BWF2 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.95□□□□□ -1.62
TRAIPQ9BWF2 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TRAIPQ9BWF2 AC011494.1-201ENST00000596454 237 ntBASIC4.95□□□□□ -1.62
TRAIPQ9BWF2 SRGNP1-201ENST00000603392 451 ntBASIC4.95□□□□□ -1.62
TRAIPQ9BWF2 AL080274.1-201ENST00000605565 220 ntBASIC4.95□□□□□ -1.62
TRAIPQ9BWF2 MIR3976-201ENST00000606807 139 ntBASIC4.95□□□□□ -1.62
TRAIPQ9BWF2 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC4.95□□□□□ -1.62
TRAIPQ9BWF2 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TRAIPQ9BWF2 AC140113.4-201ENST00000622087 222 ntBASIC4.95□□□□□ -1.62
TRAIPQ9BWF2 AC011944.2-201ENST00000624440 683 ntBASIC4.95□□□□□ -1.62
TRAIPQ9BWF2 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.95□□□□□ -1.62
TRAIPQ9BWF2 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
TRAIPQ9BWF2 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRAIPQ9BWF2 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
TRAIPQ9BWF2 CDC27P3-201ENST00000635418 1910 ntBASIC4.95□□□□□ -1.62
TRAIPQ9BWF2 CPHL1P-201ENST00000461341 3407 ntBASIC4.95□□□□□ -1.62
TRAIPQ9BWF2 AL672167.1-203ENST00000641299 2975 ntBASIC4.95□□□□□ -1.62
TRAIPQ9BWF2 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRAIPQ9BWF2 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRAIPQ9BWF2 AL136164.3-201ENST00000624429 3978 ntBASIC4.94□□□□□ -1.62
TRAIPQ9BWF2 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.94□□□□□ -1.62
TRAIPQ9BWF2 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms