Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
MS4A3Q96HJ5 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.65□□□□□ -1.5
MS4A3Q96HJ5 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.65□□□□□ -1.5
MS4A3Q96HJ5 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.65□□□□□ -1.5
MS4A3Q96HJ5 SNORD8-201ENST00000363915 110 ntBASIC5.65□□□□□ -1.5
MS4A3Q96HJ5 RN7SKP237-201ENST00000364663 301 ntBASIC5.65□□□□□ -1.5
MS4A3Q96HJ5 RNA5SP235-201ENST00000365411 114 ntBASIC5.65□□□□□ -1.5
MS4A3Q96HJ5 MIR153-1-201ENST00000384914 90 ntBASIC5.65□□□□□ -1.5
MS4A3Q96HJ5 PTMAP5-201ENST00000393073 333 ntBASIC5.65□□□□□ -1.5
MS4A3Q96HJ5 AL031121.1-201ENST00000406553 254 ntBASIC5.65□□□□□ -1.5
MS4A3Q96HJ5 MRPS21P5-201ENST00000417885 231 ntBASIC5.65□□□□□ -1.5
MS4A3Q96HJ5 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC5.65□□□□□ -1.5
MS4A3Q96HJ5 RNU2-11P-201ENST00000459191 187 ntBASIC5.65□□□□□ -1.5
MS4A3Q96HJ5 AC044810.1-201ENST00000480271 711 ntBASIC5.65□□□□□ -1.5
MS4A3Q96HJ5 AC022206.1-201ENST00000495947 347 ntBASIC5.65□□□□□ -1.5
MS4A3Q96HJ5 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.65□□□□□ -1.5
MS4A3Q96HJ5 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC5.65□□□□□ -1.5
MS4A3Q96HJ5 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.65□□□□□ -1.5
MS4A3Q96HJ5 AC012368.3-201ENST00000604190 219 ntBASIC5.65□□□□□ -1.5
MS4A3Q96HJ5 AL162431.4-201ENST00000604674 411 ntBASIC5.65□□□□□ -1.5
MS4A3Q96HJ5 AL589743.6-201ENST00000611025 117 ntBASIC5.65□□□□□ -1.5
MS4A3Q96HJ5 AC006160.2-201ENST00000637708 154 ntBASIC5.65□□□□□ -1.5
MS4A3Q96HJ5 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
MS4A3Q96HJ5 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
MS4A3Q96HJ5 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
MS4A3Q96HJ5 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.65□□□□□ -1.51
MS4A3Q96HJ5 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
MS4A3Q96HJ5 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.65□□□□□ -1.51
MS4A3Q96HJ5 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC5.65□□□□□ -1.51
MS4A3Q96HJ5 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
MS4A3Q96HJ5 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
MS4A3Q96HJ5 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
MS4A3Q96HJ5 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.64□□□□□ -1.51
MS4A3Q96HJ5 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
MS4A3Q96HJ5 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
MS4A3Q96HJ5 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.64□□□□□ -1.51
MS4A3Q96HJ5 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
MS4A3Q96HJ5 RNU1-108P-201ENST00000362556 161 ntBASIC5.64□□□□□ -1.51
MS4A3Q96HJ5 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.64□□□□□ -1.51
MS4A3Q96HJ5 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.64□□□□□ -1.51
MS4A3Q96HJ5 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.64□□□□□ -1.51
MS4A3Q96HJ5 AC018645.1-201ENST00000505003 109 ntBASIC5.64□□□□□ -1.51
MS4A3Q96HJ5 RNU6-795P-201ENST00000516323 103 ntBASIC5.64□□□□□ -1.51
MS4A3Q96HJ5 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.64□□□□□ -1.51
MS4A3Q96HJ5 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.64□□□□□ -1.51
MS4A3Q96HJ5 AP000769.2-201ENST00000602344 396 ntBASIC5.64□□□□□ -1.51
MS4A3Q96HJ5 AC244100.4-201ENST00000617747 388 ntBASIC5.64□□□□□ -1.51
MS4A3Q96HJ5 AL162377.2-201ENST00000624532 337 ntBASIC5.64□□□□□ -1.51
MS4A3Q96HJ5 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.64□□□□□ -1.51
MS4A3Q96HJ5 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
MS4A3Q96HJ5 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
MS4A3Q96HJ5 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
MS4A3Q96HJ5 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.64□□□□□ -1.51
MS4A3Q96HJ5 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
MS4A3Q96HJ5 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
MS4A3Q96HJ5 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
MS4A3Q96HJ5 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
MS4A3Q96HJ5 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
MS4A3Q96HJ5 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
MS4A3Q96HJ5 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
MS4A3Q96HJ5 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 SNORD35A-201ENST00000363389 86 ntBASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 Y_RNA.796-201ENST00000364268 102 ntBASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 Y_RNA.298-201ENST00000364960 107 ntBASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 Y_RNA.799-201ENST00000364992 102 ntBASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 AC009804.1-201ENST00000400949 179 ntBASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 Y_RNA.620-201ENST00000411009 88 ntBASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 BTF3P4-201ENST00000418852 495 ntBASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 LINC00328-2P-201ENST00000436585 219 ntBASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 COX4I1P2-201ENST00000447446 547 ntBASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 AC092349.1-201ENST00000504903 310 ntBASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 AC096725.1-201ENST00000514266 313 ntBASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 AC116917.1-201ENST00000520558 305 ntBASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 AL133399.1-201ENST00000527476 298 ntBASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 MIR6085-201ENST00000618314 110 ntBASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 LINC02495-203ENST00000636704 242 ntBASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 SMG1P5-202ENST00000529428 4219 ntBASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 SMG1P2-201ENST00000566127 4221 ntBASIC5.63□□□□□ -1.51
MS4A3Q96HJ5 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
MS4A3Q96HJ5 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
MS4A3Q96HJ5 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.62□□□□□ -1.51
MS4A3Q96HJ5 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms