Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AC006378.2-201ENST00000623178 2476 ntBASIC2.11□□□□□ -2.07
FOXC2Q99958 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
FOXC2Q99958 AC110491.1-201ENST00000562191 2010 ntBASIC2.1□□□□□ -2.07
FOXC2Q99958 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.1□□□□□ -2.07
FOXC2Q99958 AP000568.1-201ENST00000282964 442 ntBASIC2.1□□□□□ -2.07
FOXC2Q99958 Y_RNA.4-201ENST00000362333 112 ntBASIC2.1□□□□□ -2.07
FOXC2Q99958 RNU6-853P-201ENST00000364306 107 ntBASIC2.1□□□□□ -2.07
FOXC2Q99958 Y_RNA.245-201ENST00000364493 95 ntBASIC2.1□□□□□ -2.07
FOXC2Q99958 RNU1-91P-201ENST00000364746 163 ntBASIC2.1□□□□□ -2.07
FOXC2Q99958 Y_RNA.338-201ENST00000365320 114 ntBASIC2.1□□□□□ -2.07
FOXC2Q99958 MIR320C1-201ENST00000408566 88 ntBASIC2.1□□□□□ -2.07
FOXC2Q99958 RN7SKP266-201ENST00000410232 287 ntBASIC2.1□□□□□ -2.07
FOXC2Q99958 MTCO1P17-201ENST00000411522 491 ntBASIC2.1□□□□□ -2.07
FOXC2Q99958 HIGD1AP15-201ENST00000416198 280 ntBASIC2.1□□□□□ -2.07
FOXC2Q99958 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.1□□□□□ -2.07
FOXC2Q99958 AL445669.1-201ENST00000426743 755 ntBASIC2.1□□□□□ -2.07
FOXC2Q99958 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.1□□□□□ -2.07
FOXC2Q99958 HMGB1P9-201ENST00000429856 646 ntBASIC2.1□□□□□ -2.07
FOXC2Q99958 MED14P1-201ENST00000430517 648 ntBASIC2.1□□□□□ -2.07
FOXC2Q99958 RSU1P2-202ENST00000437884 485 ntBASIC2.1□□□□□ -2.07
FOXC2Q99958 AC020550.1-201ENST00000447385 163 ntBASIC2.1□□□□□ -2.07
FOXC2Q99958 AP000852.1-201ENST00000472460 573 ntBASIC2.1□□□□□ -2.07
FOXC2Q99958 RPL23AP45-201ENST00000476406 468 ntBASIC2.1□□□□□ -2.07
FOXC2Q99958 RPS27AP10-201ENST00000496103 208 ntBASIC2.1□□□□□ -2.07
FOXC2Q99958 MTCYBP35-201ENST00000503630 1137 ntBASIC2.1□□□□□ -2.07
FOXC2Q99958 LTV1P1-201ENST00000510683 1237 ntBASIC2.1□□□□□ -2.07
FOXC2Q99958 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
FOXC2Q99958 MTND5P13-201ENST00000513046 1079 ntBASIC2.1□□□□□ -2.07
FOXC2Q99958 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.1□□□□□ -2.07
FOXC2Q99958 RNU1-104P-201ENST00000517280 175 ntBASIC2.1□□□□□ -2.07
FOXC2Q99958 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.1□□□□□ -2.07
FOXC2Q99958 MIR3670-2-201ENST00000582974 65 ntBASIC2.1□□□□□ -2.07
FOXC2Q99958 MIR3670-1-201ENST00000584160 65 ntBASIC2.1□□□□□ -2.07
FOXC2Q99958 MIR3670-3-201ENST00000584855 65 ntBASIC2.1□□□□□ -2.07
FOXC2Q99958 AC025811.1-201ENST00000604312 472 ntBASIC2.1□□□□□ -2.07
FOXC2Q99958 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.1□□□□□ -2.07
FOXC2Q99958 TUSC7.1-201ENST00000610969 165 ntBASIC2.1□□□□□ -2.07
FOXC2Q99958 MIR3670-4-201ENST00000612260 65 ntBASIC2.1□□□□□ -2.07
FOXC2Q99958 AP002791.1-201ENST00000623291 381 ntBASIC2.1□□□□□ -2.07
FOXC2Q99958 AP000676.3-201ENST00000623299 569 ntBASIC2.1□□□□□ -2.07
FOXC2Q99958 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.1□□□□□ -2.07
FOXC2Q99958 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
FOXC2Q99958 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
FOXC2Q99958 AC010889.1-201ENST00000566193 2666 ntBASIC2.1□□□□□ -2.07
FOXC2Q99958 MTND5P29-201ENST00000458676 1807 ntBASIC2.1□□□□□ -2.07
FOXC2Q99958 MTND4P27-201ENST00000450813 1354 ntBASIC2.1□□□□□ -2.07
FOXC2Q99958 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.09□□□□□ -2.07
FOXC2Q99958 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
FOXC2Q99958 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
FOXC2Q99958 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.09□□□□□ -2.07
FOXC2Q99958 RNU6-778P-201ENST00000363269 103 ntBASIC2.09□□□□□ -2.07
FOXC2Q99958 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
FOXC2Q99958 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
FOXC2Q99958 RNU6-1200P-201ENST00000384162 107 ntBASIC2.09□□□□□ -2.07
FOXC2Q99958 AL079342.1-201ENST00000401460 267 ntBASIC2.09□□□□□ -2.07
FOXC2Q99958 RPL17P12-201ENST00000413391 526 ntBASIC2.09□□□□□ -2.07
FOXC2Q99958 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.09□□□□□ -2.07
FOXC2Q99958 SKA2P1-201ENST00000425592 390 ntBASIC2.09□□□□□ -2.07
FOXC2Q99958 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.09□□□□□ -2.07
FOXC2Q99958 AC244035.1-201ENST00000430042 390 ntBASIC2.09□□□□□ -2.07
FOXC2Q99958 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.09□□□□□ -2.07
FOXC2Q99958 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.09□□□□□ -2.07
FOXC2Q99958 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.09□□□□□ -2.07
FOXC2Q99958 AL117351.1-201ENST00000438864 766 ntBASIC2.09□□□□□ -2.07
FOXC2Q99958 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.09□□□□□ -2.07
FOXC2Q99958 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.09□□□□□ -2.07
FOXC2Q99958 HMGN2P23-201ENST00000456759 269 ntBASIC2.09□□□□□ -2.07
FOXC2Q99958 AC010631.1-201ENST00000474150 156 ntBASIC2.09□□□□□ -2.07
FOXC2Q99958 AC093809.1-201ENST00000509155 340 ntBASIC2.09□□□□□ -2.07
FOXC2Q99958 TBCAP3-201ENST00000512475 312 ntBASIC2.09□□□□□ -2.07
FOXC2Q99958 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.09□□□□□ -2.07
FOXC2Q99958 RNA5SP216-201ENST00000516111 123 ntBASIC2.09□□□□□ -2.07
FOXC2Q99958 RNU6-390P-201ENST00000516259 103 ntBASIC2.09□□□□□ -2.07
FOXC2Q99958 Y_RNA.717-201ENST00000517106 92 ntBASIC2.09□□□□□ -2.07
FOXC2Q99958 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.09□□□□□ -2.07
FOXC2Q99958 OR4R1P-201ENST00000529879 463 ntBASIC2.09□□□□□ -2.07
FOXC2Q99958 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.09□□□□□ -2.07
FOXC2Q99958 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
FOXC2Q99958 AC009094.1-201ENST00000564443 426 ntBASIC2.09□□□□□ -2.07
FOXC2Q99958 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.09□□□□□ -2.07
FOXC2Q99958 AC135628.1-201ENST00000568867 534 ntBASIC2.09□□□□□ -2.07
FOXC2Q99958 AC007151.1-201ENST00000572774 483 ntBASIC2.09□□□□□ -2.07
FOXC2Q99958 MIR4658-201ENST00000584344 65 ntBASIC2.09□□□□□ -2.07
FOXC2Q99958 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.09□□□□□ -2.07
FOXC2Q99958 AC008751.2-201ENST00000597885 980 ntBASIC2.09□□□□□ -2.07
FOXC2Q99958 AC018714.1-201ENST00000605028 208 ntBASIC2.09□□□□□ -2.07
FOXC2Q99958 BCRP9-201ENST00000605312 388 ntBASIC2.09□□□□□ -2.07
FOXC2Q99958 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
FOXC2Q99958 AL589743.7-201ENST00000612637 233 ntBASIC2.09□□□□□ -2.07
FOXC2Q99958 HMGB1P24-202ENST00000615653 685 ntBASIC2.09□□□□□ -2.07
FOXC2Q99958 AL449363.1-201ENST00000617815 186 ntBASIC2.09□□□□□ -2.07
FOXC2Q99958 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.09□□□□□ -2.07
FOXC2Q99958 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
FOXC2Q99958 AC004520.1-201ENST00000608362 1413 ntBASIC2.08□□□□□ -2.08
FOXC2Q99958 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.08□□□□□ -2.08
FOXC2Q99958 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.08□□□□□ -2.08
FOXC2Q99958 RNU6-1159P-201ENST00000362933 107 ntBASIC2.08□□□□□ -2.08
FOXC2Q99958 RNU6-1083P-201ENST00000384022 107 ntBASIC2.08□□□□□ -2.08
FOXC2Q99958 BTF3P7-201ENST00000407097 488 ntBASIC2.08□□□□□ -2.08
FOXC2Q99958 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms