Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 AL137003.2-201ENST00000606924 2538 ntBASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 Y_RNA.127-201ENST00000363386 109 ntBASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 Y_RNA.215-201ENST00000364204 112 ntBASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 Y_RNA.480-201ENST00000384364 102 ntBASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 AL513475.1-201ENST00000406602 315 ntBASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 RNU2-52P-201ENST00000410680 190 ntBASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 MTCO1P39-201ENST00000426148 480 ntBASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 AC022022.1-201ENST00000430304 178 ntBASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 AC092573.2-201ENST00000434546 243 ntBASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 RPS26P56-201ENST00000444468 240 ntBASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 AC091167.1-201ENST00000492017 396 ntBASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 AC025755.1-201ENST00000521306 278 ntBASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 AP006245.1-201ENST00000522549 120 ntBASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 PARP1P2-201ENST00000556806 195 ntBASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 AC023824.2-201ENST00000566185 400 ntBASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 MIR3939-201ENST00000582614 106 ntBASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 AL359881.1-201ENST00000602916 267 ntBASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 AC091979.2-201ENST00000607514 214 ntBASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 MIR6716-201ENST00000613413 80 ntBASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 AL161637.1-201ENST00000622380 412 ntBASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 AC243829.7-201ENST00000633081 225 ntBASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 AP000542.2-201ENST00000623199 6179 ntBASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 AC026523.2-201ENST00000625039 7739 ntBASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.16□□□□□ -1.58
NEDD1Q8NHV4 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
NEDD1Q8NHV4 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
NEDD1Q8NHV4 AP000756.2-201ENST00000624168 2567 ntBASIC5.15□□□□□ -1.58
NEDD1Q8NHV4 AC009951.1-201ENST00000623674 2614 ntBASIC5.15□□□□□ -1.58
NEDD1Q8NHV4 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.15□□□□□ -1.58
NEDD1Q8NHV4 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
NEDD1Q8NHV4 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
NEDD1Q8NHV4 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
NEDD1Q8NHV4 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
NEDD1Q8NHV4 RNA5SP307-201ENST00000362863 116 ntBASIC5.15□□□□□ -1.59
NEDD1Q8NHV4 RNU1-132P-201ENST00000364300 164 ntBASIC5.15□□□□□ -1.59
NEDD1Q8NHV4 RNA5SP366-201ENST00000365454 123 ntBASIC5.15□□□□□ -1.59
NEDD1Q8NHV4 SNORD82-201ENST00000365530 70 ntBASIC5.15□□□□□ -1.59
NEDD1Q8NHV4 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
NEDD1Q8NHV4 SNORA74C-2-201ENST00000411179 201 ntBASIC5.15□□□□□ -1.59
NEDD1Q8NHV4 RNU6-516P-201ENST00000411381 104 ntBASIC5.15□□□□□ -1.59
NEDD1Q8NHV4 AP000936.3-201ENST00000438127 255 ntBASIC5.15□□□□□ -1.59
NEDD1Q8NHV4 RPL23AP52-201ENST00000439311 478 ntBASIC5.15□□□□□ -1.59
NEDD1Q8NHV4 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.15□□□□□ -1.59
NEDD1Q8NHV4 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.15□□□□□ -1.59
NEDD1Q8NHV4 AC008264.1-201ENST00000447612 367 ntBASIC5.15□□□□□ -1.59
NEDD1Q8NHV4 Y_RNA.638-201ENST00000459374 113 ntBASIC5.15□□□□□ -1.59
NEDD1Q8NHV4 PPIAP21-201ENST00000464473 501 ntBASIC5.15□□□□□ -1.59
NEDD1Q8NHV4 RN7SL812P-201ENST00000493791 279 ntBASIC5.15□□□□□ -1.59
NEDD1Q8NHV4 COX7A2P2-201ENST00000505291 250 ntBASIC5.15□□□□□ -1.59
NEDD1Q8NHV4 RN7SKP46-201ENST00000515942 234 ntBASIC5.15□□□□□ -1.59
NEDD1Q8NHV4 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.15□□□□□ -1.59
NEDD1Q8NHV4 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.15□□□□□ -1.59
NEDD1Q8NHV4 H3F3AP1-201ENST00000559984 334 ntBASIC5.15□□□□□ -1.59
NEDD1Q8NHV4 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.15□□□□□ -1.59
NEDD1Q8NHV4 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.15□□□□□ -1.59
NEDD1Q8NHV4 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
NEDD1Q8NHV4 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.15□□□□□ -1.59
NEDD1Q8NHV4 AL445567.2-201ENST00000618935 498 ntBASIC5.15□□□□□ -1.59
NEDD1Q8NHV4 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NEDD1Q8NHV4 AC097372.5-201ENST00000623665 376 ntBASIC5.15□□□□□ -1.59
NEDD1Q8NHV4 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.15□□□□□ -1.59
NEDD1Q8NHV4 AC140479.6-201ENST00000633535 357 ntBASIC5.15□□□□□ -1.59
NEDD1Q8NHV4 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NEDD1Q8NHV4 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.15□□□□□ -1.59
NEDD1Q8NHV4 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
NEDD1Q8NHV4 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NEDD1Q8NHV4 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
NEDD1Q8NHV4 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NEDD1Q8NHV4 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NEDD1Q8NHV4 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NEDD1Q8NHV4 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NEDD1Q8NHV4 AL672167.1-203ENST00000641299 2975 ntBASIC5.14□□□□□ -1.59
NEDD1Q8NHV4 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.14□□□□□ -1.59
NEDD1Q8NHV4 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
NEDD1Q8NHV4 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.14□□□□□ -1.59
NEDD1Q8NHV4 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
NEDD1Q8NHV4 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.14□□□□□ -1.59
NEDD1Q8NHV4 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NEDD1Q8NHV4 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NEDD1Q8NHV4 SNORA63.4-201ENST00000362763 126 ntBASIC5.14□□□□□ -1.59
NEDD1Q8NHV4 RNU4-90P-201ENST00000362773 141 ntBASIC5.14□□□□□ -1.59
NEDD1Q8NHV4 U3.13-201ENST00000364804 214 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms