Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 HSPE1P5-201ENST00000561489 272 ntBASIC2.61□□□□□ -1.99
VGLL1Q99990 MIR4795-201ENST00000584182 89 ntBASIC2.61□□□□□ -1.99
VGLL1Q99990 AC010928.3-201ENST00000587712 541 ntBASIC2.61□□□□□ -1.99
VGLL1Q99990 VN1R85P-201ENST00000601587 426 ntBASIC2.61□□□□□ -1.99
VGLL1Q99990 DPPA3P3-201ENST00000603842 430 ntBASIC2.61□□□□□ -1.99
VGLL1Q99990 CTHRC1P1-201ENST00000605383 469 ntBASIC2.61□□□□□ -1.99
VGLL1Q99990 AC092807.2-201ENST00000609367 243 ntBASIC2.61□□□□□ -1.99
VGLL1Q99990 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.61□□□□□ -1.99
VGLL1Q99990 AL365204.3-201ENST00000612448 685 ntBASIC2.61□□□□□ -1.99
VGLL1Q99990 AC012409.4-201ENST00000612923 249 ntBASIC2.61□□□□□ -1.99
VGLL1Q99990 SDR42E1P2-201ENST00000614861 481 ntBASIC2.61□□□□□ -1.99
VGLL1Q99990 uc_338.34-201ENST00000617467 174 ntBASIC2.61□□□□□ -1.99
VGLL1Q99990 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.61□□□□□ -1.99
VGLL1Q99990 MIR6810-201ENST00000622701 70 ntBASIC2.61□□□□□ -1.99
VGLL1Q99990 AC007998.5-201ENST00000622938 237 ntBASIC2.61□□□□□ -1.99
VGLL1Q99990 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.61□□□□□ -1.99
VGLL1Q99990 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
VGLL1Q99990 AL133216.2-202ENST00000634512 349 ntBASIC2.61□□□□□ -1.99
VGLL1Q99990 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.61□□□□□ -1.99
VGLL1Q99990 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
VGLL1Q99990 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.61□□□□□ -1.99
VGLL1Q99990 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.61□□□□□ -1.99
VGLL1Q99990 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
VGLL1Q99990 AC121333.1-201ENST00000567488 2709 ntBASIC2.61□□□□□ -1.99
VGLL1Q99990 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
VGLL1Q99990 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
VGLL1Q99990 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
VGLL1Q99990 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
VGLL1Q99990 MTND5P7-201ENST00000413558 1798 ntBASIC2.6□□□□□ -1.99
VGLL1Q99990 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
VGLL1Q99990 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
VGLL1Q99990 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
VGLL1Q99990 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
VGLL1Q99990 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
VGLL1Q99990 SNORD9-201ENST00000362566 104 ntBASIC2.6□□□□□ -1.99
VGLL1Q99990 SNORA31-201ENST00000362607 130 ntBASIC2.6□□□□□ -1.99
VGLL1Q99990 RNU4-79P-201ENST00000362764 141 ntBASIC2.6□□□□□ -1.99
VGLL1Q99990 RNA5SP189-201ENST00000364920 115 ntBASIC2.6□□□□□ -1.99
VGLL1Q99990 SNORA32.2-201ENST00000384049 122 ntBASIC2.6□□□□□ -1.99
VGLL1Q99990 SNORD37.1-201ENST00000390968 65 ntBASIC2.6□□□□□ -1.99
VGLL1Q99990 RNU6-510P-201ENST00000391239 108 ntBASIC2.6□□□□□ -1.99
VGLL1Q99990 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
VGLL1Q99990 RNU4-26P-201ENST00000410270 107 ntBASIC2.6□□□□□ -1.99
VGLL1Q99990 RNU4-46P-201ENST00000410818 138 ntBASIC2.6□□□□□ -1.99
VGLL1Q99990 RPL23AP82-202ENST00000427528 469 ntBASIC2.6□□□□□ -1.99
VGLL1Q99990 AL353705.1-201ENST00000433468 480 ntBASIC2.6□□□□□ -1.99
VGLL1Q99990 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.6□□□□□ -1.99
VGLL1Q99990 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.6□□□□□ -1.99
VGLL1Q99990 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.6□□□□□ -1.99
VGLL1Q99990 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.6□□□□□ -1.99
VGLL1Q99990 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.6□□□□□ -1.99
VGLL1Q99990 SNRPFP3-201ENST00000457792 225 ntBASIC2.6□□□□□ -1.99
VGLL1Q99990 snoU13.24-201ENST00000458998 104 ntBASIC2.6□□□□□ -1.99
VGLL1Q99990 RNU6-1208P-201ENST00000459588 107 ntBASIC2.6□□□□□ -1.99
VGLL1Q99990 AC007547.1-201ENST00000462177 490 ntBASIC2.6□□□□□ -1.99
VGLL1Q99990 CENPBD1P1-201ENST00000464061 469 ntBASIC2.6□□□□□ -1.99
VGLL1Q99990 AC103987.1-201ENST00000473394 348 ntBASIC2.6□□□□□ -1.99
VGLL1Q99990 AC093663.1-201ENST00000497190 394 ntBASIC2.6□□□□□ -1.99
VGLL1Q99990 HMGN1P11-201ENST00000508668 303 ntBASIC2.6□□□□□ -1.99
VGLL1Q99990 RNU6-123P-201ENST00000516163 102 ntBASIC2.6□□□□□ -1.99
VGLL1Q99990 RNU2-58P-201ENST00000516403 183 ntBASIC2.6□□□□□ -1.99
VGLL1Q99990 Y_RNA.691-201ENST00000516611 103 ntBASIC2.6□□□□□ -1.99
VGLL1Q99990 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.6□□□□□ -1.99
VGLL1Q99990 AC107934.2-201ENST00000518653 310 ntBASIC2.6□□□□□ -1.99
VGLL1Q99990 ERHP1-201ENST00000523006 310 ntBASIC2.6□□□□□ -1.99
VGLL1Q99990 IGKV2D-19-201ENST00000523346 262 ntBASIC2.6□□□□□ -1.99
VGLL1Q99990 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
VGLL1Q99990 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.6□□□□□ -1.99
VGLL1Q99990 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
VGLL1Q99990 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.6□□□□□ -1.99
VGLL1Q99990 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
VGLL1Q99990 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
VGLL1Q99990 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.6□□□□□ -1.99
VGLL1Q99990 OR11H5P-201ENST00000554039 926 ntBASIC2.6□□□□□ -1.99
VGLL1Q99990 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.6□□□□□ -1.99
VGLL1Q99990 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.6□□□□□ -1.99
VGLL1Q99990 AC019176.2-201ENST00000611579 315 ntBASIC2.6□□□□□ -1.99
VGLL1Q99990 AL731566.2-201ENST00000618971 317 ntBASIC2.6□□□□□ -1.99
VGLL1Q99990 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.6□□□□□ -1.99
VGLL1Q99990 U6.114-201ENST00000636407 96 ntBASIC2.6□□□□□ -1.99
VGLL1Q99990 MIR4275-201ENST00000636486 87 ntBASIC2.6□□□□□ -1.99
VGLL1Q99990 TPTEP1-208ENST00000636884 213 ntBASIC2.6□□□□□ -1.99
VGLL1Q99990 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.6□□□□□ -1.99
VGLL1Q99990 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
VGLL1Q99990 HSPA8P4-201ENST00000511877 1920 ntBASIC2.6□□□□□ -1.99
VGLL1Q99990 AL161912.2-201ENST00000565707 3007 ntBASIC2.6□□□□□ -1.99
VGLL1Q99990 AC008264.2-201ENST00000610193 3731 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.59□□□□□ -1.99
VGLL1Q99990 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.59□□□□□ -1.99
VGLL1Q99990 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
VGLL1Q99990 PTER-201ENST00000298942 3448 ntTSL 5 BASIC2.59□□□□□ -1.99
VGLL1Q99990 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
VGLL1Q99990 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
VGLL1Q99990 Y_RNA.100-201ENST00000363141 102 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 SNORA51.2-201ENST00000364595 132 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 RNA5SP51-201ENST00000364750 119 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 Y_RNA.301-201ENST00000364990 103 ntBASIC2.59□□□□□ -1.99
VGLL1Q99990 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
VGLL1Q99990 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.59□□□□□ -1.99
VGLL1Q99990 SNORA57.1-201ENST00000391227 145 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms