Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 SNORA70.10-201ENST00000384515 134 ntBASIC5.05□□□□□ -1.6
SIX5Q8N196 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SIX5Q8N196 AP000275.1-201ENST00000411943 390 ntBASIC5.05□□□□□ -1.6
SIX5Q8N196 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.05□□□□□ -1.6
SIX5Q8N196 AC016831.4-201ENST00000438302 307 ntBASIC5.05□□□□□ -1.6
SIX5Q8N196 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.05□□□□□ -1.6
SIX5Q8N196 SNORA31.8-201ENST00000516327 108 ntBASIC5.05□□□□□ -1.6
SIX5Q8N196 SNORA70.16-201ENST00000516390 95 ntBASIC5.05□□□□□ -1.6
SIX5Q8N196 RN7SKP272-201ENST00000516988 232 ntBASIC5.05□□□□□ -1.6
SIX5Q8N196 SNORA31.18-201ENST00000517043 134 ntBASIC5.05□□□□□ -1.6
SIX5Q8N196 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC5.05□□□□□ -1.6
SIX5Q8N196 MIR4300-201ENST00000581016 96 ntBASIC5.05□□□□□ -1.6
SIX5Q8N196 MIR6716-201ENST00000613413 80 ntBASIC5.05□□□□□ -1.6
SIX5Q8N196 MIR6133-201ENST00000617057 108 ntBASIC5.05□□□□□ -1.6
SIX5Q8N196 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SIX5Q8N196 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
SIX5Q8N196 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SIX5Q8N196 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SIX5Q8N196 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SIX5Q8N196 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SIX5Q8N196 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
SIX5Q8N196 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SIX5Q8N196 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.04□□□□□ -1.6
SIX5Q8N196 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.04□□□□□ -1.6
SIX5Q8N196 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
SIX5Q8N196 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.04□□□□□ -1.6
SIX5Q8N196 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SIX5Q8N196 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SIX5Q8N196 Y_RNA.65-201ENST00000362846 100 ntBASIC5.04□□□□□ -1.6
SIX5Q8N196 SNORD113.2-201ENST00000364166 89 ntBASIC5.04□□□□□ -1.6
SIX5Q8N196 Y_RNA.555-201ENST00000384673 110 ntBASIC5.04□□□□□ -1.6
SIX5Q8N196 SNORD115-46-201ENST00000390982 71 ntBASIC5.04□□□□□ -1.6
SIX5Q8N196 RPS29P13-201ENST00000402041 169 ntBASIC5.04□□□□□ -1.6
SIX5Q8N196 GPS2P1-201ENST00000411761 986 ntBASIC5.04□□□□□ -1.6
SIX5Q8N196 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.04□□□□□ -1.6
SIX5Q8N196 TMEM167AP1-201ENST00000423409 219 ntBASIC5.04□□□□□ -1.6
SIX5Q8N196 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC5.04□□□□□ -1.6
SIX5Q8N196 AC009237.8-201ENST00000445492 379 ntBASIC5.04□□□□□ -1.6
SIX5Q8N196 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC5.04□□□□□ -1.6
SIX5Q8N196 AC006026.2-201ENST00000457376 180 ntBASIC5.04□□□□□ -1.6
SIX5Q8N196 AC109327.1-201ENST00000471666 403 ntBASIC5.04□□□□□ -1.6
SIX5Q8N196 AC098976.1-201ENST00000513014 541 ntBASIC5.04□□□□□ -1.6
SIX5Q8N196 AF186190.1-201ENST00000517470 480 ntBASIC5.04□□□□□ -1.6
SIX5Q8N196 AP002770.2-201ENST00000543613 532 ntBASIC5.04□□□□□ -1.6
SIX5Q8N196 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.04□□□□□ -1.6
SIX5Q8N196 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.04□□□□□ -1.6
SIX5Q8N196 MIR4782-201ENST00000577987 79 ntBASIC5.04□□□□□ -1.6
SIX5Q8N196 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.04□□□□□ -1.6
SIX5Q8N196 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.04□□□□□ -1.6
SIX5Q8N196 AC010900.2-201ENST00000604508 210 ntBASIC5.04□□□□□ -1.6
SIX5Q8N196 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.04□□□□□ -1.6
SIX5Q8N196 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.04□□□□□ -1.6
SIX5Q8N196 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SIX5Q8N196 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
SIX5Q8N196 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SIX5Q8N196 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SIX5Q8N196 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
SIX5Q8N196 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SIX5Q8N196 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC5.03□□□□□ -1.6
SIX5Q8N196 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
SIX5Q8N196 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
SIX5Q8N196 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SIX5Q8N196 Y_RNA.29-201ENST00000362570 113 ntBASIC5.03□□□□□ -1.6
SIX5Q8N196 Y_RNA.143-201ENST00000363520 106 ntBASIC5.03□□□□□ -1.6
SIX5Q8N196 RNU6-1279P-201ENST00000383917 103 ntBASIC5.03□□□□□ -1.6
SIX5Q8N196 Y_RNA.539-201ENST00000384635 107 ntBASIC5.03□□□□□ -1.6
SIX5Q8N196 BX679664.1-201ENST00000434429 253 ntBASIC5.03□□□□□ -1.6
SIX5Q8N196 NDUFB4P8-201ENST00000435351 367 ntBASIC5.03□□□□□ -1.6
SIX5Q8N196 Z82210.1-201ENST00000440037 231 ntBASIC5.03□□□□□ -1.6
SIX5Q8N196 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC5.03□□□□□ -1.6
SIX5Q8N196 TOMM22P6-201ENST00000465035 409 ntBASIC5.03□□□□□ -1.6
SIX5Q8N196 RPL23AP49-201ENST00000492925 468 ntBASIC5.03□□□□□ -1.6
SIX5Q8N196 ENPP7P11-201ENST00000505915 627 ntBASIC5.03□□□□□ -1.6
SIX5Q8N196 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.03□□□□□ -1.6
SIX5Q8N196 RNU4-71P-201ENST00000516258 113 ntBASIC5.03□□□□□ -1.6
SIX5Q8N196 RNA5SP360-201ENST00000516555 118 ntBASIC5.03□□□□□ -1.6
SIX5Q8N196 RNU5B-3P-201ENST00000516601 115 ntBASIC5.03□□□□□ -1.6
SIX5Q8N196 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.03□□□□□ -1.6
SIX5Q8N196 FAM27B-201ENST00000610601 213 ntBASIC5.03□□□□□ -1.6
SIX5Q8N196 AC137590.2-201ENST00000619709 240 ntBASIC5.03□□□□□ -1.6
SIX5Q8N196 AC019206.1-201ENST00000621938 425 ntBASIC5.03□□□□□ -1.6
SIX5Q8N196 AC007785.2-201ENST00000598627 1916 ntBASIC5.03□□□□□ -1.6
SIX5Q8N196 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.03□□□□□ -1.6
SIX5Q8N196 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SIX5Q8N196 AC009541.1-201ENST00000438279 2662 ntBASIC5.02□□□□□ -1.61
SIX5Q8N196 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.02□□□□□ -1.61
SIX5Q8N196 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SIX5Q8N196 HSPA8P1-201ENST00000425843 1833 ntBASIC5.02□□□□□ -1.61
SIX5Q8N196 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.02□□□□□ -1.61
SIX5Q8N196 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
SIX5Q8N196 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.02□□□□□ -1.61
SIX5Q8N196 AC233981.2-201ENST00000611524 1614 ntBASIC5.02□□□□□ -1.61
SIX5Q8N196 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SIX5Q8N196 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SIX5Q8N196 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.02□□□□□ -1.61
SIX5Q8N196 snoU2_19.2-201ENST00000363024 80 ntBASIC5.02□□□□□ -1.61
SIX5Q8N196 RNU6-527P-201ENST00000363425 104 ntBASIC5.02□□□□□ -1.61
SIX5Q8N196 RNU4-9P-201ENST00000364951 139 ntBASIC5.02□□□□□ -1.61
SIX5Q8N196 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SIX5Q8N196 RNU6-72P-201ENST00000384285 79 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms