Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
ZNF48Q96MX3 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
ZNF48Q96MX3 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
ZNF48Q96MX3 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.39□□□□□ -1.87
ZNF48Q96MX3 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.39□□□□□ -1.87
ZNF48Q96MX3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
ZNF48Q96MX3 AC103710.2-202ENST00000641454 2853 ntBASIC3.38□□□□□ -1.87
ZNF48Q96MX3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ZNF48Q96MX3 AC018555.1-201ENST00000567548 1980 ntBASIC3.38□□□□□ -1.87
ZNF48Q96MX3 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ZNF48Q96MX3 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.38□□□□□ -1.87
ZNF48Q96MX3 AC007256.1-201ENST00000392253 2765 ntBASIC3.38□□□□□ -1.87
ZNF48Q96MX3 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.38□□□□□ -1.87
ZNF48Q96MX3 RNU6-960P-201ENST00000364056 120 ntBASIC3.38□□□□□ -1.87
ZNF48Q96MX3 Y_RNA.252-201ENST00000364556 101 ntBASIC3.38□□□□□ -1.87
ZNF48Q96MX3 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
ZNF48Q96MX3 SNORA75B-201ENST00000384053 137 ntBASIC3.38□□□□□ -1.87
ZNF48Q96MX3 RNU6-890P-201ENST00000384121 107 ntBASIC3.38□□□□□ -1.87
ZNF48Q96MX3 Y_RNA.463-201ENST00000384271 102 ntBASIC3.38□□□□□ -1.87
ZNF48Q96MX3 RNU6-1127P-201ENST00000384580 107 ntBASIC3.38□□□□□ -1.87
ZNF48Q96MX3 RNU6-1222P-201ENST00000384615 107 ntBASIC3.38□□□□□ -1.87
ZNF48Q96MX3 MIR554-201ENST00000384874 96 ntBASIC3.38□□□□□ -1.87
ZNF48Q96MX3 MIR513A2-201ENST00000385249 127 ntBASIC3.38□□□□□ -1.87
ZNF48Q96MX3 RNA5SP219-201ENST00000390940 113 ntBASIC3.38□□□□□ -1.87
ZNF48Q96MX3 SNORD66.1-201ENST00000391230 76 ntBASIC3.38□□□□□ -1.87
ZNF48Q96MX3 MIR1179-201ENST00000408703 91 ntBASIC3.38□□□□□ -1.87
ZNF48Q96MX3 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.38□□□□□ -1.87
ZNF48Q96MX3 RNU6-387P-201ENST00000411331 105 ntBASIC3.38□□□□□ -1.87
ZNF48Q96MX3 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
ZNF48Q96MX3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.38□□□□□ -1.87
ZNF48Q96MX3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.38□□□□□ -1.87
ZNF48Q96MX3 HLA-N-201ENST00000437516 135 ntBASIC3.38□□□□□ -1.87
ZNF48Q96MX3 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.38□□□□□ -1.87
ZNF48Q96MX3 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.38□□□□□ -1.87
ZNF48Q96MX3 CECR9-201ENST00000453421 199 ntBASIC3.38□□□□□ -1.87
ZNF48Q96MX3 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.38□□□□□ -1.87
ZNF48Q96MX3 U3.44-201ENST00000458938 192 ntBASIC3.38□□□□□ -1.87
ZNF48Q96MX3 SCARNA18-201ENST00000459004 134 ntBASIC3.38□□□□□ -1.87
ZNF48Q96MX3 SNORD97-201ENST00000459187 142 ntBASIC3.38□□□□□ -1.87
ZNF48Q96MX3 RPL21P104-201ENST00000464143 478 ntBASIC3.38□□□□□ -1.87
ZNF48Q96MX3 RPS26P15-201ENST00000488067 348 ntBASIC3.38□□□□□ -1.87
ZNF48Q96MX3 RN7SL604P-201ENST00000492589 296 ntBASIC3.38□□□□□ -1.87
ZNF48Q96MX3 AC097473.1-201ENST00000508142 408 ntBASIC3.38□□□□□ -1.87
ZNF48Q96MX3 HIGD1AP13-201ENST00000509878 289 ntBASIC3.38□□□□□ -1.87
ZNF48Q96MX3 RNU6-1016P-201ENST00000516689 94 ntBASIC3.38□□□□□ -1.87
ZNF48Q96MX3 RNU6-1092P-201ENST00000516955 87 ntBASIC3.38□□□□□ -1.87
ZNF48Q96MX3 AC006064.5-201ENST00000541782 248 ntBASIC3.38□□□□□ -1.87
ZNF48Q96MX3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.38□□□□□ -1.87
ZNF48Q96MX3 MTCO3P23-201ENST00000561363 289 ntBASIC3.38□□□□□ -1.87
ZNF48Q96MX3 RPL23AP87-202ENST00000573039 466 ntBASIC3.38□□□□□ -1.87
ZNF48Q96MX3 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.38□□□□□ -1.87
ZNF48Q96MX3 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.38□□□□□ -1.87
ZNF48Q96MX3 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.38□□□□□ -1.87
ZNF48Q96MX3 FAM157A-202ENST00000615155 405 ntBASIC3.38□□□□□ -1.87
ZNF48Q96MX3 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ZNF48Q96MX3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.38□□□□□ -1.87
ZNF48Q96MX3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ZNF48Q96MX3 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ZNF48Q96MX3 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ZNF48Q96MX3 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
ZNF48Q96MX3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ZNF48Q96MX3 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.38□□□□□ -1.87
ZNF48Q96MX3 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ZNF48Q96MX3 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ZNF48Q96MX3 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ZNF48Q96MX3 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.37□□□□□ -1.87
ZNF48Q96MX3 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ZNF48Q96MX3 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ZNF48Q96MX3 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
ZNF48Q96MX3 RNU6-1078P-201ENST00000364522 103 ntBASIC3.37□□□□□ -1.87
ZNF48Q96MX3 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ZNF48Q96MX3 SET-203ENST00000372688 801 ntTSL 2 BASIC3.37□□□□□ -1.87
ZNF48Q96MX3 RNY1P14-201ENST00000384426 108 ntBASIC3.37□□□□□ -1.87
ZNF48Q96MX3 SNORD3H-201ENST00000384486 214 ntBASIC3.37□□□□□ -1.87
ZNF48Q96MX3 RNA5SP171-201ENST00000391071 115 ntBASIC3.37□□□□□ -1.87
ZNF48Q96MX3 MIR450B-201ENST00000401182 78 ntBASIC3.37□□□□□ -1.87
ZNF48Q96MX3 RNU6-712P-201ENST00000410558 100 ntBASIC3.37□□□□□ -1.87
ZNF48Q96MX3 RNU4-6P-201ENST00000410804 122 ntBASIC3.37□□□□□ -1.87
ZNF48Q96MX3 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.37□□□□□ -1.87
ZNF48Q96MX3 RPL30P2-201ENST00000414021 291 ntBASIC3.37□□□□□ -1.87
ZNF48Q96MX3 AC093106.2-201ENST00000428212 385 ntBASIC3.37□□□□□ -1.87
ZNF48Q96MX3 SNAP23P1-201ENST00000433229 246 ntBASIC3.37□□□□□ -1.87
ZNF48Q96MX3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.37□□□□□ -1.87
ZNF48Q96MX3 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.37□□□□□ -1.87
ZNF48Q96MX3 RNA5SP246-201ENST00000458909 119 ntBASIC3.37□□□□□ -1.87
ZNF48Q96MX3 snoU13.4-201ENST00000458916 104 ntBASIC3.37□□□□□ -1.87
ZNF48Q96MX3 RPL21P8-201ENST00000465083 535 ntBASIC3.37□□□□□ -1.87
ZNF48Q96MX3 RPS29P19-201ENST00000479709 171 ntBASIC3.37□□□□□ -1.87
ZNF48Q96MX3 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.37□□□□□ -1.87
ZNF48Q96MX3 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.37□□□□□ -1.87
ZNF48Q96MX3 AC108078.2-201ENST00000510750 236 ntBASIC3.37□□□□□ -1.87
ZNF48Q96MX3 RNU6-1271P-201ENST00000517049 105 ntBASIC3.37□□□□□ -1.87
ZNF48Q96MX3 IGKV2D-19-201ENST00000523346 262 ntBASIC3.37□□□□□ -1.87
ZNF48Q96MX3 AP002404.1-201ENST00000532005 451 ntBASIC3.37□□□□□ -1.87
ZNF48Q96MX3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.37□□□□□ -1.87
ZNF48Q96MX3 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.37□□□□□ -1.87
ZNF48Q96MX3 AL360157.1-201ENST00000565962 87 ntBASIC3.37□□□□□ -1.87
ZNF48Q96MX3 AC022655.2-201ENST00000577280 318 ntBASIC3.37□□□□□ -1.87
ZNF48Q96MX3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.37□□□□□ -1.87
ZNF48Q96MX3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms