Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 IGLV3-26-201ENST00000520756 302 ntBASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 AC010186.2-204ENST00000537668 439 ntBASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 CR383656.7-201ENST00000548164 174 ntBASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 SYF2P1-201ENST00000550658 413 ntBASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 LRRC37A5P-203ENST00000580181 585 ntBASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 VN1R85P-201ENST00000601587 426 ntBASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 AC243829.7-201ENST00000633081 225 ntBASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 U6.92-201ENST00000636464 89 ntBASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 AL596275.2-204ENST00000641628 552 ntBASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 AL596275.2-206ENST00000641957 626 ntBASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 AC090740.1-201ENST00000623193 2262 ntBASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 AP001148.1-201ENST00000624124 2359 ntBASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.63□□□□□ -1.67
SHKBP1Q8TBC3 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 RNU1-94P-201ENST00000362627 173 ntBASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 RN7SKP51-201ENST00000410781 304 ntBASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 CYCSP33-201ENST00000414485 327 ntBASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 AC017079.2-201ENST00000416102 485 ntBASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 AC092573.2-201ENST00000434546 243 ntBASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 RPL23AP52-201ENST00000439311 478 ntBASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 MRPL42P6-201ENST00000486397 371 ntBASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 RNU6-390P-201ENST00000516259 103 ntBASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 AC134698.5-201ENST00000519444 336 ntBASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 AL442163.3-201ENST00000554110 156 ntBASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 NF1P5-201ENST00000588287 448 ntBASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 MIR15A-201ENST00000607334 83 ntBASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 AL590240.4-201ENST00000616908 390 ntBASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 SNORD39.4-201ENST00000620099 78 ntBASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 AC140113.4-201ENST00000622087 222 ntBASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 RNA5SP196-201ENST00000625967 102 ntBASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 AC139769.1-204ENST00000472297 1931 ntBASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHKBP1Q8TBC3 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 MIR383-201ENST00000362257 73 ntBASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 Y_RNA.143-201ENST00000363520 106 ntBASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 RNU6-288P-201ENST00000363690 104 ntBASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 SNORA37-201ENST00000384504 129 ntBASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 MIR578-201ENST00000384828 96 ntBASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 MIR3065-201ENST00000390137 79 ntBASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 SNORA11F-201ENST00000408237 128 ntBASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 RNA5SP317-201ENST00000410176 116 ntBASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 RNA5SP494-201ENST00000410653 129 ntBASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 RNU6-607P-201ENST00000411283 108 ntBASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 RNA5SP311-201ENST00000411290 116 ntBASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 Z74021.1-201ENST00000423610 407 ntBASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 AC234775.1-201ENST00000454247 670 ntBASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 snoU109.4-201ENST00000458953 143 ntBASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 AC133134.1-201ENST00000466800 359 ntBASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 COX6CP14-201ENST00000469580 174 ntBASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 RPL7P47-201ENST00000497299 556 ntBASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 Y_RNA.662-201ENST00000516028 97 ntBASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 RNA5SP315-201ENST00000516340 116 ntBASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 RNA5SP312-201ENST00000517068 116 ntBASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 AC098826.3-201ENST00000603823 466 ntBASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 AC079587.1-201ENST00000603846 277 ntBASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 AL591034.3-201ENST00000605511 685 ntBASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 AC073657.2-201ENST00000605661 303 ntBASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 AC006329.2-201ENST00000611491 394 ntBASIC4.61□□□□□ -1.67
SHKBP1Q8TBC3 AC140479.6-201ENST00000633535 357 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms