Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AC092104.1-201ENST00000497346 1441 ntBASIC1.93□□□□□ -2.1
LINC00477Q96M19 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LINC00477Q96M19 RNU6-511P-201ENST00000363496 107 ntBASIC1.93□□□□□ -2.1
LINC00477Q96M19 RNU5F-7P-201ENST00000363696 115 ntBASIC1.93□□□□□ -2.1
LINC00477Q96M19 RNU5A-8P-201ENST00000364102 114 ntBASIC1.93□□□□□ -2.1
LINC00477Q96M19 RNU6-348P-201ENST00000384386 107 ntBASIC1.93□□□□□ -2.1
LINC00477Q96M19 MIR144-201ENST00000384886 86 ntBASIC1.93□□□□□ -2.1
LINC00477Q96M19 SNORD115.1-201ENST00000391109 76 ntBASIC1.93□□□□□ -2.1
LINC00477Q96M19 RNU6-248P-201ENST00000410720 107 ntBASIC1.93□□□□□ -2.1
LINC00477Q96M19 RN7SKP142-201ENST00000411236 328 ntBASIC1.93□□□□□ -2.1
LINC00477Q96M19 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.93□□□□□ -2.1
LINC00477Q96M19 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.93□□□□□ -2.1
LINC00477Q96M19 MTND4P32-201ENST00000437189 1237 ntBASIC1.93□□□□□ -2.1
LINC00477Q96M19 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC00477Q96M19 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.93□□□□□ -2.1
LINC00477Q96M19 AC009296.1-201ENST00000443146 155 ntBASIC1.93□□□□□ -2.1
LINC00477Q96M19 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.93□□□□□ -2.1
LINC00477Q96M19 USP9YP12-201ENST00000450481 570 ntBASIC1.93□□□□□ -2.1
LINC00477Q96M19 CACYBPP2-201ENST00000453625 678 ntBASIC1.93□□□□□ -2.1
LINC00477Q96M19 MTCYBP1-201ENST00000454315 1119 ntBASIC1.93□□□□□ -2.1
LINC00477Q96M19 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.93□□□□□ -2.1
LINC00477Q96M19 TPT1P7-201ENST00000458300 517 ntBASIC1.93□□□□□ -2.1
LINC00477Q96M19 AC133134.1-201ENST00000466800 359 ntBASIC1.93□□□□□ -2.1
LINC00477Q96M19 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC00477Q96M19 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC00477Q96M19 AC117522.2-201ENST00000510049 657 ntBASIC1.93□□□□□ -2.1
LINC00477Q96M19 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC00477Q96M19 AC091965.2-201ENST00000512324 613 ntBASIC1.93□□□□□ -2.1
LINC00477Q96M19 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.93□□□□□ -2.1
LINC00477Q96M19 SNORA31.11-201ENST00000516528 139 ntBASIC1.93□□□□□ -2.1
LINC00477Q96M19 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC00477Q96M19 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC00477Q96M19 AC090136.1-201ENST00000520009 240 ntBASIC1.93□□□□□ -2.1
LINC00477Q96M19 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.93□□□□□ -2.1
LINC00477Q96M19 CKS1BP7-201ENST00000522230 235 ntBASIC1.93□□□□□ -2.1
LINC00477Q96M19 ATP5F1P5-201ENST00000526403 760 ntBASIC1.93□□□□□ -2.1
LINC00477Q96M19 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC00477Q96M19 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC00477Q96M19 AC068135.2-201ENST00000569293 1028 ntBASIC1.93□□□□□ -2.1
LINC00477Q96M19 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC00477Q96M19 MIR4658-201ENST00000584344 65 ntBASIC1.93□□□□□ -2.1
LINC00477Q96M19 AC011471.1-201ENST00000585766 187 ntBASIC1.93□□□□□ -2.1
LINC00477Q96M19 RSL24D1P11-201ENST00000591045 491 ntBASIC1.93□□□□□ -2.1
LINC00477Q96M19 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LINC00477Q96M19 AL451007.1-201ENST00000595491 289 ntBASIC1.93□□□□□ -2.1
LINC00477Q96M19 AC068790.3-201ENST00000602988 553 ntBASIC1.93□□□□□ -2.1
LINC00477Q96M19 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.93□□□□□ -2.1
LINC00477Q96M19 AC245008.1-201ENST00000608123 476 ntBASIC1.93□□□□□ -2.1
LINC00477Q96M19 AC025594.3-201ENST00000613068 790 ntBASIC1.93□□□□□ -2.1
LINC00477Q96M19 AC009268.2-201ENST00000621925 457 ntBASIC1.93□□□□□ -2.1
LINC00477Q96M19 Z69908.1-201ENST00000622603 247 ntBASIC1.93□□□□□ -2.1
LINC00477Q96M19 AC073308.1-201ENST00000623696 305 ntBASIC1.93□□□□□ -2.1
LINC00477Q96M19 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.93□□□□□ -2.1
LINC00477Q96M19 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
LINC00477Q96M19 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LINC00477Q96M19 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.93□□□□□ -2.1
LINC00477Q96M19 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC00477Q96M19 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LINC00477Q96M19 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LINC00477Q96M19 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.92□□□□□ -2.1
LINC00477Q96M19 SNORA25.6-201ENST00000364121 118 ntBASIC1.92□□□□□ -2.1
LINC00477Q96M19 Y_RNA.333-201ENST00000365274 102 ntBASIC1.92□□□□□ -2.1
LINC00477Q96M19 Y_RNA.359-201ENST00000365498 102 ntBASIC1.92□□□□□ -2.1
LINC00477Q96M19 SNORA75-201ENST00000384158 137 ntBASIC1.92□□□□□ -2.1
LINC00477Q96M19 RNA5SP181-201ENST00000410246 98 ntBASIC1.92□□□□□ -2.1
LINC00477Q96M19 UBE2Q2P12-201ENST00000414573 204 ntBASIC1.92□□□□□ -2.1
LINC00477Q96M19 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC1.92□□□□□ -2.1
LINC00477Q96M19 AC092809.3-201ENST00000415453 231 ntBASIC1.92□□□□□ -2.1
LINC00477Q96M19 AC016907.1-201ENST00000419483 435 ntBASIC1.92□□□□□ -2.1
LINC00477Q96M19 RPS15AP12-201ENST00000419498 388 ntBASIC1.92□□□□□ -2.1
LINC00477Q96M19 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.92□□□□□ -2.1
LINC00477Q96M19 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.92□□□□□ -2.1
LINC00477Q96M19 AC007919.1-201ENST00000429380 217 ntBASIC1.92□□□□□ -2.1
LINC00477Q96M19 AL356867.1-201ENST00000429623 299 ntBASIC1.92□□□□□ -2.1
LINC00477Q96M19 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.92□□□□□ -2.1
LINC00477Q96M19 MTND6P13-201ENST00000443510 523 ntBASIC1.92□□□□□ -2.1
LINC00477Q96M19 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LINC00477Q96M19 ELOCP30-201ENST00000447108 299 ntBASIC1.92□□□□□ -2.1
LINC00477Q96M19 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.92□□□□□ -2.1
LINC00477Q96M19 RNU7-26P-201ENST00000458980 63 ntBASIC1.92□□□□□ -2.1
LINC00477Q96M19 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.92□□□□□ -2.1
LINC00477Q96M19 RPS29P20-201ENST00000489592 171 ntBASIC1.92□□□□□ -2.1
LINC00477Q96M19 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC1.92□□□□□ -2.1
LINC00477Q96M19 SLC25A15P5-201ENST00000508033 253 ntBASIC1.92□□□□□ -2.1
LINC00477Q96M19 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.92□□□□□ -2.1
LINC00477Q96M19 RNA5SP282-201ENST00000516355 108 ntBASIC1.92□□□□□ -2.1
LINC00477Q96M19 RNA5SP337-201ENST00000517007 109 ntBASIC1.92□□□□□ -2.1
LINC00477Q96M19 SNORA70.24-201ENST00000517233 118 ntBASIC1.92□□□□□ -2.1
LINC00477Q96M19 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.92□□□□□ -2.1
LINC00477Q96M19 DEFB108A-201ENST00000530110 222 ntBASIC1.92□□□□□ -2.1
LINC00477Q96M19 AC079600.2-201ENST00000550076 130 ntBASIC1.92□□□□□ -2.1
LINC00477Q96M19 RPL21P5-201ENST00000554662 472 ntBASIC1.92□□□□□ -2.1
LINC00477Q96M19 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.92□□□□□ -2.1
LINC00477Q96M19 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.92□□□□□ -2.1
LINC00477Q96M19 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.92□□□□□ -2.1
LINC00477Q96M19 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LINC00477Q96M19 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.92□□□□□ -2.1
LINC00477Q96M19 HMGB1P24-202ENST00000615653 685 ntBASIC1.92□□□□□ -2.1
LINC00477Q96M19 AC009509.4-201ENST00000619202 509 ntBASIC1.92□□□□□ -2.1
LINC00477Q96M19 AC009878.1-201ENST00000621819 340 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms