Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 RNA5SP289-201ENST00000362332 137 ntBASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 RNU5E-8P-201ENST00000363502 116 ntBASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 RNA5SP479-201ENST00000364858 117 ntBASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 MIR597-201ENST00000384968 97 ntBASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 MIR9-3-201ENST00000385084 90 ntBASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 MRPL35P3-201ENST00000421557 364 ntBASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 RPS26P55-201ENST00000471178 356 ntBASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 AL121594.1-201ENST00000475906 575 ntBASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 AL133373.1-201ENST00000497098 94 ntBASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 AC025465.3-201ENST00000510570 311 ntBASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 AC008837.1-201ENST00000511513 412 ntBASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 AP003122.4-201ENST00000530980 758 ntBASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 OR5B19P-201ENST00000531766 928 ntBASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 AC095057.3-201ENST00000567102 1157 ntBASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 AC034105.4-201ENST00000568304 277 ntBASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 AL357094.1-201ENST00000603845 844 ntBASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 AL160281.1-201ENST00000605307 311 ntBASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 AC008121.3-201ENST00000618726 433 ntBASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 AC073569.3-201ENST00000619055 682 ntBASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 AC090617.9-201ENST00000623751 147 ntBASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 AC090517.3-201ENST00000625170 141 ntBASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 SGO1P1-201ENST00000603525 1447 ntBASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 5S_rRNA.1-201ENST00000364415 116 ntBASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 SNORA25.8-201ENST00000364831 128 ntBASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 RNA5SP88-201ENST00000365560 109 ntBASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 SNORD116-23-201ENST00000384645 92 ntBASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 RNU6-253P-201ENST00000384730 105 ntBASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 MIR525-201ENST00000384978 85 ntBASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 SNORA48.1-201ENST00000390879 135 ntBASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 RNU11-3P-201ENST00000391111 133 ntBASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 MIR1262-201ENST00000408276 93 ntBASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 RPL23AP36-201ENST00000413895 458 ntBASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 AC007435.1-201ENST00000421086 415 ntBASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 AC104454.1-201ENST00000421341 1401 ntBASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 RPS27P16-201ENST00000425758 201 ntBASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 AL354695.1-201ENST00000427935 228 ntBASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 AC092634.2-201ENST00000428146 1010 ntBASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 AC093422.3-201ENST00000428506 305 ntBASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 MTND2P21-201ENST00000436242 1042 ntBASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 AC025750.2-201ENST00000442609 450 ntBASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 H2AFZP6-201ENST00000444403 394 ntBASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 AMD1P1-201ENST00000457220 922 ntBASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 RPL36AP48-201ENST00000485521 314 ntBASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 AC106872.3-201ENST00000495104 446 ntBASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 SNORA67.7-201ENST00000516664 135 ntBASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 RNU6-667P-201ENST00000517186 102 ntBASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 AC090821.2-201ENST00000523552 176 ntBASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 AC110588.1-201ENST00000559699 137 ntBASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 LARP7P3-201ENST00000579888 337 ntBASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 AC004853.1-201ENST00000604902 698 ntBASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 NDUFA8P1-201ENST00000605525 367 ntBASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 AC093673.2-201ENST00000609674 331 ntBASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 AL121890.5-201ENST00000620848 304 ntBASIC0.68□□□□□ -2.3
SPTSSBQ8NFR3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.67□□□□□ -2.3
SPTSSBQ8NFR3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC0.67□□□□□ -2.3
SPTSSBQ8NFR3 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.67□□□□□ -2.3
SPTSSBQ8NFR3 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
SPTSSBQ8NFR3 RNU6-1164P-201ENST00000364428 107 ntBASIC0.67□□□□□ -2.3
SPTSSBQ8NFR3 RN7SKP284-201ENST00000411002 343 ntBASIC0.67□□□□□ -2.3
SPTSSBQ8NFR3 AC009963.1-201ENST00000417265 157 ntBASIC0.67□□□□□ -2.3
SPTSSBQ8NFR3 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.67□□□□□ -2.3
SPTSSBQ8NFR3 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.67□□□□□ -2.3
SPTSSBQ8NFR3 NANOGP2-201ENST00000435391 727 ntBASIC0.67□□□□□ -2.3
SPTSSBQ8NFR3 AL353706.1-201ENST00000436728 494 ntBASIC0.67□□□□□ -2.3
SPTSSBQ8NFR3 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
SPTSSBQ8NFR3 USP9YP10-201ENST00000454868 628 ntBASIC0.67□□□□□ -2.3
SPTSSBQ8NFR3 AC004924.1-201ENST00000480160 781 ntBASIC0.67□□□□□ -2.3
SPTSSBQ8NFR3 AC109927.2-201ENST00000506416 303 ntBASIC0.67□□□□□ -2.3
SPTSSBQ8NFR3 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC0.67□□□□□ -2.3
SPTSSBQ8NFR3 SNORA25.15-201ENST00000516487 89 ntBASIC0.67□□□□□ -2.3
SPTSSBQ8NFR3 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC0.67□□□□□ -2.3
SPTSSBQ8NFR3 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC0.67□□□□□ -2.3
SPTSSBQ8NFR3 SNORA77B-201ENST00000578179 125 ntBASIC0.67□□□□□ -2.3
SPTSSBQ8NFR3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.67□□□□□ -2.3
SPTSSBQ8NFR3 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC0.67□□□□□ -2.3
SPTSSBQ8NFR3 MIR4443-201ENST00000585052 53 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms